current user: public

If you have questions about the server, please let us know.

Query: [W] KOG1574 Predicted cell growth/differentiation regulator, contains RA domain, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .
# Score Template Links and tools%idFirst MELKINIDGLERSVSGVTDTTTCSQIIYALAHATSQRGRFVMVEKYRNVERRLAPTDRPLETLRKWREHAANVTFQMLRVDQNDEICDLVDESVPLEPAKPYFHPKQTSTSSMVTSLPGRSAAGQQQLENGQRSTSSLPTYASAGGVTGTLGRNTRRPPPPDYMSVMEKKNITMGAATIPQKDDFDCFKRADVKKLSETMNQQEVAEYLVQEEELRQLLKQQKNLRAILKPMIAANWPQQYQLELKKSHKLKASLAATKEAINKTRSDILRVEETEKDLMKKLAEFKKQDENGDENSEVLETSFDLGCSGTSTPLTVIALast
1 -9.130sp|Q9P2N2|RHG28_HUMAN Rho GTPase-activating protein 28 OS=Homo sapiens GN=ARHGAP28 PE=2 SV=3  ali   13  2..IRVHAPLLSKMAIQLNNQTKAKDILAKFQYENSHGSNQRLYEIGGNIEHCLDPDAYILDVYRI----NPQAEWVIKPQQSS............................................................................................................................................................................................................................................ 88
2 -8.840sp|Q6ZVD8|PHLP2_HUMAN PH domain leucine-rich repeat-containing protein phosphatase 2 OS=Homo sapiens GN=PHLPP2 PE=1 SV=3  ali   20  4.............LVLCTVETPASEICAGEGRES------LYLQLHGDLVRRLEPTERPLQILSRLGATNPDLGCMI.................................................................................................................................................................................................................................................. 75
3 -6.570sp|O60674|JAK2_HUMAN Tyrosine-protein kinase JAK2 OS=Homo sapiens GN=JAK2 PE=1 SV=2  ali   10  5..LQVYLKSEADYLTFPSGEYVAEEICIAASKACG----FALMS--ETERIWYPPN----HVFHIDESTRHNVLYRIR................................................................................................................................................................................................................................................. 83
4 -5.970tr|E9PQE9|E9PQE9_HUMAN Uncharacterized protein OS=Homo sapiens GN=TYK2 PE=4 SV=1  ali   17  1M-LKVLLGGGEPWVTFSESSLTAEEVCIHIAHKVVETGFHHVSQD-----DLLTSWSAHLSLPKCW-DYRREPLRPADR................................................................................................................................................................................................................................................ 81
5 -5.490tr|D6R9J1|D6R9J1_HUMAN Uncharacterized protein OS=Homo sapiens GN=TSC22D3 PE=4 SV=1  ali   21  48....VAIDNEQAMVSGITASFSSPDLAAA----------YVTLGRIEGMEKALSQNPEEADSL................................................................................................................................................................................................................................................................ 99
6 -5.410sp|P23458|JAK1_HUMAN Tyrosine-protein kinase JAK1 OS=Homo sapiens GN=JAK1 PE=1 SV=2  ali   12  1.EVIFYLSDREPLR--GSGEYTAEELCIRAAQACR----FALYDEWYAPNRTITVDD----------KMSLRLHYRMR................................................................................................................................................................................................................................................. 74
7 -5.360sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=3  ali   11  67..FVLTENGLSLILFGLTQEEFLNRLM--IHGSASTVDTLCHLNGWGRCSIPIHALEAGIE------RQLDTVNFFLK................................................................................................................................................................................................................................................. 135
8 -5.150sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF PE=1 SV=3  ali   18  81LENNIWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWRES.............................................................................................................................................................................................................................................................................. 137
9 -5.080sp|Q96ER9|CCD51_HUMAN Coiled-coil domain-containing protein 51 OS=Homo sapiens GN=CCDC51 PE=1 SV=2  ali   37..............................................................................................................................................................................................................................................NEVREAQGKVTEAEKVFMVARGLVREAREDLEVHQAKLKEVRDRLDRVSRELATLEHRMLQEEKRLRTAYLRAEDSER... 120
10 -5.050sp|P0C7X3|CCYL3_HUMAN Putative cyclin-Y-like protein 3 OS=Homo sapiens GN=CCNYL3 PE=2 SV=1  ali   12  15SPLSSQPVLGALSLAEVLPQEIKQEIHQVLMDEDSTLERFLVLHSIQGLQ-----EDSVLCKVEI---LSPQPQTYQSHFRS............................................................................................................................................................................................................................................. 104

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 2 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rodrigues AP, Rychlewski L, Wilson IA, Lesley SA, Godzik A. The challenge of protein structure determination--lessons from structuralgenomics. Protein Sci. 2007 Nov;16(11):2472-82.