Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: [L] KOG1978 DNA mismatch repair protein - MLH2/PMS1/Pms2 family, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .  650    .  660    .  670    .  680    .  690    .  700    .  710    .  720    .  730    .  740    .  750    .  760    .  770    .  780    .  790    .  800    .
# Score Template Links and tools%idFirst MSQNKIERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSGIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTRASDTEIGTRLTYDHSGNIICRQSAARELGTTIIVNKLFETLPVRRKELERSQKREFVKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIARKIENSKIGSGLIPIQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMNLSQQSFSNASFMSSKSSTPDDFNNTTLNSTYPEDSLLNTSDLLKQRKENRSPPAKKSCPMIRRTEPFHSVPSTSNSRTQRLENFSFTMEPKRVEVSKKIPSKSDKKLTDEELRSAVIEENPLKKAGEIDDIEILEQSQESQDVNESQCSQDSQTSQNSRVSYFTLRPQQKIKFSMKLLREAYSPKTDETDDNTEEAEVSAEKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEFSENDGCIKTFLTARPELLNQQLTNSDLEEILAVVSQYPNQMYRPVRIRKIFASKACRKSVMIGKPLNQREMTQIIRHLAKLDQPWNCPHGRPTIRHLASLPDRAEFELast
1 -3.540sp|Q8IWB6|TEX14_HUMAN Testis-expressed protein 14 OS=Homo sapiens GN=TEX14 PE=2 SV=2  ali   11  2........FSYDLLKKIDSPQRLVYSPSWCGGLVQGNPNGSPNRL---LKAGVISAQNIYSFGFG----------------KAMPWFQLTGATQMAY----LGSLPVIGEKEVIQADDEPTFS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 95
2 -3.380sp|P0C7X3|CCYL3_HUMAN Putative cyclin-Y-like protein 3 OS=Homo sapiens GN=CCNYL3 PE=2 SV=1  ali   12  30...............EVLPQEIKQEIHQV---LMDHGVPCHYTCFLLHPEDSTLERFLVLHSIQGLQEDSVLCKVEIHGLSPQSHFRSPSLAELLRISGTCRNHFAGMQK....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 127
3 -3.370tr|E9PIK4|E9PIK4_HUMAN Uncharacterized protein OS=Homo sapiens GN=TP53I11 PE=4 SV=1  ali   15  5..............................................................GVGGEDDDGEV-----HRSKISQVIKFTIREPLGLRVWQFVSAVLFSGIAIMVSPHPQPLRSGPVWLPQPFSGSPEVPPPSWPLVQGPICQALGLPPR..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 101
4 -3.330sp|Q86WI1|PKHL1_HUMAN Fibrocystin-L OS=Homo sapiens GN=PKHD1L1 PE=2 SV=2  ali   9  88.......LVITQPVAAQPGQPFPQQPSVKATDSDGNCVSVGITALTLRA---------ILKDSNNNQVNGLSGNTTIPFSSCWANYTDL-TPLRTGFILDNVVGVES-RTFSLLAE................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 191
5 -3.030sp|Q5SR76|CJ093_HUMAN TPR repeat-containing protein C10orf93 OS=Homo sapiens GN=C10orf93 PE=2 SV=2  ali   7  1......RVLVALEMYSCNGLGLMDFTVPSLAQLVKMASECNWSDPLVELQ-----LTRLTHFAHAARDHETTMACAHRALEMGIKYLKKFGPEESRLVAEMLCTATAIQGRSIMENLKGRKQLRLVAAKAFTESARFGGIAGSSALVMLAARHYWNAAVYRKKAKGALKRLIGII...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 172
6 -2.980sp|Q9NV88|INT9_HUMAN Integrator complex subunit 9 OS=Homo sapiens GN=INTS9 PE=1 SV=2  ali   17  1.............................LKPLLSGSIPV--EQFVQTLEKHGFSDIKVEDTAKGLQEAETLIQIEEDSTHIICDNDEMLRVR---LRDLVLKFLQKF......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 78
7 -2.970tr|A6NMH3|A6NMH3_HUMAN Uncharacterized protein OS=Homo sapiens GN=TNNI3K PE=4 SV=1  ali   14  17.....................AITAADEKQELAYNQQLSEKLKRKEL---PLGVQYHVFVD-GNG---------------------------------GSTLCALQCLEK-----LYGDKWNSFTILLIHSVSFQIYQNALAKHP------VSFKAYWI...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 112
8 -2.920sp|Q63HN8|RN213_HUMAN RING finger protein 213 OS=Homo sapiens GN=RNF213 PE=1 SV=2  ali   10  9...........KTLHPLLEDGCIEDDPAPHKKVISNALDPAKMNRGIFVSRGSPNETELIESAKGICSSDILVQYFASFAKAYETVCKRQDKEFFGLR-DYYSLIKMVFAAAKASNRKPSPQDIAQAVLRNSGKDDIQAL------DIFLANLPEAKCSEEVSPMQLIKQNIFGPSQKVPGGEQEDAESRYLLVLTKNYVALQILQQTFFEGDQQPEI--IFGSGFPKDQEYLCRNINRVKICME--------------------------------------TGKMVLLLNLQNL-YESLYDALNQYYVHLGGQKY----VDLGLGTHRVKCRVHPNFRLIVIEEKDVVYKHFPIPLINRLEK......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 322
9 -2.850sp|Q8N7Z5|ANR31_HUMAN Ankyrin repeat domain-containing protein 31 OS=Homo sapiens GN=ANKRD31 PE=5 SV=2  ali   12  2.............................IKDLILLGRINPGNNILEFKTQETTHKASILLNGK-LKVESGQIYKNPVTWLKDLLGGNSYVTWNYAWSGKELLRYVS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 83
10 -2.840sp|Q9NU22|MDN1_HUMAN Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2  ali   12  10....................RLLEKVEGTVRALLRDSLLISADDAEVVLRAWSHFLLTYKPKCLGVNKLEAVLLLMQRLNNKINSYCEFAKL......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 93
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.