current user: public
If you have questions about the server, please let us know.

Query: [S] KOG2827 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500
# Score Template Links and tools%idFirst MSATKHNERVGRRNDRKRDASQACLPERSPSLRSEPRQQRSHPYLQTRTNTHRQRPMIRPSSVVSMSGRSIAPSDSSENDDRHFDVDEEMESMSLDSPLPIEVPARPFPDKPYYWMNDYKTLEFIRTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKYSFHLRVRGGKGGFGSLLRSFRVNKSTNKLMMRDLNGRRMASVDEEAKLKRYLEKQARKEQELKEKRKAKLEKLTAGPAKHMFEDQDYLSRREEIINKTEDACEAGFALMLEMKRNSRKSKEQENKNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIGEDGGNKRINDESDDSEDDSENEVDPEELEAIRQYFEAKKQDEKDNGEGTSEAVPEVLVDEQEIEPAKRPRLDSASNIDDLPKIDVKTPCEYGPISLDDFTSAEDLELLGLEHLKSALNDRGLKCGGSLVERAARLWCVKGKQPREYPKNILTPELKKKIAEEEEAERKAAKKAKKSKKNQLast
1 -5.820sp|Q5W0U4|BSPRY_HUMAN B box and SPRY domain-containing protein OS=Homo sapiens GN=BSPRY PE=2 SV=1  ali   16  13................................................................................................................................................................................VLPGKNQRAVSMASAARELVIQRLSLVSEEQRLLEQVHGEEERAHQSILTQRVHWAEALQKLDTTHLDDLQLIQKEQEIFERTEEA.............................................................................................................................................................................................................................................. 112
2 -5.690sp|A6NCL1|GEMC1_HUMAN Geminin coiled-coil domain-containing protein 1 OS=Homo sapiens GN=GMNC PE=3 SV=2  ali   17  4................................................................................................................................................................................................................................................................................................................................................................................................................................SEFANCEEQAGPPVD-----LQTLGLKDLDTIDDTSS............................................... 38
3 -5.660sp|Q7Z695|ADCK2_HUMAN Uncharacterized aarF domain-containing protein kinase 2 OS=Homo sapiens GN=ADCK2 PE=2 SV=1  ali   12  45..............................................................................................................................................................................................................................................................................................................................................................................................................................................HLLLKATETSGIKLGQWASTRR-----------DLFSEAFCAQFSKLHVRVTPHPWTHTERFLRQ..... 101
4 -5.010sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3  ali   20  21..............................................................................................................................................................................................................................................................................................................................................................................................................................QLTCTPGSGELGRI--ESQKGALQGRDAVCSGQAAARARRFSGLSAELRNQLDVAKVS............................ 81
5 -4.980sp|Q6V702|CD022_HUMAN Uncharacterized protein C4orf22 OS=Homo sapiens GN=C4orf22 PE=2 SV=4  ali   33  24...............................................................................................................................................................................................................................................................................................................................................................................................................................LDSQITTVDLYYLEDETLARQLVELGYRGTGERVKR................................................. 59
6 -4.860tr|F8VV50|F8VV50_HUMAN Uncharacterized protein OS=Homo sapiens GN=TSPAN19 PE=4 SV=1  ali   14  1................................................................................................................................................................................................................................................................................................................................................................................................................................................VVESRSVTRLECSGTISAHCN............................................... 21
7 -4.800sp|Q9NWR8|C109B_HUMAN Coiled-coil domain-containing protein 109B OS=Homo sapiens GN=CCDC109B PE=1 SV=2  ali   12  51...............................................................................................................................................................................................................................................................................................................................................................................................................................YSTVVPPDEITV-GLPLVTLTLPSRKERCQFVVKPMLSTV............................................. 93
8 -4.680sp|Q6IQ49|CA055_HUMAN UPF0667 protein C1orf55 OS=Homo sapiens GN=C1orf55 PE=1 SV=1  ali   22  28..................................................................................................................TVRDFIHRHCQDQNVPVENFFVKCNGALINTSDTVQ.............................................................................................................................................................................................................................................................................................................................................................. 63
9 -4.570sp|Q8IYW2|CJ092_HUMAN Uncharacterized protein C10orf92 OS=Homo sapiens GN=C10orf92 PE=2 SV=2  ali   11  14.................................................................................................................................................................................LLSLQDLQNVNTPLMRKLARLKLGLVEMALDMLQFIWEEAHGQQSEQGSLEKLLADYLQNTSDYTSVGLQWFTLKRTLAHGALAQLGS........................................................................................................................................................................................................................................... 101
10 -4.380sp|Q5JRC9|FA47A_HUMAN Protein FAM47A OS=Homo sapiens GN=FAM47A PE=1 SV=3  ali   22  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................DLYGPIAFKDFILSKGYEMPGIIQ----RLFARRGWTYDSVKTPIQRAMIFYKYKEIVEASEE............ 59
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.