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Query: [C] COG1145 Ferredoxin, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MHHSHHLEIYEKLREKLNKAPIGLPKTVSGVEKELLSVLFDEEEAKIAVHMPFIRFTAEQLAERTGKSLEYVEKILNEMAKKGTVWKGEKDGQTYYRLFPVIVGFAETPFWPGPGKDPRQEKLARLWSQYRKEGFLDEIGDREHPIMRALPERDTISEKSEILPYEDAVKLVKERDYIAVGYCPCRVMARLVGEGCRHSIENCIHMGSVGKYMVEHGLGRRISADEAIEILRQSNREGLVHLTERSKHVATICNCCSDCCVFFKAVHEAKHPNTIAHSSYLATVDTSRCIACGICMLRCPMKAIKAKINREPASVDAEKCLGCGVCVPTCPMEAIELVERDELLELPDGMTYVQELLADKGRDPSGLFLast
1 -29.1005c4i_B mol:protein length:315 Oxalate oxidoreductase subunit delta  ali model follow..  24  250.....................................................................................................................................................................................................................................................................................RIQRPIIDREACTECYTCWIYCPDSCITRTEEG--PVFNMKYCKGCGLCTAVCPSGALTNVPELDFKD....................... 315
2 -28.1001jnr_B mol:protein length:150 adenylylsulfate reductase  ali model follow..  24  2........................................................................................................................................................................................................................................................................................PSFVNPEKCDGCKACEYICPNDLMTLDKEKMKAYREPDMCWECYSCVKMCPQGAIDVRGYVD.......................... 69
3 -27.8003gyx_B mol:protein length:166 Adenylylsulfate Reductase  ali model follow..  24  2.........................................................................................................................................................................................................................................................................................TYVDPSKCDGCKACMYICPNDLMILDPEEMKAFNEPEACWECYSCIKICPQGAITARPYADFAPMGGTCIPLRG............. 81
4 -25.8005t5i_G mol:protein length:82 Tungsten formylmethanofuran dehydrogenase subunit fwdG  ali model follow..  28  2......................................................................................................................................................................................................................................................................................AIGLKAYPELCHGCGNCVIACPVNALRSPEVAVVNIKNPDLCGKCGTCVESCPVDAIRLEELE........................... 82
5 -25.8002vkr_A mol:protein length:103 ZINC-CONTAINING FERREDOXIN  ali model follow..  27  35......................................................................................................................................................................................................................................................................................GTIVGVDFDLCIADGSCITACPVNVFQWYDTPGADPINEQACIFCMACVNVCPVAAIDVKP............................. 102
6 -25.2001xer_A mol:protein length:103 FERREDOXIN  ali model follow..  29  35......................................................................................................................................................................................................................................................................................GTIVGVDFDLCIADGSCINACPVNVFQWYDTPGADPVNEQACIFCMACVNVCPVAAIDVKP............................. 102
7 -25.1006cfw_N mol:protein length:139 NADH-plastoquinone oxidoreductase subunit  ali model follow..  18  36......................................................................................................................................................................................................................................................................................RGKLVYNVDKCVGCRMCVTVCPAGVFVYLPEIRKVTLWIGRCVMCKQCVDVCPTAALQMSDEFLLASYDKY................... 106
8 -24.8006gcs_I mol:protein length:229 TYKY SUBUNIT (NUIM)  ali model follow..  32  126............................................................................................................................................................................................................................................................................................GEERCIACKLCEAICPALAITIDAEERKYDIDMTKCIYCGYCQESCPVDAIVETPNVEYATETRE................... 198
9 -24.4005zji_C mol:protein length:81 photosystem I subunit VII  ali model follow..  18  3........................................................................................................................................................................................................................................................................................HSVKIYDTCIGCTQCVRACPTDVLEMIPWDGASAPRTEDCVGCKRCESACPTDFLSVRVYLGPETTRSM................... 77
10 -24.3006g2j_I mol:protein length:212 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial  ali model follow..  32  109............................................................................................................................................................................................................................................................................................GEERCIACKLCEAICPAQAITIEAEPRRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHE................... 181
11 -24.2002wsc_C mol:protein length:81 PHOTOSYSTEM I IRON-SULFUR CENTER  ali model follow..  19  3........................................................................................................................................................................................................................................................................................HSVKIYDTCIGCTQCVRACPTDVLEMIPWGGASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRS.................... 76
12 -24.2004kt0_C mol:protein length:81 Photosystem I iron-sulfur center  ali model follow..  20  3........................................................................................................................................................................................................................................................................................HSVKIYDTCIGCTQCVRACPLDVLEMVPWDGASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSM................... 77
13 -24.1001k0t_A mol:protein length:80 PSAC SUBUNIT OF PHOTOSYSTEM I  ali model follow..  20  3.........................................................................................................................................................................................................................................................................................SVKIYDTCIGCTQCVRACPLDVLEMVPWDGASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRS.................... 75
14 -24.0005gpn_b mol:protein length:212 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8  ali model follow..  32  109............................................................................................................................................................................................................................................................................................GEERCIACKLCEAVCPAQAITIEAEPRRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHE................... 181
15 -23.9005zgb_C mol:protein length:81 PsaC  ali model follow..  18  3........................................................................................................................................................................................................................................................................................HTVKIYDNCIGCTQCVRACPLDVLEMVPWDGASAPRTEDCVGCKRCETACPTDFLSIRVYLGGETTRSM................... 77
16 -23.9005t5i_F mol:protein length:349 Tungsten formylmethanofuran dehydrogenase subunit fwdF  ali model follow..  16  164......................................................................................................................................................................................CPVDAIEIDHQTPSSASPVVATDIRVDEDKCVHCGICKRICPVDAIMQVCRICPYGEYEIKTPEVTGTSYIDPELC-CGWCQEICPVDAATVTKPFEGELIIDQDTCQACETCVMVCPCNVLSFPKPEKKLHKDERFCIYCGACERSCPVTAITVKRNRINTTPIR.................... 336
17 -23.8001jb0_C mol:protein length:80 PHOTOSYSTEM I IRON-SULFUR CENTER  ali model follow..  20  3.........................................................................................................................................................................................................................................................................................TVKIYDTCIGCTQCVRACPTDVLEMVPWDGASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSM................... 76
18 -23.5002fug_9 mol:protein length:182 NADH-quinone oxidoreductase chain 9  ali model follow..  27  49............................................................................................................................................................................................................................................................................................GLEKCIGCSLCAAACPAYAIYVEPAENVYEINMLRCIFCGLCEEACPTGAIVLGYDFEMADYEYS................... 127
19 -23.2005lc5_I mol:protein length:176 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial  ali model follow..  32  73............................................................................................................................................................................................................................................................................................GEERCIACKLCEAVCPAQAITIEAEPRRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHE................... 145
20 -23.2005xtb_B mol:protein length:176 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial  ali model follow..  32  73............................................................................................................................................................................................................................................................................................GEERCIACKLCEAICPAQAITIEAEPRRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHE................... 145
21 -22.8001a6l_A mol:protein length:106 FERREDOXIN  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
22 -22.7001ftc_A mol:protein length:106 FERREDOXIN  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
23 -22.7001pc4_A mol:protein length:107 Ferredoxin I  ali model follow..  25  1........................................................................................................................................................................................................................................................................................MAFVVTDNCIKCTDCVEVCPVDCFY--EGPNFLVIHPDECIDCALCEPECAAQAIFSEDEVPED........................ 64
24 -22.6001ff2_A mol:protein length:106 FERREDOXIN I  ali model follow..  25  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCTDCVEVCPVDCFY--EGPNFLVIHPDECIDDALCEPECPAQAIFSEDEVPED........................ 63
25 -22.6001g3o_A mol:protein length:106 7FE FERREDOXIN I  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEECPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
26 -22.6001b0v_A mol:protein length:106 PROTEIN (FERREDOXIN)  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDECNDCALCEPECPAQAIFSEDEVPED........................ 63
27 -22.5001frm_A mol:protein length:106 FERREDOXIN  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDECIDCALCAPECPAQAIFSEDEVPED........................ 63
28 -22.5001fri_A mol:protein length:106 FERREDOXIN  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVNCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
29 -22.5001fd2_A mol:protein length:106 FERREDOXIN  ali model follow..  25  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCTDCVEVAPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
30 -22.4002v2k_A mol:protein length:105 FERREDOXIN  ali model follow..  25  1.........................................................................................................................................................................................................................................................................................TYVIAEPCVDVKACIEECPVDCIY--EGARMLYIHPDECVDCGACEPVCPVEAIYYEDDVPDQ........................ 63
31 -22.4001b0t_A mol:protein length:106 PROTEIN (FERREDOXIN I)  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKKCVEVCPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
32 -22.4002zvs_A mol:protein length:85 Uncharacterized ferredoxin-like protein yfhL  ali model follow..  20  1.........................................................................................................................................................................................................................................................................................ALLITKKCINCDMCEPECPNEAISMGDH--IYEINSDKCTECPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADK....... 84
33 -22.4001bqx_A mol:protein length:77 PROTEIN (FERREDOXIN)  ali model follow..  24  3.........................................................................................................................................................................................................................................................................................VITEPCIGTKCASCVEVCPVDCIHEGED--QYYIDPDVCIDCGACEAVCPVSAIYHEDF............................ 59
34 -22.4001g6b_A mol:protein length:106 7FE FERREDOXIN I  ali model follow..  25  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDECIDCALCESECPAQAIFSEDEVPED........................ 63
35 -22.3001gao_A mol:protein length:106 FERREDOXIN I  ali model follow..  28  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFYEGPNF--LVIHPDECIDCASCEPECPAQAIFSEDEVPED........................ 63
36 -22.3002fd2_A mol:protein length:106 FERREDOXIN  ali model follow..  28  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDAFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
37 -22.2001f5b_A mol:protein length:106 FERREDOXIN 1  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AHVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
38 -22.2001frl_A mol:protein length:106 FERREDOXIN  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIHPDSCIDCALCEPECPAQAIFSEDEVPED........................ 63
39 -22.2001f5c_A mol:protein length:106 FERREDOXIN 1  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCTDCVEVCPVDCHY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
40 -22.2001d3w_A mol:protein length:106 FERREDOXIN 1  ali model follow..  26  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKECVEVCPVDCFY--EGPNFLVIHPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
41 -22.1001frk_A mol:protein length:106 FERREDOXIN  ali model follow..  28  1.........................................................................................................................................................................................................................................................................................AFVVTDNCIKCKDCVEVCPVDCFY--EGPNFLVIDPDECIDCALCEPECPAQAIFSEDEVPED........................ 63
42 -21.9001rgv_A mol:protein length:80 ferredoxin  ali model follow..  28  1.........................................................................................................................................................................................................................................................................................ALYINDDCTACDACVEECPNEAITPGDP--IYVIDPTKCSECVQCRLVCPADCIPDNPD............................ 63
43 -21.9003eun_A mol:protein length:82 Ferredoxin  ali model follow..  30  1.........................................................................................................................................................................................................................................................................................ALMITDECINCDVCEPECPNGAISQGDE--TYVIEPSLCTECSQCVEVCPVDAIIKDPSHEE......................... 66
44 -21.7001blu_A mol:protein length:82 FERREDOXIN  ali model follow..  29  1.........................................................................................................................................................................................................................................................................................ALMITDECINCDVCEPECPNGAISQGDE--TYVIEPSLCTECSQCVEVCPVDCIIKDPSHE.......................... 65
45 -21.3001hfe_L mol:protein length:421 PROTEIN (FE-ONLY HYDROGENASE (E.C.1.18.99.1) (LARGER SUBUNIT))  ali model follow..  21  27........................................................................................................................................................................................................................................................................................FVQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENAIYEAQSWVPEVEKKLKDGKVKCIAMPAPAVRYAL 114
46 -21.2003exy_A mol:protein length:82 Ferredoxin  ali model follow..  27  1.........................................................................................................................................................................................................................................................................................ALMITDECINCDGCEPECPNGAISQGDE--TYVIEPSLCTECSQCVEVCPVDCIIKDPSHEETE--DELRAKYERITGEG....... 82
47 -21.2001fdn_A mol:protein length:55 FERREDOXIN  ali model follow..  36  1.........................................................................................................................................................................................................................................................................................AYVINEACISCGACEPECPVNAISSGDD--RYVIDADTCIDCGACAGVCPVDAPVQA.............................. 55
48 -21.2001clf_A mol:protein length:55 FERREDOXIN  ali model follow..  32  1.........................................................................................................................................................................................................................................................................................AYKIADSCVSCGACASECPVNAISQGDS--IFVIDADTCIDCGNCANVCPVGAPVQE.............................. 55
49 -21.0001fca_A mol:protein length:55 FERREDOXIN  ali model follow..  36  1.........................................................................................................................................................................................................................................................................................AYVINEACISCGACEPECPVDAISQGGS--RYVIDADTCIDCGACAGVCPVDAPVQA.............................. 55
50 -20.9002fgo_A mol:protein length:82 Ferredoxin  ali model follow..  23  1.........................................................................................................................................................................................................................................................................................SLKITDDCINCDVCEPECPNGAISQGEEI--YVIDPNLCTECPQCQQVCPVDCIPLDDANVESK--DQLMEKYRKITGKA....... 82
51 -20.8003zfs_B mol:protein length:275 F420-REDUCING HYDROGENASE, SUBUNIT GAMMA  ali model follow..  14  1...................................MSLIARIKRFLGLEAEAKREEPEKEKSEPVGASKEEVEKVAEENAKPRIGYIHLSG---------------------AMSLTENYDILAELLTNMVDIVYGQTLVDLWEMPEMDLALVEGSVCLQDEHSLHELKELREKAKLCAFGSCAATGCFTRYSRGGQQAQPS------------------HESFVPIADLIDVDLALPGCPPSPEIIAKTVVALLNNDMDYLQPMLDLAGYTEACGCDLQTKVVNQGLCIGCGTCAMACQTRALDM--TNGRPELNSDRCIKCGICYVQCPRSWWPEEQIKKEL........................ 273
52 -20.7001dur_A mol:protein length:55 2[4FE-4S] FERREDOXIN  ali model follow..  36  1.........................................................................................................................................................................................................................................................................................AYVINDSCIACGACKPECPVNCIQ---EGSIYAIDADSCIDCGSCASVCPVGAPNPED............................. 55
53 -20.6002ivf_B mol:protein length:352 ETHYLBENZENE DEHYDROGENASE BETA-SUBUNIT  ali model follow..  13  1.....................................................................................................................................................MTYVQDGNKSELRKAKRQLVTVIDLNKCLGCQTCACKNIWTKRPGTEHMRWNNV-DYERKGGGFLRGEPQPGVLPTLIDSGDDFQFNHKEVFYEGKGQTVHFHPTSKSTGKDPAWGYNWDEDQGGGKWPNPFFFYLARMCNHC-ACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEYPRIEKGIANACNRQCPGRVRAF 237
54 -20.5001bc6_A mol:protein length:77 7-FE FERREDOXIN  ali model follow..  28  1.........................................................................................................................................................................................................................................................................................AYVITEPCIGTASCVEVCPVDCIHEGEDQ--YYIDPDVCIDCGACEAVCPVSAIYHEDFVPEE........................ 63
55 -20.5004ydd_B mol:protein length:333 DMSO reductase family type II enzyme, iron-sulfur subunit  ali model follow..  19  134.............................................................................................................................................................................................................................................................................................PRMCNHC-ACLEACPNEAIYKREQDGIVVIHQDKCKGAQACVQSCPYAKPYFNPLTNKANFPRIEQGVAPACVAQCVGRAMHV 223
56 -20.3001h98_A mol:protein length:78 FERREDOXIN  ali model follow..  30  1.........................................................................................................................................................................................................................................................................................PHVICEPCIGVKSCVEVCPVECIY--DGGDQFYIHPEECIDCGACVPACPVNAIYPEEDVPEQ........................ 63
57 -19.4001kqf_B mol:protein length:294 FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SULFUR SUBUNIT  ali model follow..  18  1..........................................................................................................................................MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACACSEWNDIRDE--------------VGHCVGVYDNPADLSAKSWTVM--RFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGA----IIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRV----YKCTLC-ACVKTCPTGAIHFGTKKEMLELAEQRVAKLK............. 204
58 -18.5004z3w_E mol:protein length:179 Iron-sulfur cluster-binding oxidoreductase, putative benzoyl-CoA reductase electron transfer protein  ali model follow..  21  79.........................................................................................................................................................................................................................................................................................FIIDGKEYDECGFCRASCPSRDLFREPDSGLP----LKCDLCDLCVKWCLVGALSVTEREVEEPDESVKRTEME............. 153
59 -18.2004v4c_B mol:protein length:274 Pyrogallol hydroxytransferase small subunit  ali model follow..  10  1....................................................................................................................................................................MEQYYMVIDVAKCQDCNNCGCM-----------------------DEHELNEWPGYTASMQRGHRWMNERRERGTYPRNDINYRPTPCMHCENAPCVAK------GNGAVYQREDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVA----QKCTMC-RCAHNCGSFVYEFLKTTPEAMAKKVEEEGLEVIKPELGTKPRVY 187
60 -18.0002xsj_A mol:protein length:437 SULFITE REDUCTASE ALPHA SUBUNIT  ali model follow..  9  8LLDQLQSGPWPSFVADIKEE--AERRHSNQDNVEYQIPVDVCDDLLGILELKYSDGTTHWKHGGIVGVFGYGGGVIGRYCDQPQMFPGVAHFHTVRVAQPA-----------MYYTTDFLKQLCDLWDMR------------GSGLTNMHGATGDIV-----TTTPQLEEFYFELTHKMPASCLCEWAC--------------------------------YDAQELCYQMTQEYQDELHRPAFPYKFKFKFDGCPNGCVASIAAVAAYVGGEIQPNGGAHSGKDWGAFDIQKEVIDLCPTECMWMEDGK--LQINNRECTRCMHCLNVMPRALRIGNDR............................ 323
61 -18.0003mm5_B mol:protein length:366 Sulfite reductase, dissimilatory-type subunit beta  ali model follow..  13  3...................................VEGVKTDFGPPYFR---------DLLHPVIAKNYGKWKY--HEVVKPGVIKRVAESGDVIYVVRFGTPRLL---------SIYTVRELCDIADKYSDG---------------YLRWTSRNNVEFFVTDESKIDDLINEVQERVIVHTQCHTPA--------------------------------IDASGIVKAVMDELYEYFTDHKLPAMCRISLACCANMCGAV--HASDIAIVGIHRTPPIPNDEAIRKTCEIPSTVAACPTGALKPDMKNKTIKVDVEKCMYCGNCYTMCPGMPLFDPEND........................... 262
62 -17.7004xdc_A mol:protein length:584 Iron hydrogenase 1  ali model follow..  19  3..........................................................................................................................................................TIIINGVQFNTDEDTTILKFARDNNI--CKCEICTVEVEGT--GLVTACDT--------IEDGMIINTNSDAVNEK-----IKSRISQLLDIHEFKCGPCNRRENCEFLKLVIKYKARASVDERSKSLTVDRTKCLLCGRCVNACGTYAMKFLNKNGKTIIDDTNCLLCGQCIIACPVAALS................................ 206
63 -17.6003or1_A mol:protein length:437 Sulfite reductase alpha  ali model follow..  11  2............................AKHPTPMLDELEKGPWPSFVSDIKQECDNRAKNPKGLDYQIDDLLGILELSFHEGETHWKHGGIVGVFGYGGGVIGRYCFPGVAHFHTVRLAQPAAKYYTAEYLEAICDVWDLRGSGLTNMHGSTGDIV-----TQTPQLEEIFFEMTHNLPESCLCEFAC--------------------------------YDTQLMCYQLTQDYQDELHRPAFPYKFKFKFDGCPNGCVASMAAVKAYVGGEFKPNAGAHAGRDWGKFDIEAEVVGLCPTGCMTYESGT--LSIDNKNCTRCMHCINTMPRALKIGDER............................ 323
64 -17.5001q16_B mol:protein length:512 Respiratory nitrate reductase 1 beta chain  ali model follow..  14  1.................................................................................................................................................................MKIRSQVGMVLNLDKCIGCHTCTCKNVWTSREGVEYAWFNNVETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKSQPIARPRSLITGERACVATCPSGAIYKREEDGIVLIDQDKCRGWRMCITGCPYKKIYFNWKSGKSE....................... 242
65 -17.2005odc_A mol:protein length:654 Heterodisulfide reductase, subunit A  ali model follow..  20  535...............................................................................................................................................................................................................................................VYLAGACQGPKDIPASVAQGSAAASRAAIPLAKGEVEVEPIIASVDAEICGGCGVCVKQCPYGAPRLVEKDGKAEVISALCKGCGTCPAGCPSGALEQDHFKTI----QLFKQIEGMFRDTA....... 654
66 -16.9001h0h_B mol:protein length:214 FORMATE DEHYDROGENASE SUBUNIT BETA  ali model follow..  10  5..........................................................................................................................................................................FVDTTRCTACRGCACKQWHGNPATPTENTGFHQNPPDFNFHTYKLVRMHEQEIDGRIDWLFFPDQ-----------------CRHCIAPPCKATADMEDESAIIHDDATGCVLFTPKTLEDYESVISACPYDVPRKVAESNQM----AKCDMC-ACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAYSDAKL..... 189
67 -16.8002v4j_A mol:protein length:437 SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT ALPHA  ali model follow..  11  1.......................................MAKHATPKLDQLESGPWPS-SDIKQEAAYRAANPKGLDYQVPVDCPEDLLGVLELSYDIGRYCDQPEKFPGVAHFHTVRVAQPSGKYYSADYLRQLCDIWDLRGSGLTNMHGSTGDIV-----TQTPQLEEIFFELTHNLPESCLCEFAC--------------------------------YDSQAACYELTMEYQDELHRPAFPYKFKFKFDACPNGCVASIAAVKAYVAGEFKPNAGAHSGRDWGKFDIEAEVVNRCPSKCMKWDGSK--LSIDNKECVRCMHCINTMPRALHIGDER............................ 323
68 -16.5004ras_A mol:protein length:704 Oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein  ali model follow..  29  509.............................................................................................................................................................................................................................................................................................QDFCNQCRKCARECPCNAISFGDKYEIWKADVEKCTACGRCMKMCPWNREDTVEGRRLAELSIKVPEARAAIIA......... 597
69 -16.4003mm5_A mol:protein length:418 Sulfite reductase, dissimilatory-type subunit alpha  ali model follow..  11  6LLDELEKGPWPSFVKEIKKT--AELMEKAAAEGKDVKMPKGARGLLKQLEISYKDKKTHWKHGGIVSVVGYGGGVIGRYSDLGEQIPEVEHFHTMRINQP----------------------SGWFYSTKALRGLCDVWEKWGSGLTNFHGSTGDII-----TRSEYLQPCFEDLGNLEPSACMCEFAC--------------------------------YDTLELCYDLTMTYQDELHRPMWPYKFKIKCAGCPNDCVASKARAIIGTWKDDIKVDQEAVKEYASWMDIENEVVKLCPTGAIKWDGKE--LTIDNRECVRCMHCINKMPKALKPGDER............................ 306
70 -16.3004uqu_A mol:protein length:464 TETRACHLOROETHENE REDUCTIVE DEHALOGENASE CATALYTIC SUBUNIT PCEA  ali model follow..  15  139........................................DPVELT---------NYVKFAARMAGADLVGVAR-LNRNWVYSEAVTIPADVPYEQSLHKEIEKPIVFKDVPLPIETDDELIIPNTCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMFDMWLCQFIRYMGYYAIP--------SCNGVGQSVAFAVEAGLGQASRMCITPEFGPNVRLTKVFTNMPLVPDKPIDFGV------------------------------------------TEFCETCKKCARECPSKAITEGPRKLQWQNDYNKCLYCGVCVAVCPFTKGNIWIHDGVEWLIDNTRFLDPLMLGMDDA..... 423
71 -16.3005odc_C mol:protein length:184 Heterodisulfide reductase, subunit C  ali model follow..  21  30............................................................................................................................................................................................................................................................................................SLKACYQCGTCTGSCPSGRIRKALLGMDDVLDSDDCTTCYTCYERCPRDV----------KVTEIIKTIRNLAAQKGNM..... 110
72 -16.2002vpw_B mol:protein length:195 NRFC PROTEIN  ali model follow..  22  1....................................................................................................................................................................................................................................................................................MPRYAMAIDLSLCVGCAACVPVCPTGAS-YQTKDGLVLVDPKKCIACGACIAACPYDARYLHPAGYVSKAHRLEKGKVPACVETCPTYCRTF 142
73 -16.1006cz7_B mol:protein length:234 4Fe-4S ferredoxin, iron-sulfur binding domain protein  ali model follow..  28  2......................................................................................................................................................................................................................................................................................RLGMVIDLQKCVGCGGCSKVCPTGA-MHKDKRGLTLQNNDECIGCKKCMNACPYGVISF............................... 106
74 -16.0006fah_A mol:protein length:396 Caffeyl-CoA reductase-Etf complex subunit CarE  ali model follow..  25  3.........................................................................................................................................................................................................................................................................................IKVIEEKCIGCSKCQKSCPFDAITIENK---IAVIGDACTNCGTCIDVCPTEAILQEGTEKIVRDLSMYKGVWVFAEQRE....... 79
75 -15.1003cf4_A mol:protein length:807 Acetyl-CoA decarboxylase/synthase alpha subunit  ali model follow..  12  102............NGREFFLRVITGTACHAAHGRHLLDHLIEKYGEDLPLTLGQSNVLTPNITISTGLSPKTLGEV-QLTQLLATVHAGQESAEIDYDSKALFSGSLDHVGMEISDIVQVA-AYDFPKADPEAPLVEIGMGTIDKSKPFLCVIGHNVAGVTYMMDYMEDNNLTDKMEIAGLC-CTAIDLTRYKEADRRPPYAKVIGSMSKELKVIRSGMPDVIVVDERGDIVPEAQKLKIPVIASNPKIMYGLPNRTDADVDETMEELKSGKIPGCVMLDYDKLGELAKCADCGACLLACPEEGFAKKGDFSYFEEIHDTCIGCRRCEQVCKKE-IPILNVIEKIAQKQIAEEKGLMRAGRGQVSDAEI 502
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.