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Query: [E] COG2902 NAD-specific glutamate dehydrogenase, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGYRNNPKREKQIEKARQQAIAENVQFLDPGILYGRASADDIEYYSAEMLAASAAHSFEALSHWTGDAPHISITTVEGVSPRDIPVTVLTIIGRNMPFLYDSVMGEVTSSYRGLYLAVHPILVRDDEAQGYRLAEPEDDPAENISLIQLHIAPLTPQAASALEERLRFVLTQVQSAYRDWRPMLTKLDEALDELSKRGSSRRKTERTEAVEFLNWLRNDNFTFLGMRDYTYSGKGKNAKIERGDGVGLGSLSDPDVRVLRLGKNAVTTTPEILAFLDGPDFLIVTKANVKSIVHRRAYMDYIGIKRFDEDGNVIGELRIVGLFTATAYTRSVKQIPLLRAKVADVERHFGFDPNSHSGRILQNTLEAYPRDDLFQIETDLLIRFIEQIMELSDRPRVRVLARIDRFDRFVSAIIFVPREEYNSYVREKIGDYLSRVYDGHISAYYPAFPEGAVARVHFIVGRTEGKTPRIAQDKLEDAVSDIAARWIDHFVALSEPGAPVLDVDQAYQEAFTPEEAIGDMPDILAAANGEPVRIEFYQQEGQSDDTLSLKIFHRDGHLPLSRRVPLLENLGFNVISERTFDIGVVSEGEKRDIVLHDMELSVAAGTTLDLPHYGPKLEEAFLAAFSGKVDNDNFNRLILACGLNVREVSVLRAYARYLRQTGIVYSQEHISETLYKYPDISRNIFALFKAGFDPSIEEKKRVKKLAEIHKAIEAALSGVPNLDEDRTLRRYVNAIDATLRTNYFQKNADGTPRDLLAFKFDPKHLDGLPDPRPFREIFVYGTEVEGVHLRFGKVARGGLRWSDRGQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFFPKNLPAGGSRDEVFNAGREAYKTYIRTLLSITDNIVDDAIVPPADTLRLDGDDPYFVVAADKGTATFSDTANGLAHEAGFWLDDAFASGGSAGYDHKKMGITARGAWETVKRHFREMDTDIQTTPFTVAGVGDMSGDVFGNGMLLSEKIRLIAAFDHRDIFIDPDPDTDKSFAERKRLFELPRSSWQDYDRSTLSAGAMIISRSEKSVTLTPEAVAAIGLDKSVATPFEIMTAILKAPTDLLWFGGIGTYIKAAVETNAEVGDRANDPIRVNATELRAKVIGEGANLGITQKGRIAYALAGGRCNSDAIDNSAGVNSSDVEVNIKIALASAVNSGRLTMPKRNQLLASMTPDVAQLVLRNNYQQSLAISLTERLGLANREELGRLMGALEATGQLNRKVETLPNNAEFSERYASGKPLTRPEIGVLLSYAKLTLFDALVASPLPDEPYLQHLLLDYFPAKMQKNYANDIKAHRLHREIVATALANAVVNRGGPGFVQKLADASGLLAADVVKAAVIVEDGFGLKRLWTEVDALDGKVGGQVQNGLYATITRIFSDASRLYLQTGSAGAAAGDMATEIERLKTAIKTLSPAATKYRRELGVTEIDGVPSGLLEELDTLSLLVYVPEIMRIAESAGTTLARAAESYATVSSTFRVARLLDASQRITPADHYESLALLRSQDQISSSRRRIVISALTEYAKEKDPVQAWYAADRVRVNRIVSELGALSESGDTNLARLTVAAGLLGDIVQARLast
1 -22.3003r3j_A mol:protein length:456 Glutamate dehydrogenase  ali model follow..  14  4...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................YGYTSTKSVDNQIEELREKVVSKNKNEPEFLQAFEEVLSCLKPVFKKDNVYIG---VLENIAEPERVIQFRVPWINDKGEHKMNRGFRVQ--------------------------YNSVLGPYKGGLRFHPAVN--LSVIKFLGFEQIFKNSLLPMGGGKGGSDFDP------KGKSENEILKFCQSFMTNLFRYIGPNTD-------------------VPAGDIGVGGFGQYKKLKNSFEGVLTGKNIKWGGSNI----RAEATGYGVVYFAENVLKDLNDNLENKKCLVSGSGNVAQYLV--EKLIEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDI----KNNQRLRLKEYLKYSKTAKYFENQKP----------------------------------WNIPCDIAFPCATQ-NEINENDADLFIQN-----KCKMIVEGANMPTHIKALHKLKQNNIILCPSKAANAGGVAVSGLE------MSQNSMRLQWTHQETDMKLQNIMKSIYEQCHNTSKIYLNESDL---VAGANIAGFLKVADSFLEQGGL.................................................................................................................................................................................................................................................................................................................................................................. 456
2 -21.9006dhm_A mol:protein length:582 Glutamate dehydrogenase 1, mitochondrial  ali model follow..  14  3..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................PSVSGPVRAPLLRGLRPAAMYRCLGEALLLSRIGPAALGSVAADSAVLLGRARGQAAAAVAAPQPGLVPPARRHYSEAAA-----DREDDPNFFKMVEGFFDRGASIDKLVEDLKTRETEEQKRNRVRGILRIIKPCNHVLSLSF--EVIEGYRAQHSQHCKGGIRYSTDVS--VDEVKALASLMTYKCAVVPFGGAKAGVKINP------KNYTDNELEKITRRFTMELAKKG----------------FIGPGVDV--APDMSTGEMSWIADTYASTIGH--GKPISQGGIHG----RISATGRGVFHGIENFINEASYGFGDKTFAVQGFGNVGLHSM--RYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKL-----------------------------------QHGTILGFPKAKIYEGSILEV------------DCDILIPAASE---------KQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKN--LNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTI-------PIVPTAEFQDRISGASEKDIVHSGLAYTMERQIMRTAMKYNLGLDLRTAAYVNAIEK--VFRVYNEAGV.................................................................................................................................................................................................................................................................................................................. 579
3 -21.8005gud_A mol:protein length:471 Glutamate dehydrogenase  ali model follow..  14  15...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EFMTVDEQVSNYYDMLLKRNAGEPEFHQAVAEVLESLKIVLEKDPHYADYGLIQRLCE--ERQLIFRVPWVDDQGQVHVNRGFRVQ--------------------------FNSALGPYKGGLRFHPSVN--LGIVKFLGFEQIFKNSLLPIGGGKGGSDFDP------KGKSDLEIMRFCQSFMTELHRHIGEYRD-------------------VPAGDIGVGEIGYLFGHYRRMANQ--GKGLTWGGSLV----RTEATGYGCVYFVSEMIKAKGESISGQKIIVSGSGNVATYAI--EKAQELGATVIGFSDSSGWVHTPNGVDVAKLREIKE------------------VRRARVSVYADEIE-----------GATYHTDGSIWDL------------KCDIALPCATQ------NELNGENAKTLADNGCRFVAEGANMPSTPEAVEVFRERDIRFGPGKAANAGGVATSALE------MQQNASRDSWSFEYTDERLQVIMKNIFKTCAETAAEYGHENDY---VVGANIAGFKKVADAMLAQGVI.................................................................................................................................................................................................................................................................................................................................................................. 463
4 -21.7005k12_A mol:protein length:558 Glutamate dehydrogenase 1, mitochondrial  ali model follow..  14  32......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................WARGQPAAAPQPGLVPPARRHYSEADREDDPNFFKMVEGFFDRGASIDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSF--EVIEGYRAQHSQHCKGGIRYSTDVS--VDEVKALASLMTYKCAVVPFGGAKAGVKINP------KNYTDNELEKITRRFTMELAKKG----------------FIGPGV--VPAPDMSTGEMSWIADTYASTIGH-TGKPISQGGIHG----RISATGRGVFHGIENFINEASYGFGDKTFVVQGFGNVGLHSM--RYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKL-----------------------------------QHGTILGFPKAKIYEGSILEV------------DCDILIPAASE---------KQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKN--LNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTI-------PIVPTAEFQDRISGASEKDIVHSGLAYTSARQIMRTAMKYNLGLDLRTAAYVNAIEKV............................................................................................................................................................................................................................................................................................................................. 546
5 -21.5001bvu_A mol:protein length:418 PROTEIN (GLUTAMATE DEHYDROGENASE)  ali model follow..  17  1..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VEQDPFEIAVKQLERAAQYMDISEEALEFLKRPQRIVEVSI--KVFTGFRVQYNWATKGGIRWHPEET--LSTVKALAAWMTWKTAVLPYGGGKGGVICNP------KEMSDREKERLARGYVRAIYDVISPYTD-------------------IPAPDVYTNEYETISRRKDPSFGVITGKPPSVGGIVA----RMDATARGASYTVREAAKALGMDLKGKTIAIQGYGNA-GYYMAKIMSEEYGMKVVAVSDTKGGIYNPDGLNADEVLAWKK----KTGSVKDFPGATNITNEELLELE------------------------------------------VDVLAPSAIE---------EVITKKNADNIKAKIVAELANGPTTPEADEILYEKGILIIPDFLCNAGGVTVSYFE------WVQNITGDYWTVEETRAKLDKKMTKAFWDVYNTHKEKNINM-----RDAAYVVAVSRVYQAMKDRGWIKK................................................................................................................................................................................................................................................................................................................................................................ 418
6 -21.3001v9l_A mol:protein length:421 glutamate dehydrogenase  ali model follow..  15  3...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RTGFLEYVLNYVKKGVELGGFPEDFYKILSRPRRVLIVNI--EVFEGYRVQHCDVYKGGVRFHPEVT--LADDVALAILMTLKNSLLPYGGAKGAVRVDP------KKLSQRELEELSRGYARAIAPLIGDVVD-------------------IPAPDVGTNIMAWMVDEYSKIKGY--SKPPELWGNPV----REYATGFGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWTA--YWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKG----LTGPALVELFTTKDNAEFVKNPDA------------------------------------IFKLDVDIFVPAAIE---------NVIRGDNAGLVKARLVVEGANGPTTPEAERILYERGVVVVPDILANAGGVIMSYLE------WVENLQWYIWDEEETRKRLENIMVNNVERVYKRWQREKGW----TMRDAAIVTALERIYNAMKIRGWI.................................................................................................................................................................................................................................................................................................................................................................. 421
7 -21.1001aup_A mol:protein length:449 NAD-SPECIFIC GLUTAMATE DEHYDROGENASE  ali model follow..  15  1........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SKYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVI--ERVIEFRVPWEDDNGKVHVNTGYRVQ--------------------------FNGAIGPYLGGLRFAPSVN--LSIMKFLGFEQAFKDSLLPMGGAKGGSDFDP------NGKSDREVMRFCQAFMTELYRHIGPDID-------------------VPAGDLGVGEIGYMYGQYRKIVGG--GKARSFGGSLV----RPEATGYGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGAA--KKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYML--------------------------EMRASGRNKVQDYADKFGVQFFPGEKPWGQ------------KVDIIMPCATQ-NDVDLEQAKKI-----VANNVKYYIEVANMPTTNEARFLMQQPNMVVAPSKAVNAGGVLVVGFE------MSQNSERLSWTAEEVDSKLHQVMTDIHDGSAAAAERYGLGYNL---VAGANIVGFQKIADAMMAQG.................................................................................................................................................................................................................................................................................................................................................................... 446
8 -21.1001euz_A mol:protein length:419 GLUTAMATE DEHYDROGENASE  ali model follow..  18  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MVEIDPFEMAVKQLERAAQYMDISEEALEWLKKPMRIVEVSV--KVFTGFRVQHNWATKGGIRWHPAET--LSTVKALATWMTWKVAVLPYGGGKGGIIVNP------KELSEREQERLARAYIRAVYDVIGPWTD-------------------IPAPDVYTNEYETIMRRKGPAFGVITGKPLSIGGSLG----RGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNA-GYYTAKLAKEQLGMTVVAVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDF-----------------------------------GATNITNEELLEL------------EVDVLAPAAIE---------EVITEKNADNIKAKIVAEVANGPVTPEADDILREKGILQIPDFLCNAGGVTVSYFE------WVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIHM-----RDAAYVVAVSRVYQAMKDRGWVKK................................................................................................................................................................................................................................................................................................................................................................ 419
9 -20.6001hwy_A mol:protein length:501 GLUTAMATE DEHYDROGENASE  ali model follow..  14  2...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DREDDPNFFKMVEGFFDRGASIDKLVEDLKTRQTQEQKRNRVRGILRIIKPCNHVLSLSF--EVIEGYRAQHSHQCKGGIRYSTDVS--VDEVKALASLMTYKCAVVPFGGAKAGVKINP------KNYTDEDLEKITRRFTMELAKKGFIGPGVDV------------------APNMSTGEMSWIADTYASTIGH--GKPISQGGIHG----RISATGRGVFHGIENFIENMTPGFGDKTFAVQGFGNVGLHSM--RYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKL-----------------------------------QHGTILGFPKAKIYEGSILEV------------DCDILIPAASE---------KQLTKSNAPRVKAKIIAEGANGPTTPQADKIFLERNIMVIPDLYLNAGGVTVSYFQILKNL--------------GRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTSARQIMRTAMKYNLGLDLRTAAYVNAIEKV............................................................................................................................................................................................................................................................................................................................. 489
10 -20.6001l1f_A mol:protein length:505 Glutamate Dehydrogenase 1  ali model follow..  15  5..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ADREDDPNFFKMVEGFFDRGASIDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSF--EVIEGYRAQHSQHCKGGIRYSTDVS--VDEVKALASLMTYKCAVVPFGGAKAGVKINP------KNYTDNELEKITRRFTMELAKKGFIGPGIDV------------------APDMSTGEMSWIADTYASTIGH---HACVTGKPIGGIHGRISATGRGVFHGIENFINEASYGFGDKTFVVQGFGNVGLHSM--RYLHRFGAKCIAVGESDGSIWNPDGIDPKELEDFKL-----------------------------------QHGSILGFPKAKPYEGSILEA------------DCDILIPAASE---------KQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLKN--LNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTI-------PIVPTAEFQDRISGASEKDIVHSGLAYTSARQIMRTAMKYNLGLDLRTAAYVNAIEKV............................................................................................................................................................................................................................................................................................................................. 493
11 -20.6004xgi_A mol:protein length:436 Glutamate dehydrogenase  ali model follow..  18  2.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SMSSQSQSPSVAQSIPSYLHADDLGPWGNYLQQVDRVAPYLGSLSRWIETLKRPKRILIVDV--AHFEGYRVQHNVSGKGGVRYHQDVT--LSEVMALSAWMSVKNAAVPYGGAKGGIRVDP------RKLSRGELERVTRRYTSEIGIIIGPNTD-------------------IPAPDVNTNIMAWMMDTYSMNQGQ--GKPISLGGSLG----RKEATGRGVFVVGCEAAKKKGVEIEGARIAVQGFGNVGGIAA--KLFQEAGAKVIAVQDHTGTIHQPAGVDTAKLLDHVG----RTGGVAGFEGAEPMPNDEFWTVE------------------------------------------TEILIPAALE---------NQITEKNASKIRTKIIVEGANGPTTTAADDILSANGVLVIPDVIANAGGVTVSYFE------WVQDFSSFFWTEDEINHRLERVMREAFAGVWAVAEEHKVSV-----RTAAFIVACKRILMAREMRG.................................................................................................................................................................................................................................................................................................................................................................... 433
12 -20.5001gtm_A mol:protein length:419 GLUTAMATE DEHYDROGENASE  ali model follow..  17  1..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VEADPYEIVIKQLERAAQYMEISEEALEFLKRPQRIVEVTI--KVFTGFRVQHNWATKGGIRWHPEET--LSTVKALAAWMTWKTAVLPYGGGKGGIIVDP------KKLSDREKERLARGYIRAIYDVISPYED-------------------IPAPDVYTNEYETISRRKTPAFGIITGKPLSIGGSLG----RIEATARGASYTIREAAKVLWDTLKGKTIAIQGYGNA-GYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKN----EHGSVKDFPGATNITNEELLELE------------------------------------------VDVLAPAAIE---------EVITKKNADNIKAKIVAEVANGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFE------WVQNITGYYWTIEEVRERLDKKMTKAFYDVYNIAKEKNIHM-----RDAAYVVAVQRVYQAMLDRGWVKH................................................................................................................................................................................................................................................................................................................................................................ 419
13 -20.5001b26_A mol:protein length:416 GLUTAMATE DEHYDROGENASE  ali model follow..  17  3...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EKSLYEMAVEQFNRAASLMDLESDLAEVLRRPKRVLIVEF--EVFTGYRVQHNVAAKGGIRYHPDVT--LDEVKALAFWMTWKTAVLPFGGGKGGVRVDP------KKLSRNELERLSRRFFSEIQVIIGPYND-------------------IPAPDVNTNVIAWYMDTYSMNVGH--GKPVELGGSKG----REEATGRGVKVCAGLAMDVLGIDPKKATVAVQGFGNV-GQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKK----EHGTVVTYPKGERITNEELLELD------------------------------------------VDILVPAALE---------GAIHAGNAERIKAKAVVEGANGPTTPEADEILSRRGILVVPDILANAGGVTVSYFE------WVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKYNVDM-----RTAAYILAIDRVAYATKKRG.................................................................................................................................................................................................................................................................................................................................................................... 413
14 -20.5003aog_A mol:protein length:440 Glutamate dehydrogenase  ali model follow..  18  22...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DGGPWEIFTEQVDRVVPYLGRLAPLAESLKRPKRVLIVDV--AYFEGYRVHHNTAAKGGVRYHPEVT--LSEVMALAGWMTIKNAALPYGGGKGGIRVDP------RKLSPGELERLTRRYTSEIGILLGPDRD-------------------IPAPDVNTGEMAWMMDTYSMNVGR--GKPIALGGSLG----RRDATGRGVFITAAAAAEKIGLQVEGARVAIQGFGNVGNAAA--RAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQ----EFGGVRGYPKAEPLPAADFWGLP------------------------------------------VEFLVPAALE---------KQITEQNAWRIRARIVAEGANGPTTPAADDILLEKGVLVVPDVIANAGGVTVSYFE------WVQDFNSYFWTEEEINARLERVLRNAFEAVWQVAQEKKIPL-----RTAAYVVAATRVLEARALRG.................................................................................................................................................................................................................................................................................................................................................................... 431
15 -20.5002bma_A mol:protein length:470 GLUTAMATE DEHYDROGENASE (NADP+)  ali model follow..  13  25.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VDQEMNNVYERVMKLDPNQVEFLQAFHEILYSLKPLFMEEPKYLP---IIETLSEPERAIQFRVCWLDDNGVQRKNRCFRVQ--------------------------YNSALGPYKGGLRFHPSVN--LSIVKFLGFEQIFKNSLLSMGGGKGGSDFDP------KGKSDNEILKFCQAFMNELYRHIGPCTD-------------------VPAGDIGVGGYGQYKKIVNSFNGTLTGKNVKWGGSNL----RVEATGYGLVYFVLEVLKSLNIPVEKQTAVVSGSGNVALYCV--QKLLHLNVKVLTLSDSNGYVYEPNGFTHENLEFLID--------------------------LKEEKKGRIKEYLNHSSTAKYFPNEKPWGV------------PCTLAFPCATQ---------NDVDLDQAKLLQKNGVGEGANMPSTVDAINLFKSNNIIYCPSKAANAGGVAISGLE------MSQNFQFSHWTRETVDEKLKEIMRNIFIACSE--NALKYTKNKYDLQAGANIAGFLKVAESYIEQG.................................................................................................................................................................................................................................................................................................................................................................... 468
16 -20.5003k92_A mol:protein length:424 NAD-specific glutamate dehydrogenase  ali model follow..  15  15....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LNLFLSTQTIIKEALRKLGYPGDMYELMKEPQRMLTVRI--KVFTGYRSQHNDATKGGVRFHPEVN--EEKVKALSIWMTLKCGILPYGGGKGGIICDP------RTMSFGELERLSRGYVRAISQIVGPTKD-------------------IPAPDVYTNIMAWMMDEYSRLREF--GKPLVLGGSQG----RETATAQGVTICIEEAVKKKGIKLQNARIIIQGFGNAGSFLA--KFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRD-----------------------------------SFGMVTNLFTDVITNEELLEK------------DCDILVPAAIS---------NQITAKNAHNIQASIVVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFE------WVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQTAATHKVDM-----RLAAYMTGIRKSAEASRFRGWV.................................................................................................................................................................................................................................................................................................................................................................. 424
17 -20.5002yfh_A mol:protein length:448 GLUTAMATE DEHYDROGENASE, NAD-SPECIFIC GLUTAMATE DEHYDROGENASE, GLUTAMATE DEHYDROGENASE  ali model follow..  16  1.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSKYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVI--ERVIEFRVPWEDDNGKVHVNTGYRVQ--------------------------FNGAIGPYKGGLRFAPSVN--LSIMKFLGFEQAFKDSLLPMGGAKGGSDFDP------NGKSDREVMRFCQAFMTELYRHIGPDID-------------------VPAGDLGVGEIGYMYGQYRKIVGG-TGKARSFGGSLI----RPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAI--EKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEI----KASRDGRVADYAKEFGLVYLEGQQPWSLP-----------------------------------VDIALPCATQ---------NELDVDAAHQLIANGVKAVAEMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLE------MAQNAARLGWKAEKVDARLHHIMTDIHDGSAAAAERYGLGYNL---VAGANIVGFQKIADAMMAQG.................................................................................................................................................................................................................................................................................................................................................................... 445
18 -20.4005xvi_A mol:protein length:460 Glutamate dehydrogenase  ali model follow..  14  1.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSNLPHEPEFEQAYKELASTLENSTLFQKNPEYRKALAVVERVIQFRVVWEDDAGNVQVNRGFRVQ--------------------------FNSALGPYKGGLRFHPSVN--LSILKFLGFEQIFKNALLNMGGGKGGSDFDP------KGKSDNEIRRFCVSFMTELCKHIGADTD-------------------VPAGDIGVTGFGQYRKIRNQWEGVLTGKGGSWGGSLI----RPEATGYGVVYYVEHMIAHATNSFKGKRVAISGSGNVAQYAA--LKVIELGGSVVSLSDSQGSLIINGEGSFTPEIELIAQTKVERKQLASIVGA-------------------APFSDANKFKYIAGARPWVHVG------------KVDVALPSATQ-NEISGEEAQVL-----INAGCKFIAEGSNMGCTQEATANAGAAAIWYAPGKAANAGGVAVSGLE------MAQNSARLSWTSEEVDARLKDIMRDCFKNGLETAQEYATP-VLPSLVTGSNIAGFTKVAAAMKDQGDW.................................................................................................................................................................................................................................................................................................................................................................. 459
19 -20.3003k8z_A mol:protein length:423 NAD-specific glutamate dehydrogenase  ali model follow..  17  14...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KLDVLKSTQTVIHKALEKLGYPEEVYELLKEPMRLLTVKIPVRMDDGAHNDSVGPTKGGIRFHPNVT--EKEVKALSIWMSLKCGILPYGGGKGGIVCDP------RDMSFRELERLSRGYVRAISQIVGPTKD-------------------VPAPDVFTNIMAWMMDEYSRIDEF--GKPLVLGGSHG----RESATAKGVTICIKEAAKKRGIDIKGARVVVQGFGNAGSYLA--KFMHDAGAKVVGISDAYGGLYDPEGLDIDYLLDRRD-----------------------------------SFGTVTKLFNDTITNQELLEL------------DCDILVPAAIE---------NQITEENAHNIRAKIVVEAANGPTTLEGTKILSDRDILLVPDVLASAGGVTVSYFE------WVQNNQGFYWSEEEVEEKLEKMMVKSFNNIYEMANNRRIDM-----RLAAYMVGVRKMAEASRFRGWI.................................................................................................................................................................................................................................................................................................................................................................. 423
20 -20.2003aoe_E mol:protein length:419 Glutamate dehydrogenase  ali model follow..  16  11...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DPGLWDTYLEWLERALKVAGVHPTTLEYLAHPKRLVTLSL--RIFQGYRVVHDIAAKGGVRLDPGVT--LGQTAGLAAWMTLKAAVLPFGGAAGGIAVDP------KGLSPQELERLVRRYTAELVGLIGPDSD-------------------ILGPDLGADVMAWIMDTYSMTVGS-TGKPHALGGSEG----RDDAAGLGALLVLEALAKRRGLDLRGARVVVQGLGQVGAAVA--LHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGS--------------------------------------LPRLDLAPEEVFGL------------EAEVLVLAARE---------GALDGDRARQVQAQAVVEVANFGLNPEAEAYLLGKGALVVPDLLSGGGGLLASYLE------WVQDLNMFFWSPEEVRERFETRVARVVDAVCRRAERGGLDL-----RMGALALALERLDEATRLRG.................................................................................................................................................................................................................................................................................................................................................................... 416
21 -20.1004fcc_A mol:protein length:450 Glutamate dehydrogenase  ali model follow..  15  5......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVE--ERVIQFRVVWVDDRNQVQVNRAWRVQ--------------------------FSSAIGPYKGGMRFHPSVN--LSILKFLGFEQTFKNALLPMGGGKGGSDFDP------KGKSEGEVMRFCQALMTELYRHLGADTD-------------------VPAGDIGVGGAGMMKKLSNNTACVFTGKGLSFGGSLI----RPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAI--EKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEI----KSSRDGRVADYAKEFGLVYLEGQQPWSVP-----------------------------------VDIALPCATQ---------NELDVDAAHQLIANGVKAVAEMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLE------MAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEGEQT----NYVQGANIAGFVKVADAMLAQGVI.................................................................................................................................................................................................................................................................................................................................................................. 450
22 -19.9002yfq_A mol:protein length:421 NAD-SPECIFIC GLUTAMATE DEHYDROGENASE  ali model follow..  15  4...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TLNPLVAAQEKVRIACEKLGCDPAVYELLKEPQRVIEISI--KVFKGWRSAHSSASKGGVRFHPNVN--MDEVKALSLWMTFKGGALPYGGGKGGICVDP------AELSERELEQLSRGWVRGLYKYLGDRID-------------------IPAPDVNTNIMSWFVDEYVKLNGERMDIGTFTGKPVGGSEGRNEATGFGVAVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTV--KNIERQGGKVCAIAE-NYALYNENGIDFKELLAYKE----ANKTLIGFPGAERITDEEFWTKE------------------------------------------YDIIVPAALE---------NVITGERAKTINAKLVCEAANGPTTPEGDKVLTERGINLTPDILTNSGGVLVSYYE------WVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVADEYNVTL-----REAVYMYAIKSIDVAMKLRG.................................................................................................................................................................................................................................................................................................................................................................... 419
23 -16.5001bw9_A mol:protein length:356 PHENYLALANINE DEHYDROGENASE  ali model follow..  14  27...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VIRLDSTQLGPAAGGTRAAQNLADALTDAGKLAGAMTLKMAVLPMGGGKSVIALPAPRHSIDPST-WARILRIHAENIDKLSG--------------------------WTGPDVNTNS--ADMDTLNDTTEFVFGRSLERGGAGS----SAFTTAVGVFEAMKATVAHRLGSLDGLTVLVQGLGAVGGSLA--SLAAEAGAQLLVADTDTERVAHAV-----------------------------------------------------ALGHTAVALEDVLST------------PCDVFAPCA----------GGVITTEVARTLDCSVVAGAANNVIADEAASDLHARGILYAPDFVANAGGAIHLVGR-----------EVLGWSESVVHERAVAIGDTLNQVFEISDNDGVTPDEAARTLAGRRAREASTT............................................................................................................................................................................................................................................................................................................................................................................ 352
24 -16.4003vpx_A mol:protein length:364 Leucine dehydrogenase  ali model follow..  16  28...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IIAIHDTTLGPALGGTRMYASEEEAIEDALRLARGMTYKNAALNLGGGKTVIIGNP------KTDKNDEMFRAFGRYIEGL------------------------NGRYITAEDVGTTE--ADMDLINLETDYVTGTSAGAGSSGN----PSPVTAYGIYYGMKAAAKEAF-SLAGKTVAVQGVGNVAYALC--EYLHEEGAKLIITDINEEAVQRAVDAFGATAVGINEIYSQE----------------------------------------------------------------ADIFAPCA----------GAIINDETIPQLKAKVIAGSANNQLKETRHGDIHEMGIVYAPDYVINSGGVINVADELD------------GYNRERALKRVEGIYDVIGKIFAISKRDNIPTYVAADRMAEERIARVANT............................................................................................................................................................................................................................................................................................................................................................................ 349
25 -16.0001leh_A mol:protein length:364 LEUCINE DEHYDROGENASE  ali model follow..  15  28...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VIAIHDTTLGPALGGARMYNAEEEAIEDALRLARGMTYKNAALNLGGGKTVIIGDP------FADKNEDMFRALGRFIQGL------------------------NGRYITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGN----PSPVTAYGVYRGMKAAAKEASDSLEGLAVSVQGLGNVAKALC--KKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVT----------------------------------------------------------------CDIFAPCA----------GAVLNDFTIPQLKAKVIAGSADNQLKPRHGKYLHELGIVYAPDYVINAGGVINVADELY------------GYNRTRAMKRVDGIYDSIEKIFAISKRDGVPSYVAADRMAEERIAKVAKA............................................................................................................................................................................................................................................................................................................................................................................ 349
26 -14.3005zz8_t mol:protein length:3122 UL36  ali model follow..  13  604...................................................................................................TRMSLADVAAHRPLIQHLLDENSQIGRLALAKLVLVARDVIRETDAFLADLDLQLRAAPPANLYARLGEWLLERSRAHPN-EPLLHRIQALAQFARGEEMRVEAEEMREALDALARGVDSVSQRAGPLTVMPVPAAPGAGGRAPCPPALGPEAIQARLEDVRIQARRAIESAIKEYFHRGAVYSAKALQASDSHDCRFHVASAAVVPMVQLLESLP--AFDQHTRDVAQRAALPPPPPLATSPQAILLRDLLQRGQLTDAATQGLIERKPLEELARS-NDQQARRSSGLAELQRFDALDAALAQQLDSDAAFV--YVDGGGLSPEATRMAEDALRQARAMEAAKMTAELAPEARSRLR----------------ERAHALEAMLNDARERAKVAHDAR---EKFLHKLQGVLRP------LPDFVGLKACPAVLATLRASLPAGWTDLADAVRGPPPEVTAALRADLWGLLG--------------------------------------------QYREAL--------EHPTPDTATALAGLHPAFVVVL--------------------KTLFADAPETPVLVQFFSDH-----------------APTIAKAVSNAINAGSAAVATA-AATVDAAVRAH-----------GALADAVSALGAAARDPASPLSFLAALADSAAGY-TRLALEARGAI---DELTTLGSAAADLV---QARRACAQPEGDHAALI----DAAARATTAARESLAGHEAGFGGLLHA--EGTAGDHSPSGRALQELGK----VIGADELEAAVADLTAKMAAQRARGSSERWAAGVEAALDR----VENRAEFDVVERRLQALGYNPRD----------------AEQALAANAEAVTLALD-TAFAFNPYTPENQRHPMLPPLAAIHRLGWSAAFHAAAETYADMFRVDAEPLAR---LRIAEGLLEMAQAGDGFIEAVGRLADDMTSVPGLRRYVPFFQHGYADYVELRDDAIRADVH----RALG-GVPLDLAAAAQISAARNDPEATAELVRTGVTLPCPSEDALVACA-------AALERVDQSPVKNTAYAEYVAFVTRQDTAETKDAVVRAKQ--QRAEATERVMAGLR---------EALAARERRAQIEAEGLANLKTMLKVVAATVAKTLDQARSVAEIADQ----EVLLDQTEKTRELDVPAVIWLEHAQRTFETHPLSAARGDGPGP--LARHAGRLGALFDTRRRVDALRRSLEEAEAEWDEVWGRFGRVRGGAWKS---------------------------------PEGFRAMHEQLRALQDTTNTVSGLRAQPAYERLSARYQGVLGAKGA-ERAEAVEELGARVTKHTALCARLRDEV--------VRRVPWEMNFDAL--GRLLAEFDAAAADLAPWAVEEFRGARELIQ----YRMGLYSAYARAGGQTGAGAESAPAPLLVDLRALDARARA. 1909
27 -14.3005b37_A mol:protein length:361 Tryptophan dehydrogenase  ali model follow..  15  28...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IIAIHDTTLGPAMGATRIYINEEAALKDALRLSRGMTYKAACIPAGGGKAVIIA-------NPENKTDDLLRAYGRFVDSLNG-------------------------FITGQDVNIT--PDDVRTISQETKYVVGVSEKSGGPA--------ITSLGVFLGIKAAVESRSKRLDGMKVAVQGLGNVGKNLC--RHLHEHDVQLFVSDVDPIKAEEVKRLFGATVVEPTEIYSLD----------------------------------------------------------------VDIFAPCA----------GGILNSHTIPFLQASIIAGAANNQLENEQLHSLAKKGILYSPDYVINAGGLINVYNEMI------------GYDEEKAFKQVHNIYDTLLAIFEIAKEQGVTTNDAARRLAEDRINNSKRS............................................................................................................................................................................................................................................................................................................................................................................ 346
28 -12.0006cgr_n mol:protein length:3139 Large tegument protein deneddylase  ali model follow..  12  724VEAEDRQMREALDALARGVDAVSQHAGPLGVMPAPAGAAPQGAPRPPPLGPEAVQVRLEEVRTQARRAIEGAVKEYFYRGAVYSAKALQASDNNDRRFHVASLLESLPVFDQHTRDIAQPTAILLRD------LIQRGQTLDAPEDLAAWLSVLTDAANQGLIE--RKPLDELARSIRDINDQQARRSSGLAELRR---------FDALDAALGQQLDSDAAFVGASPY-PDDGGLSPEATRMAEEAL-----RQARAMDAAKLTAELAPDARARLRERARAMLEGARERAKVARDAREKFL-------QGVLRPLPDFVGL-CPAVLATLRASLPAGWSDLPEAVRGAPPEVTAALRADMWGLLGQY---DALEHPTPDTATALSGLHPSFVVVLKNLFADAPETPFLLQFFA-----DHAPIIAHAVSNAINAGSAAVATADPASTVDAAVRAHRVLVDA--------------TALGAAASDPASPLAFLAAMADSAAGYVKATRLALDARVAIAQLTTLGSAAADLVVQVRRAANQPEGEHASLIQAATRATTGARESLAGHEGRFGGLLHAE------TAGDHSPSGRALQELGIGATRRRADELEAATADLREKMAAQRARSSHERVLDRVESGAEFDVVELRRLQALAGTHGYNPRDFRKRAEQALGTNAKAVTLALETAL--AFNPYTPENQRHPMLPPLAADTYADMFRVDTEPLARLLRLAGGLLERAQANDGFIDYHEAVLH--------SEDLGGVPALRQYVPFFQKG--AEYVDIR------------DRLDALRADA------------------AIGSVALDLAAAAEEISAVRNDPAAAAELVRAGVTDALVACVAALERVDQSPVKDTAYADYVAFVTRQDLADTKDAVVRAKQQR------------AEATERVTAGLREVLAARERRAQLEAEGLANLKTLLKVVAVPATVAKT------LDQARSAEEIADQVEILVDQT--------EKARELDVQAVAWLEHAQRTFETHPLSAASGDGPGLLTRQGARLQALFDTRRRVEALRRSLEEAEAE--WDEVWGRFGRVRGGA------KSPEGFRAACEQLRALQDTTNTVSGLRAQ-RLPAKYQGV-LGAKSAERAGAVE----ELGGRV-------------AQHADLSARLRDEVVPRVAWEMNFDTLGGLLAEFDAVAGDLAPWAVEEFRGARELIQRRMGLYSAYAKATGQTGAGAAAAPAPLLVDLRALDARARASAPPGQEAD------------PQMLRRRGEAYLRVSGGPGPLVLREATSTLDRPFAPSFL-----VPDGTPLQYALCFPAVTDKLGALLMCPEAACIRPPLP................................................................................................................................................................................................................... 1999
29 -11.6005x6o_C mol:protein length:2368 Serine/threonine-protein kinase MEC1  ali model follow..  9  512..........................................................................................................................................................AAGKSEIFRILHSNFLSHPNIDEFSESLLSGILFSLHRIFSHFQPPKLTDGNGQINKSFKLVQK---------------MNSNRYLRLLSTRIIPLFNISDSHNSEDEHTATLIKFLQSQKLPVVKENLVIAWTQLTLTTSNDVFDTLLLKLIDIFNS-KTPYQLLSPILPVLLRQLGKNLVERKVGFQNLIELLGYSSKTILDIFQRYIIPYA----IIQYKSDVLSEIAKIMCDGDTSNQMKVNLLKKNSRQIFAVALVKHGLFSLDILETLFLNRAPTFDKGYITAYLPDYKTLAEITKLYKNSVTKDASDSENANMILCSLRFLITNFEKDKRHGSKYKNINNWTDDQ-TTYYEKLRVINGISFLIIYAPKKSIISALAQISICLQTGLGLKEVRYEAFRCWHLLVRHLNDEELTVIDSLIAFILQNGKLRNIVYSILDTLIKEKSDLILKLKPY-ARDGQFARMVNKIRSTTDLIPIFANNLKSSNKYVINLDDIEVYLRRKQTERSIDFTPKKVGQTSDITLVLGALLDT--------HKFRNLDKDLCEKCAKCISMIGVLDVTKHIKFLIWVINDIL-VPAFWQSENPSKQLFVALVIQE--------------------------LKYCGLSSESWDMNHKELYPNEAKLWEKFNSVSKTTIYPLLSSL--YLAQSWKEYVPLKYPSNNFKEGYKIWVKRFTDLLKTGTTENHPLHVFSSLIREDDPYISIIKAEKGTPYADILNGIIIEFDSIFTCNLEGMNNLQVDSLRMCYSIFRVFEYCKKWATEFIIKDTKTTNMLLRIDEFLRTT--PSDLLAQRSLETDSFERSALYLEDKNQNGQLLKNLQITY----EEIGDID----SLDGVLRTFATGNLV--KLAQDCFNVLGKFSDDPKTTTRMLKSMYDHQLYSQIISNSSFHSSDGKISLSPDVKEWYSIGLEAANLE---------------NVQTLKNWVEQIESLRNIDDREVLLQYNIAKALIAISNEDPLRTQKYHNSFRLIGTNFITSSKETTLLKKLLMKLHSLYDLSFLSSAKDKFEYKSNTTILDYRMERIGADFVPNHYQLKMNEQADADLGKTFTLAQLIASESLMHCLERRLPQAELEFAEILWKQGENDRALKIVQEIHEKYQENSSVNARDRAAVLLKFTEWLDLSNNSASEQIIKQYQDIFQIDSYSRLLERKKAEGYITNGRFEYRAISYFLLAFEKNTAKVRENLPKVITF----------LDIAAASISEAPGNRKEMLSKATEDICSHVEEALQHCPTYIWYFVLTQLLSRLLHSHQSSAQIIMHI--------LLSLAVEYPSHILWYITA---LVNSNSSKRVLRGKHILEKYRQHSQNPHDLVSSALDLTKALTR-VCLQDVKSITSRSGKS............. 1999
30 -11.4005zak_A mol:protein length:1922 Endoribonuclease Dicer  ali model follow..  11  50..............................................................................................................................................................................................................................................................................ELLEAALDHNTIVCLNTGSGKT--------FIAVLLTKELSYQIRGDFSRNVFL-------VNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKFTKHQVLIMTCYVALNVLKGYLSLSD----------------INLLVF---DECHLAILDHPYREIMKLCENCPSCPRILGLTASILN------------GKCDPEELEEKIQKLEKILKSNAETATDLVVLDRSQPCEIVVDCGPFTDRSGLRLLMELEEALNFINDCNISVHSKERDSTLISKQ-----ILSDCRAVLVVLGPWCADKVAGMMVRE---------LQKYIKHEQEELHRKFLLFTDTFLRKIHALC-----EEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQISSNFITGHGIGKNQMEAEFRKQEEVLRKFRAHE-----LLIATSIEGVDIPKCNLV---VRF-DLPTEYRSYVQSKGRARAPISNYI--------MLADT-----DKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIDPVMDDDDVFPPYVLRPDDGGPR----------------------------------VTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVG-------PPMSCVRLAERVVALICCEKKIGELDDHLMPVGKETVKYEEEHDEEETSVPGRPGSTKRRQCYPKAIPECLR---DSYPRPDQPCYLVLTTPLPDELNFRRRKLYPPEDTTRCFGILTA-----IPQIPHFPVYTRSGEVTISIELKKSGFMLSLQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHR-----FYVADVYTDLTPLSKFPSPEYET-FAEYY----KTKYNLDLTN--LNQPLLDNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIASLWRKAVCLPSILYRLHCLLTAEELRAQTASDA................................................................................................................................................................................................ 1078
31 -10.3005a22_A mol:protein length:2109 VESICULAR STOMATITIS VIRUS L POLYMERASE  ali model follow..  8  229...........................................................................................................................................................................NFLLMVKD--VIIGRMQTVLSMVCRIDNLFSEQDIFSLLNIYRIG-DKIVERQGNFSYDL--------IKMVEPICNLKLMKLARESRPLVPQFPHFENHIKTSVDEGAKIDRGIRFLHDQIMSVKTVDLTL--------------VIYGSFRHWGH-------PFIDEKLHSQVTMKKDIDVSYAKALASDLARIVLFQQFNDHKK--------------------------------------FVNGDLLPHDHPFKSHVKENTWPTAAQVQDFGDKWHELPLIKCFEIPD-----------LLDPSIIYSDKSHSMNRSEVLKHVR------------------------------------MNPNTPIPSKKVLQTMLDTKATNWKEFLKEIDEKGLD--------------------------------------------DDLIIGLKGKERELKLAGRFFSLMSWKLREYLIKTHFVPMFKGLTMADDLTAVIKKML-------------------DSSSGQGLKSYEAICIANHIDYEKWNNHQRKLSNGPVFRVMGQFL-PSLIERTHEFFEKSLIYYRPDLMRVHNNTLINSTSQRVCWQGQEGGLE---------GLRWT-----LNLLVIQREAKIRNTAVKVLAQGDNQVICTQYKTKKSRNVVELQGALNQMVSNNEKIMT------------------------------------------------------------------------------AIKIGTGKLGLLINDDE------------QSADYLNYGKIP----IFRGVIR--------GLETKRWSRVTCVTNDQIPTCANIMSSVSTNALTVAHFA-PALRQSLYEVQDKIPGLHSSTFKYAMLYLDPSI---GGVSGLIRAFPDPVTESLSFWRFIHVHARSEHLKEMSAVFGNPEIAKFRITHIDK----LVEDPTS-----------LNIAMGMSPANLLKTEVKKCLIESRQTIRNQVIKDATIYLYHEEDRLRSFLWSINPLFPRFLSEFKSGTFLGVADGLISLFQNSRTI--------------RNSFKKKYHRELDDLIVRSEVSSLTHLGKLHLRRGSCKMWTTHADTLRYKSWGRTVIGTTVPH--LEMLGPQHRKETPCAPCNTSGFNYVSVHCPDGI--LGSKTSESTSILQPWERESKVPLIKRATRLR-DAISWFVEPD------SKLAMTILSNIHSLTGEEWTKRQHGFKRTGSALHRFSTSRMSHGGFASQSTAALTRLMATTDT.................................................................................................................... 1256
32 -10.0005i8i_A mol:protein length:1829 Urea Amidolyase  ali model follow..  11  1......................................................................................................................................MESTLGWSVQDWLSFHSKSTPTKSLELLENLLKSQKPAPEDPAWISLIPVEDLHHQWNILQSKSNKEELP--------VPIAVKDNIDYKGL-SYLYQPTRDSYVVELLRDAGAVVIGKTNLDQFATGLVGTRSPYGKTPCVFNDKYVSGGSSAGSASVVGRGIVPLSLGTDTAGSGRVAALNNLIGLKPTKGAFSCRGVVPACKSIAFKVMNKPDLLEDEYSREFPKNPISQIPKEVPWFGETENPKLYTKAVASLKNTGAKIVVVDFEPLLELARCLYEGA---------------VAERYCATRDFLATNPPESSLDETVVNIIKGAVKFDAADAFKFEYKRQGILQKVNLLLKDIDVL-----KLEEVAQEPVLVNSRQGTWTNFVNLADLAALAVPSGFRSDGLPNGITL-IGKKFSDYALLDLAKRFFSNSRTYGKFVDRRITVEDELDGPSKDTLNGVKLAVVGAHLKGLPLHWQLQKCNATYLSSPKTSNNYKLYALPKVGPVLKPGLRRRFGDFIAMVPEPLGIGSVE--LESGEWVKSFICEEFGYTQQGTVDIEHIQVTEAQKKKPFETVLIANRGEIAVRIMKTLKRM----IKS-----------------------------------VAVYSPDKYSQHVTDADFS---LHGRTAAETYLDIDKIINAAKKTGAQAIIPG----GFL-------SENADFSDRCSQENIVFVDAIRKLGLKHSAREIAERAKV-----------LVPGSGLIKDAKEAKEVAKKLEYPV-KSTAGGGGIGLSEDDIERVFETVQHQGKSYFGDAGVFMER-EIQMM------GDGFGKAIAIGERDCSLQRRNQKVIEETPAPNLPEATRAKMRAASERLGSLLKYK----CAGTVEFIYDEQRLEVNARLQVEHPIT-EMVTGLDLVEWMLRI---------------AANDS-----DFDNTKIEVSGASIEARLYAENVKDFRPSPGQLTSVSFPSWARVDTWVKKGTNVSAEYDTLAKIIVHG---------KDRNDAIMKLNQALNETAV....................................................................................................................................................................................................................................................................................................................................................................................................... 1032
33 -9.8806gjc_A mol:protein length:3092 Fatty acid synthase  ali model follow..  10  486...................................................................................................IEQMAGLLEPRTYQFNALFLDPYLWKLQVGGKRLVQKARQSGAAIDGVVISAGIPDLDEAVELIDELGDIISHVVFKPGTIEQIRSVIRIATEV-------------PTKPVIMHVEGGR-----GHHSWEYSELRSRANITVCVGGGIGTPRRAAEYLSGRWAQAYGFPLMPIDGILVGTAAMATKESTTSPSVKRMLVDTQGTDQWISAGKAQG-----GMASSRSLDEVAGDAEAVAERRDEIIAA----------------MAKTAKPYFGDVADMTYLQWLRRYVELAIGEGNSTADTASVGSPWL-----------ADTWRDRFEQMLQR---------------------------------------AEARLHPQDFGPIQTLFTDAGLQQAIAALLARYPDAETVQLHPADVPFFVTLCKTLGKPVNFVPVIDQDVRR---SLWQAHDARYDADAVCIIPG-GITRMDEPVGELLDRFEQAAIDEVLGA-DVASRRLGRADVAGPLAVVLDAPDVRWAGRTVTNPVHRIADPAEWQVHDGPENPRATHSSTGARLQTHGDDVALSVPVSGTWVDIRFTLPANTVDGGTPVIATEDATSAMREFLPAVANGTATLTVDWHPERVADHTGVTATFGEPLAPSLTNVPDALVGPCWPAVFAAIGSAVTDTGEPVVEGLLSLVHLD------HAARVVGQLPTVPAQLTVTATAANATDT---DMGRVVPVSVVVTGADGAVIATLEERFAILGRTGS--AELADPARAGGAVSANATDTPRRRRRDVTITAPVDMRPFAVVSGDHNPIH------ALLAGLESPIVH---GMLSAAAQHAVTATDGQARPPARLVGWTARFLG-RPGD-------VDFRVERVGIDQGAEIV----------------------DVAARVGSDLVMSASARLAAPKTVYAFPGQGIQHKGMGMEVRARSKAARKVWD-TADKFTRDTLGFSVLHVVRDNPTSIIASGVHYHHPDGVLYLTQFTQVA-MATVAAAQVAEMREQGAFVEGACGHSVGEYTAQLEALLEMVFHRGSKMHDIVPRDRPSQIDLDDADVPAFVAGIAESTGEFLEIVNFNLRGSQYAIAGTVRGLEA---LEAEVERRRELTGGRRSFILVPGIDVPFHSRVLRVGVAEFRRSLDRVM-PRDADPDLIIGRYIPNLVPRLFTLDRDFIQEIRDLVPAEPLDEILADYDTWLRERPREMARTVFIELL-AWQFASPVRWIETQDLLFEEAAGGLGVERFVEIGVKSSPTVAGLATNTLK-----------LPEYAHSTVEVLNAERDAAVLFATDTDPEPEPEEDEPVAESPAPDVVSEAAPVAPAASSAGPRPDDLVFDAADATLALIALSAKMRIDQIEELDSIESITASSRRNQLLVDLGS--SDLAGLRSQVTKLARTYKPYGPVLSDAINDQLRTVLGPSGKRPGAIAERVKKTWELGEGW 1916
34 -9.8504qsh_A mol:protein length:1148 Pyruvate carboxylase  ali model follow..  11  1.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................HMMNRIKKVLVAN----------RGEIAIRVMRA------TELKIKTVAIYSEDTGSFHRYKSDEA---VGAGKKPIDAYLDIENIIEIAKESGADAIHPG---GFL-------SENIEFARRCEQEGIIFVKHLDMFGDKIKAKEQALLADI----------VIPGSNGPVAGIKEVEEFGEKNGYPL-KASLGGGGRGMSFERASSEAKAAFGNDEVYVEKCVMNPKHIEVQIL------GDTHGNIVHLFERDCSIQRRHQKVVEVAPCNAITSELRNRICDAAVKLMKNVDYINALVEGDDFYFIEVNPRVQVEHTIT-------EMITGIDIVQSQLFI---------------ADGYHDQLVAIPKQEDIHIHGSAIQSRITTEDLNNFMPDTGRVDTSTGGFGVRLDAGNGFQGTVVTPFSLLVKLCTWGMTFEQAT-----RKMRRNLIEFRIRGVKTNIPFLLNVVRHPDASGNYNTSFIDTTPELFKFPHIRDRGTKTLRYIGNVTVNGFPGIKHRDKPVYAEPRLPKIPYGSQISPG-------TKQILDAKGPEGVVDWVKKQTTLRDAHQSLLATRVRSKDIFQIADAMAHLLPEMWGGATFDVAYRFL--------EDPWVRLETLRKQIPNVMFQMLLRGANAVGYKNYPDNVIREFVKQSAQSGVDVFRNWIKGMEVSIDAVREAGKIVEAAICTGDIDDDTRTKYTIDYYKDMAKELVAQGTHILGIKDMAGLLKPQAAYRLIGELKDTVD-------------VPIHLHTHDTSGNGIYTYAAAVSAGVDIVDVASSASQPSMTGLYYGLVNGNRQTNLDAQNSQIINHYWEDV.... 811
35 -9.8205fl8_s mol:protein length:4914 Midasin  ali model follow..  8  324LINELSKYMGCHDSIVKIHLGEQTDAKLLIGTYTSGDKPGTFEWRAGVLATAVKEGRWVLIEDIDKAPTDV---------------SILLSLLEKRELTIPSRGETVKANGFQLISTVRI---NEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTRV---SVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLLV-----ETGTGKTTVVQQLAKMLAKKLTVINVSQQTETGDLLGGYKPVNSKTVA---PIQENFETLFN----ATFSLKKNEKFHKMLHRCFNNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENNSSFVFNFVEGSLVKTIRAGEWLLLD-------------VNLATADTLESISDLLTEPDSRSILLSEKGDAEPIKAHPD-------FRIFACMNPATDVGKRDLPMGIRSRFTEIYVHSPERDITDLLSIIDKYIGKYSVSDEWVGNDIAELYLEAKKLSDNNTIVDGSN-IRTLTRTLLYVTDIIHIYGLRRSLYDGFCMSFLTLLDQ--KKSEAILKPVIEKFTLGRLKNVKSIMSQTPPSPGPDYVQFKHYWMKKGPNTIQEQAHYIITPFVE------------------------KNMMNLVRATSGKRFPVLIQGPTSS------KTSMIKYLADITGHKFVRINNHEHTDLQE-----GTYVTDDTGKLSFKEGVLVEALRKGYWIVLDELNLAPTDVLEALNRLLDDNRELFIPETQEVVHP-------------------HPDFLLFATQNPPGIYGGRKILSRPQDELEIILRERCQIAPSYAKKIVEVYRSIERSASRLFEQKNSFATLRDLFRWALRDAVGYEQLAASGYMLLAERCRTPQEKVTVKKTLEKVMKVKLDMDQYYASLEDKSLEAIGSVTWTKGMRRLSVLVKEPVLLVGTGCGKTTICQLLAQFMGRELITETGDILGAIANDQDVDLKELLQLYSKSDNKNIAEDVQLEIQKLRDSLNVLFLIQAMRTGNFFLLDEISLADD-SVLERLNSVLEPERSLSDSLVTASENFQFFATMNPGGDYGKKELSPALRNRFTEIW-----PSMEDFNDVNMIVSSRLLEDLKDLANPIVK-EWFGKKLGGGNATSGVISLRDIAWVEFINKVFPKIQNKSTALIYLAENENDLKSLRTECIIQLLKLCGDDLELQQIETNEIIVTQDELQVGMFKIPRFPDAQSSSFNLTAPTTASNLVRVVRAMQVHKPILLEGSPGVGKTSLITALANITGNKLTRINLSEQTDLVDLFGADAPGERSGEFLWHDAPFLRAMKKGEW------VLLDEMNLASQSVLEGLNACLDHRGEAYIPELDISFSCHPNFLVFAAQNPQYQGGGRKGLPKSFVDLLLIAKHL 1903
36 -9.5903jcm_A mol:protein length:2413 Pre-mRNA-splicing factor 8  ali model follow..  10  712........................................................................................LNFLRGTIPLLERYIGNLITRQFEGRSNEIVKTTTKQRLDAYYDLELRNSPESIRQKKARTILQHLSEADVPGMPAPIKKIIERYIKSKADA--IKNEQERQRQIQKNGPEITPEEATTIFSVMVEWLESRSFSPIPFPPLTYKNDTKILVL------ALEDLKDVYASKVRLNASEREELALIEEAYDNPHDTL---NRIKKYLLTQRVFKPVDITMMENYQNISPVYSV-KLFPNWIKPSDSEIPPLLVYKWTQGINNLSEIWDVSRGQSAVLL-----ETTLGEMAEKIDFTLLNRLLRLIVDPNIADYITA----------------KNNVVINFKDMSHVNKYGLIRGLKFASFIFQYYGLVIDLLLLGQERATDLAGPANNPNEFMQFKSKEVEKAHPIRLYTRYLDRIYMLFHFEEDEGEELTD-EYLAENPDPNFENSIGYNNRKCWPKDSRMRLIRQDVNLGRAVFWEIQSRVPTSLTSIKWENAFVSVYSKNNPNLLFSMC-----GFEVRILPRQRMEEVVSNDEGVWDLVDERTKQRTAKAYLKVSEEE-IKKFDSRIRGILMASGSTTFTKVAAKWNTSLISLFTYF--------------REAIVATEPLLDILVKGETRIQNRV-------------------------KLGLNSKM----------PTRFPPAVFYTPKELGISASHILIPASDLSWSKQTDTHFRAGMTHEDEKLIPTIFRYITTWENEFLDSQRVWAEYATKRQEAIQQNRRLAFEELEGSW----------------------------DRGIPRISTLFQRDRH--------AYDRGHRIRREFKQYSLERNSPFWWTNSHHDGKLWNLNAYRTDVIQALGGIETILEHTLFKGTGFNSWEGLEKASGFEDSMQFKKLTHAQRTGLSQIPNRRFTLWWSPTINRAGFLVQLDLTGIFLHGKIPTL------KISLIQIFRAHLWQKIH-------SIVFDICQILDGELDVLQIESVTKETVHPRKSYKMNSSAADITMESVHEWEVSKPSLLHETNDSFKGLITNKMWFDVQLRYGDYD-SHDISRYVRAKFLDYTTDNVS--MYPSPTGVMIGIDLAYNMYDAYGNWFNGLKPLIQNS--MRTIMKANPALYVLRERIRKGLQISSVQEPFLNSSNYAELFNNDIKLFVDDTNVYRVTVHKTFEGNVATKAINGCI-NPKTGHLFLKIIHTSV---AGQKRLSQLAKKTAEEVSALVRSLIIVTRKAMLDPLEVHMLDFPNIAIRPTELRLPFSAAMSIDKLSDVVMKATEPQMVLFNIYDDWLDRI........................................................................................................................................................................ 1999
37 -9.4405vyz_A mol:protein length:1145 Pyruvate carboxylase  ali model follow..  11  9..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MKKLLVAN----------RGEIAVRVFRA------NELGLSTVAVYAEDEYSVHRFKADES---IGQGKKPIDAYLDIDDIIRVALESGADAIHPG---GLL-------SENLEFATKVRAAGLVFVHHLDIFGDKIKAKAAADEAKV-----------GIPGTNGAVDIDGALEFAKTYGYPV-KAALGGGGRGMGYARAKSEAIGAFGSGEIYVEKYIENPKHIEVQIL------GDRHGNIIHLHERDCSVQRRNQKVIEIAPAVGLSPDFRNEICEAAVKLCKNVGYVNALVKDDKFYFIEVNPRVQVEHTIT-------ELITGVDIVQAQIL--------------IAQGKDLHREIGLPAQSEIPLLGSAIQCRITTEDQNGFLPDTGKIDTSPGGFGIRLDVGNAYAGYEVTPYSLLVKVCTFANEFSDSV-----RKMDRVLHEFRIRGVKTNIPFLINVIANENTSGQATTTFIDNTPSLFNFPRLRDRGTKTLHYLSMITVNGFPGIENTEKRHFEEPRQPLLNLEKKKTAKNILDEQ-------DAVVDYVKNTKEVLLTDTTLRQSLLATRLRLQDMKGIAQAIDQGLPEMWGGATFDVAYRFL--------ESPWYRLRKLRKLMP-NTMFQMLFRGSNAV-PQMEKSIQAVRDNGKIAEATICYTGDILDPSRPKYNIQYYKDLAKELEATGAPQAAYRLISELKDTVDLPIHLHTHDTSGNGIITYSGATQAGVDIIDMQSIYYALEHGPRHASINVKNAEQIWEDVRKYYAPFEAGITSPQTEAAVGLGHRFDEIKQMYRKVNMMFGDIIKVTPSSKVVGDMALFMIQNDLTE. 895
38 -9.3902vsq_A mol:protein length:1304 SURFACTIN SYNTHETASE SUBUNIT 3  ali model follow..  9  48..............................................................................................NIKCLEESMNVIMDR---------YDVFRTVFIHEKVKRPVQVVLKKRQFHIEEIDLTHLTGSEQTAKINEYKEWVWSYHHIILDGWCFGIVVQDLFKVYNAEQKPYSLPPVKPYKDYIKWLEKQDKQ-LRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRYQQSGDLAFGTVVSGRPAEIKGVEHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYDIQSQADQPKLIDHEESSENGFDMVDVHVFEKSNYDLNLMASPGDEMLIKLAY-NENVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVEREFLLTGLNPPAQAHETKPLTYWFKEAVNANPDAPALTYSGQTL------SYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGV-LKAGAAYLPVDPKLPMLADSAAACLLTHQEMKEQAAELPYTGTTLFIDDQTRFEEQASDPATAIDPNDPAYIMYTSGTTGKPKTTHANIQGLVKHVDYMAFSDQDTFLSVSNYAFDAF-TFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGEDPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISSVYILNEQSQGLCISGMGVSKGYV----NRADLTKEKF--IENPFKPGETLYRTGDLARWLPDGTIEYAGRDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGDASINAYLVNRTQLSAEDVKAHLKKQLPA--YMVPQTFTF--------DELPLTTNGEWIGPRNEMEETIAQIWSEVLGRKQIGIHDDALGGHALKA---MTAAS--------------------RIKKELGIDLPVKLLFEAPTIAGISAYLKNGGSD---LQDVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIEEEDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKHGLKQKTHAFYSYY........................................................................................................................................................................................................................................................................................................................................................................................................ 1199
39 -9.2603bg5_A mol:protein length:1173 Pyruvate carboxylase  ali model follow..  13  21..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IKKLLVAN----------RGEIAIRIFRA------AELDISTVAIYSEDKSSLHRYKADES---VGSDLGPAESYLNIERIIDVAKQANVDAIHPG---GFL-------SENEQFARRCAEEGIKFIEHLDMFGDKVKARTTAIKADL----------VIPGTDGPIKSYELAKEFAEEAGFPL-KATSGGGGKGMEESELEDAFHRAKSEAEKSFGNSEVYIER-EVQVI------GDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENIKYVNALVSGDEFFFIEVNPRVQVEHTIT-------EMVTGIDIVKTQIL--------------VAAGADFGEEINMPQQKDITTLGYAIQCRITTEDLNDFMPDTGTIIASSGGFGVRLDAGDGFQGAEISPYSLLVKLSTHAISFKQAE-----EKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSTKFIEETPELFDIQPSLDRGTKTLEYIGNVTINGFPNVEKRPKPDYELASIPTVS---------SSKIASFSGTKQLLDEVGPKGVAEWVKKQLLTDTTFRDAHQSLLATRVRTKDMINIASKTAD--------------VFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTIC-DILNPERSNIYTLEYYVKLAKELERE--------GFHILAIKDMAGLLKPKAAYELIGELKSAVDLPILHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALN........ 805
40 -9.1303vkh_A mol:protein length:3367 Dynein heavy chain, cytoplasmic  ali model follow..  11  4...................................................................................................................................................................................................................................................................................................................................GGGDYKDDDDKGGGKVPVEEEIQDLKAV-----ELSNTWQEIDSLKETAWSAIIPRKVRKSLEDTLQKLKNRQYSAFDHAQNLIKIYLKGNAIITDLHSEAIKDRHWKILKKRLNTNWIITELTLGSIWDSDLANENIYREVITAAQGEIALEEFLKGVREFWTTLELDL-----------VNYQRKCKLVRGWDDL--FNKLAEHLNSISAMKMSPYYKVFEEEANHWDD----RLNKVRSLLDVW-IDVQRRWVYLEGIFSGSGDINQLLPA--------ESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLL-KALGEYLERQRSAFGDEDLLEIIGNSKDIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQ----------------IVWSTQVD------------QALGGGTLQQSKIQEQL-----------QSIEQTTQMILNNLADSVLQDLSAQKRKKFEH---TELVHQRDVVRQLQKCKNLTGNKDFD--LYHMRYYYDATQ-MANATFYYGFEYLGIGER-QTPLTDRCYLTL-----TQALESRMGGNPFGPA-GTG---TETVKALGSQLGRFVLV--CCDEGFDLQAMSRIFVCQCGAWGCFDE---------FNRLEERI-LSAVSQQIQTIQVALKENSKEVELLGGKNISL--HQDMGIFVTM--------------------------------NPGYA--GRSNLPD-----NLKKLFRSMAMIKPDREMIAQVMLYSQGFKT-------------------AEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSLVSAGGIKRKCPQLPPITDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDI---PLIQSLLLDVFPGSLRKKIQEIAKQRHLV-QLHQILNINHGVMMVGPSGGGKYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESHWIIFDGDVDPE-----------VENLNSLLDDNKLLTLPNGE------------RLALPNNVRVMFEVQDLKYATLATISRCGMVWFS....................................................................................................... 1048
41 -9.1303vkg_A mol:protein length:3245 Dynein heavy chain, cytoplasmic  ali model follow..  11  4...................................................................................................................................................................................................................................................................................................................................GGGDYKDDDDKGGGKVPVEEEIQDLKAV-----ELSNTWQEIDSLKETAWSAIIPRKVRKSLEDTLQKLKNRQYSAFDHAQNLIKIYLKGNAIITDLHSEAIKDRHWKILKKRLNTNWIITELTLGSIWDSDLANENIYREVITAAQGEIALEEFLKGVREFWTTLELDL-----------VNYQRKCKLVRGWDDL--FNKLAEHLNSISAMKMSPYYKVFEEEANHWDD----RLNKVRSLLDVW-IDVQRRWVYLEGIFSGSGDINQLLPA--------ESTRFKSINSEFIAILKKVSGAPLILEVLAIERIQQTMERLSDLL-KALGEYLERQRSAFGDEDLLEIIGNSKDIQKHFRKMFAGLANLTLDDEKTTIIGMSSAEGETVTFKKPISIANGPKIHEWLTMVESEMKSTLATLLSESLQHFNQVDVNDHSKYSEWVDNYPTQLVLLTSQ----------------IVWSTQVD------------QALGGGTLQQSKIQEQL-----------QSIEQTTQMILNNLADSVLQDLSAQKRKKFEH---TELVHQRDVVRQLQKCKNLTGNKDFD--LYHMRYYYDATQ-MANATFYYGFEYLGIGER-QTPLTDRCYLTL-----TQALESRMGGNPFGPA-GTG---TETVKALGSQLGRFVLV--CCDEGFDLQAMSRIFVCQCGAWGCFDE---------FNRLEERI-LSAVSQQIQTIQVALKENSKEVELLGGKNISL--HQDMGIFVTM--------------------------------NPGYA--GRSNLPD-----NLKKLFRSMAMIKPDREMIAQVMLYSQGFKT-------------------AEVLAGKIVPLFKLCQEQLSAQSHYDFGLRALKSLVSAGGIKRKCPQLPPITDAESKTKADQIYCQYEIGVLLNSINDTMIPKLVADDI---PLIQSLLLDVFPGSLRKKIQEIAKQRHLV-QLHQILNINHGVMMVGPSGGGKYLEAIEQVDNIKSEAHVMDPKAITKDQLFGSLDLTTREWTDGLFTATLRRIIDNVRGESHWIIFDGDVDPE-----------VENLNSLLDDNKLLTLPNGE------------RLALPNNVRVMFEVQDLKYATLATISRCGMVWFS....................................................................................................... 1048
42 -9.0702qf7_A mol:protein length:1165 Pyruvate carboxylase protein  ali model follow..  11  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MGGPISKILVAN----------RSEIAIRVFRA------NELGIKTVAIWAEDKLALHRFKADES--GRGPHLARDLGPIESYEVIRVAKLSGADAIHPG---GLL-------SESPEFVDACNKAGIIFIDTMRQLGNKVAARNLAISVGV----------VVPATEPLPDDMAEVAKMAAAIGYPV-KASWGGGGRGMSEADLAKEVTEAKREAMAAFGKDEVYLEK-ESQIL------GDTHGNVVHLFERDCSVQRRNQKVVERAPAPYLSEAQRQELAAYSLKIAGATNYI----GAGTVEYLMDADTIEVNPRIQVEHTVT-EVVTGIDIVKAQIHI---------------LDGAA-PQSGVPNQEDIRLNGHALQCRVTTEDEHNFIPDYGRITASASGFGIRLDGGTSYSGAIITRYPLLVKVTAWAPNPLEAI-----SRMDRALREFRIRGVATNLTFLEAIIGHPKRDNSYTTRFIDTTPELFQQVKRQDRATKLLTYLADVTVNGHPEAKDRPKPLENAARPVVPYANGNGVKDGT--KQLLDTLGPKKFGEWMRNEKRVLLTDTTMRQSLLATRMRTYDIARIAGTYSHALPECWGGATFDVSMRFL--------EDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVKYFVRQAAKGGIDLFR-----VFDCLNWVENMRVSMDAIAEEN-----KLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEAV.... 819
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.