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Query: [GOU] KOG1442 GDP-fucose transporter, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYKNLEEHNRLVNKYLKIFFVVSLYWCTSILTVFVNKHLLSSDTVNLGAPLFMSWFQCVVSTVICFVASRLSRKYPSVFTFPEGNPLDIDTFRKILPLSVLYTLMIGANNLSLSYVTVAFYYIGRSLTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWLGVDQESLTEVFSWRGTIFGVLSSLALAMFSIQTKKSLGYVNQEVWLLSYYNNLYSTLLFLPLIIINGELESIITYPHLWASWFWAAMTLSGLCGFAIGFVTALEIKVTSALTHNISGTAKACAQTVIATQYYHDVRSALWWTSNVVVLVASAAYTRVKQLEMMRQHQQRSTATQKALast
1 -97.1005oge_A mol:protein length:337 GDP-mannose transporter 1  ali model follow..  17  5.KTGHAGHNPWASVANSGPISILSYCGSSILMTVTNKFVVNL--KDFNMNFVMLFVQSLVCTITLIILRILG--------YAKFRSLNKTDAKNWFPISFLLVLMIYTSSKALQYLAVPIYTIFKNLTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSVVATWGDQQAVAAKAAGYFWMFTNCITSALFVLIMRKRIKLTNFKDFDTMFYNNVLALPILLLFSFCVEDWSSVNLTNNF-SNDSLTAMIISGVASVGISYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVAKQKKQQAQPLRK....... 337
2 -96.4005y78_A mol:protein length:329 Putative hexose phosphate translocator  ali model follow..  14  4.QKSSVGVSPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNM----WKYPWVLSTIQLGVGALYCTFLWVLG--------LRTKPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVAISFTHVVKSAEPVFGAVGSALVLGEFFHPLTYLTLVPIVSGVALSAATELTFTWTGFITAMISNVAFVTRNITSFTMVDFKNEKTLIAQNTYALITIISFFMELPFALLMEGFPPLVSIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNVSPVSFSIGNTIKRVIIIFGSILVFRTPVTRLNFIGSTIAIIGTMLYSLAKAKLPSKREKQGTENLY.. 327
3 -30.8005i20_A mol:protein length:298 Uncharacterized protein  ali model follow..  9  2.........SRSSATLIGFTAILLWSTLALATSSTGAV-----------PFLLTALTFTIGGAVGIAAGLARG---------VGLSVLRQPWPVWVHGIGGLFGYHFFYFSALKLAPPAEAGLVAYLWPLLIVLFSAFLPGERLRPAHVAGALMGLAGTVVLLGARAGGFGFAPPGYLAAAACAVIWSVYSVASRRFAR--VPTEVVAGFCLATAALSALCHILF---------EPSVWPVGSEWLAVVALGIGPVGIAFYTWIGMKRGDVRLLGVLSYAAPVLSTLLLVVAGFAAPSGALAIACALIVGGAAVATLLARRLESSGENLYFQ..... 298
4 -13.8002i68_A mol:protein length:137 Protein emrE  ali model follow..  3  5..........................................................................................................................................................................................................................IYLGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPHEFEAYVEQKLISE 123
5 -6.9305ctg_A mol:protein length:224 Bidirectional sugar transporter SWEET2b  ali model follow..  10  15.................................................................................................AGNIFALALFLSPVT------TFKRILKAKSTERFDGLPYLFS-------LLNCLICLWYGLPWVADGRLLVATVNGIGAVFQLA------YICLFIFYADSRKTRMKIIGLLVLVVCGFALVSHASVFFFDQPLRQQ--------------FVGAVSMASLISMFAVIRSESPFYLSLSTFLMSASFALYGLLLRDFFIYFPNGLGLILGAMQLALYAYYSSNSLEVLFQ......... 224
6 -6.6205oql_B mol:protein length:907 Utp2  ali model follow..  9  492VKGIEVTKLPTVVQRIRAL---------HPKLDAKNKERLGN------SQVLIHHIAYLGDRFQPHWFPTLEQLSRHVHSLAKTFPIEVAKAYRMRIQEMEEHRPLAPTVGDLVILTAPTSDHFHQVCTPAMLAIARYLGQKVPAALSDFAVGIYLSILALQYQDFAKRYVPEMMNFLLNTLCALAPERAKSKLGNFPVHEPPAGIRIKDATNTPIRQLNCGDCLRKDELSPAETSSLQIAILSTATAILKSAADTWHKLPAFIESHLPSSLTSKLNDLASHLSRLLQLSRLSRRPLELHHHRPLAIKTYIPKFFDPDKHYDPNRERAELAKLKAE. 840
7 -6.4504x5m_A mol:protein length:100 Uncharacterized protein  ali model follow..  9  1.......................................................................................................................................................................................................................................................MDTILLTGLFAAFFTTFATRNTEGISVVIMFLTGVISWIAYGIMRSDFAVLIANIVTLFLAAPVLVITLINRRKKHVLESSGENLYFQ.. 100
8 -6.2904he8_J mol:protein length:176 NADH-quinone oxidoreductase subunit 10  ali model follow..  9  11........................................................................................................................................................LLLLSGVLVVTLRNAIHAALALILNFLVLAGVYV----------ALDARFLGFIQVIVYAGAIVVLFLFVIMLLFAA----QGEIGFDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQDLKGGLPQAL-----GPLLYGDWLFVLLAVGFLLATVVAVALVEPGKASRAKEAEKREEV.... 174
9 -6.2404qnc_A mol:protein length:93 chemical transport protein  ali model follow..  12  1.........................................................................................................................................................................................................................................................MENLIGYVAAFLTTVSTKQTRDISRNIMFFLGVVLWFVYGILRSDLPIILANVVTLFFVTIILYYKLTEGNQTGSLEVLFQ....... 93
10 -6.2105xpd_A mol:protein length:293 sugar transporter  ali model follow..  7  1................................................................................................................MALTNNLWAFVFGILGNIISFVLFLICKKKSTEGFQSLPYVSALFNAMLWIYYAMQKDGTAFLLITINAFGCVIETIYIVLFVSYANKKTRISTLKVLGLLNFLGFAAIVLVCELLTKGSTREKVLGGICVGFSVSMFAAPLSIMRVVVRTRSVEFM-PFSLSLFLTINAVTWLFYGLAIKDFYVALPNVLGAFLGAVQMILYIIFKYYKTPVAQMKK....... 225
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.