current user: public
If you have questions about the server, please let us know.

Query: [MU] KOG2516 Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family), from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550
# Score Template Links and tools%idFirst MRWSVLDTVLLTVISFHLIQAPFTKVEESFNIQAIHDILTYSVFDISQYDHLKFPGVVPRTFVGAVIIAMLSRPYLYLSSLIQTSRPTSIDVQLVVRGIVGLTNGLSFIYLKNCLQDMFDEITEKKKEENEDKDIYIYDSAGTWFLLFLIGSFHLMFYSTRTLPNFVMTLPLTNVALGWVLLGRYNAAIFLSALVAIVFRLEVSALSAGIALFSVIFKKISLFDAIKFGIFGLGLGSAISITVDSYFWQEWCLPEVDGFLFNVVAGYASKWGVEPVTAYFTHYLRMMFMPPTVLLLNYFGYKLAPAKLKIVSLASLFHIIVLSFQPHKEWRFIIYAVPSIMLLGATGAAHLWENMKVKKITNVLCLAILPLSIMTSFFISMAFLYISRMNYPGGEALTSFNDMIVEKNITNATVHISIPPCMTGVTLFGELNYGVYGINYDKTENTTLLQEMWPSFDFLITHEPTASQLPFENKTTNHWELVNTTKMFTGFDPTYIKNFVFQERVNVLSLLKQIIFDKTPTVFLKELTANSIVKSDVFFTYKRIKQDEKTDLast
1 -18.5005ezm_A mol:protein length:578 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferases of PMT family  ali model follow..  12  36....LFVAVALVVWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTIRYNYFEKP-------------------------------PFHMWVTVVGYELFGLGEWQA--RLAVALSGLLGIGVSMMA-----ARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMRRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVV-VMLVITVPWFYLVSVRNPEFPNFFFHWQRYTSNIHSRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRAFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVA............................................................................................................................................................................. 394
2 -13.1006c26_A mol:protein length:718 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3  ali model follow..  7  12FQTILKLVIFVAIFGAAISSSIIHEFDPWFNYRATKYLVNNSFYKFLNFDDRTYPLGRVTGGTLYPGLMTTSAFIWHALRNWLGLPIDIRNVCVLFAPLFSGVTAWATYEFTKEIKDASAGLLAAGFIAIVISRSVAGEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMG-TTWYAIGTVASMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKAKIHIPIIASVSEHQPVSWPAFFFD-----THFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAG--VMVRLMLTLTPVICVSAAVALSKIFDIYLDFKTSDRKYAIKPAALLAKLIVSGSFIFYL---------YLFVFHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWW-DYGYQIGGMADR..................................................................................... 529
3 -11.8006ftg_5 mol:protein length:705 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A  ali model follow..  7  18....LKLLILSMAAVLSFSTSVIHEFDPYFNYRTTRFLAEEGFYKFHNFDDRAWYPLGRIIGGTLYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVISRSVAGEGIAIFCMLLTYYMWIKAVKTGSIYWAAKCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTG-CTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLLLDPSYAKNNIPIIASVSEHQPTTWSSYYFD-----LQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSA--VMVRLMLVLAPVMCILSGIGVSQVLKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYY--------------WLRHNTPEDAKVMSWW-DYGYQITAMANR..................................................................................... 538
4 -11.6003rce_A mol:protein length:724 Oligosaccharide transferase to N-glycosylate proteins  ali model follow..  13  14.......KYTCILILIAFAFSVLCRLYWVAWASEFYEFFFNDQLMITTNDGYAFAEGARDMIAGSTLTYWLYSILPFSFESIILYMSTFFASLIVVPIILALLGSIANSYYNRTMTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPIFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHRKEKIFYLAIALMIIALSMLAWQYKLALIVLLFAIFAFKEEKINFYMIWALIFISISILHLSGGLDPVLYQLK-KDAAFMYFNVNETIMEVNTID------PEVFMQRISSSVLVFILSFIGFILLCKDHKSMLLALPMLALGFMALRAGLRFTIYAVPVMALGFGYFLYAFFNFLEKKQIKLSLRNKNILLILIAFFSISPALMHIYYYKSSTSYEASILNDLK-NKAQREDYV......................................................................................................................................... 460
5 -11.1005ogl_A mol:protein length:713 Undecaprenyl-diphosphooligosaccharide--protein glycotransferase  ali model follow..  12  14.......KYTAILILIAFAFSVLARLYWVAWASEFYEFFFNDQLMITTNDGYAFAEGARDMIAGSTLTYWLYSILPFSFESIILYMSTFFASLIVVPIILALLGSIANSYYNRTMTDMLVLVLPMLILLTFIRLTINKDIFTLLLSPVFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHRKEKIFYLTIALMIIALSMLAWQYKLALIVLLFAIFAFKEEKINFYMIWALIFISILILHLSGGLDPVLYQLK-KDAAFMYFNVNETIMEVNTID------PEVFMQRISSSVLVFILSFIGFILLLKDHKSMLLALPMLALGFMALRAGLRFTIYAVPVMALGFGYFLYAFFNFLEKKQIKLSLRNKNILLILIAFFSISPALMHIYYYKSSTSYEASILNDLK-NKAQREDYV......................................................................................................................................... 460
6 -9.9803waj_A mol:protein length:875 Transmembrane oligosaccharyl transferase  ali model follow..  11  8FKKYWHLSVLVIAALISVKL--LGGNDPWYYYRLIENTIHNFPHRIW-FDPFTYPYGSYTHFGPFLVYLGSIAGII----FSATSGESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGQFLQRSILGIWEAFWQVSALGTFLLAYNRWKGHIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVG-LFFVISPDFARNLLSVVRVVQPKGGALTIAEVYPFFFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIALW--GQNRFAYYFAAVSAVYSALALSVVFDKLHLYR................................................................................................................................................................................................ 454
7 -7.1205oql_B mol:protein length:907 Utp2  ali model follow..  10  503..............................................................................................VVQRIRALHHPKLDAKNKERLGNFSQVLIHHIAYLGDRFQPHWFPTLEQLSRHVHSLAKTFPIEVAKAYRMRIQEMEEHRP------LAPTVGDLVILTAIGTTFFHQVCTPAMLAIARYLGQKVPAALSDFAVGI------YLSILALQYQDFAKRYVPEMMNFLLNTLCALAPERAKSKLGNF-TNTPIRQLNCGDCLRKDELSPAETSSLQIAILSTATAILKSAADTWHKLPAFIESFQPALSV-----AQHLLTKPNASHLPSSLTSKLNDLASHLSRLLQLSRLSRRPLELHHHRPLAIKTYIPKFEDDFDPDKHYDPNRERAELAKLKA-----------KRERKGALRELRKDAQFIRREQLRIKKEKDEAYEKKFKRIIAEIQNEEG-RAANEYAREKAARKRKR........................................... 907
8 -6.5402onk_C mol:protein length:284 Molybdate/tungstate ABC transporter, permease protein  ali model follow..  10  47...........................................................................................................................................NFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSV----IYINQAKEGFASVLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVF........................................................................................................................................................................................................... 257
9 -6.0504yk5_A mol:protein length:154 Prostaglandin E synthase  ali model follow..  9  76.....................................................................................................................................................................................................................................................................NDMET-----------------IYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCAS............................................................................................................................................................................................................... 141
10 -5.9505d92_D mol:protein length:342 AF2299 protein,Phosphatidylinositol synthase  ali model follow..  12  144...............................................................................................................................................................ARGLFAAIFLPIARLLADWGVSPDAVTVVGTLGVMAGALI-------------------------YPMGQLFWGTVVITVFVFSDII--GLMA-----------LLFREGPWGA-----FLDSYLDRVGDSSVFTIVIWFFLGGANPTIAILALICLVLSSLVSYS-ERSERLVVVLVATGLVGLGIPSWVL--------------LVVLIVLAIASVVTIFQRVLTVREQAKAWTA........................................................................................................................................................... 342
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.