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Query: [GE] KOG2575 Glucosyltransferase - Alg6p, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKKKPAKHSGEDDITIPVSPQTGSSIDTWWWLTHKGTTTSFLCISLFALLIRSAVTMYPYSGAGIPPKFGDFEAQRHWMEITTNLPVIDWYRNGTYNDLTYWGLDYPPLTAYQSYIHGIFLRFFNPESVALLSSRGHESYLGKLLMRWTVLSSDAFIFFPAALFFVLVYHRNRTRGGKSEVAWHIAMILLNPCLILIDHGHFQYNCISLGLTVGAIAAVLCESEVLTCVLFSLALSHKQMSAYFAPAFFSHLLGKCLRRKSPILSVIKLGIAVIVTFVIFWWPYVHSLDDFLMVLSRLAPFERGIYEDYVANFWCTTSILIKWKNLFTTQSLKSISLAATILASLPSMVQQILSPSNEGFLYGLLNSSMAFYLFSFQVHEKSILMPFLSATLLALKLPDHFSHLTYYALFSMFPLLCRDKLLIPYLTLSFLFTVIYHSPGNHHAIQKTDVSFFSFKNFPGYVFLLRTHFFISVVLHVLYLTIKPPQKYPFLFEALIMILCFSYFIMFAFYTNYTQWTLSSHFGSSDKEKKQILast
1 -9.3401e17_A mol:protein length:150 AFX  ali model follow..  11  11.GSHMLEDPGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDK-----GDSNSSAGWKSIRHNLSLHSKFIKVHNEA-SWWMLN-PEGGKSGKAPRRRAASMDSSSKLLRGRSKA............................................................................................................................................................................................................................................................................................................................................................................................................ 144
2 -8.7503waj_A mol:protein length:875 Transmembrane oligosaccharyl transferase  ali model follow..  10  17.........................................LVIAALISVKLRILNPWNSVFTWTVRLGGNDWYYYRLIENTIHNFPHRIWFDPFTY---------YPPFLVYLGSIAGIIFSATSGESLR--------------VLAFIPAIGGVLAILPVYLLTREVFDKRAA-------VIAAFLIAIVPGQFLNDHHIWEWQVSALGTFLLAYNRWKGHDLVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVISPDFARNLLSVVRVVQ------PKGGALTIAEVYPFFFTHNGEFTLTNAVLHFGA-----------LFFFGMAGILYSAYRFLKRRSFPE---------------------MALLIWAIAMFIALWGQNRFAYYFAAVSAVYSALALSVVFDKLHLYRALENAIGARNKLSYFR. 470
3 -8.7304lg0_A mol:protein length:133 Forkhead box protein O1  ali model follow..  15  1..GPGYPGPLAGQPRKSSSSRRNAWGNLSYADLITKAIESSAEKRLTLSQIYEWMVKSVPYFKDK-----GDSNSSAGWKSIRHNLSLHSKFIRVQNEG-SWWMLN-PEGGKSGKSPRRRAASMDNNSKFAKSRSR............................................................................................................................................................................................................................................................................................................................................................................................................. 132
4 -8.6304mkq_A mol:protein length:169 MONALYSIN  ali model follow..  16  1.............................................................SGRQYPTKKGDFAIDGYLLDYSSPKQ---WVDGITVYG-QNWGTYTRPVFAYLQYVISGSGTFVIYQVVLVYAHNATSANAFAYSKTQAVGSRVDLYYLSAITQRKRVIVPSSNAVTPLDWDTVQRNVLMENYNPGSNSGHFSFDWSAYN.................................................................................................................................................................................................................................................................................................................................. 163
5 -8.5402l5y_A mol:protein length:150 Stromal interaction molecule 2  ali model follow..  9  1..........GSHMASTEEDRFSLEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHSHLHREDKHITIEDLWKRWKTSEVHNW----TLEDTLQWLIEFVELPQYEKNFRDTLPRIAVHEPSFMISQLKISDRSHR--QKLQLKALDVVLF...................................................................................................................................................................................................................................................................................................................................................................................... 149
6 -8.3302k60_A mol:protein length:150 PROTEIN (Stromal interaction molecule 1)  ali model follow..  9  1..........GSHMASSEDEKLSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVKHSTFHGEDKLISVEDLWKAWKSSEVYNW----TVDEVVQWLITYVELPQYEETFRKAMPRLAVTNTTMTGTVLKMTDRSHR--QKLQLKALDTVLF...................................................................................................................................................................................................................................................................................................................................................................................... 149
7 -7.9306du8_A mol:protein length:805 Polycystic kidney disease 2-like 1 protein  ali model follow..  9  60.TAYRTQVSSCCLHICQGIRGLWGTTLTENTAENRELYIKTTLRELLVYIVFLVDICLLTYGMTSSSAYYYTKVMSEDFAQLLDSLYWTKWYYSPDKEEQLPFGPFNGTAWTYHS-HWGRLTSYSGGGYYLDLPGSRQGSAEALRALQTRVVFIDFSVYNANINLFCVLR-------------------------LVVE---FPATGGAIPSWQIRTVKLIRYVSNWDFFIVGCEVIFCVFIFYYVVEEILELHIHRLRYLSSIWNILDLVVILLSIVAVGF--HIFRTLEVNRLMGKLLQQPNTYADFEFLAFWNMNAVNLFFAWIKIFKYISFNKTMTQLSSTLARCAKDILGFAVMFFIVFFAYAQLGYLLFGTQVENFSTFIKCIFTQFRIILGDFDYNAIDNANRI-LGPAYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQK................................................................................. 575
8 -7.6801jnp_A mol:protein length:116 T-CELL LEUKEMIA/LYMPHOMA PROTEIN 1A  ali model follow..  19  22.................................................................EKHVYLD-EFRRSWLPVVIKLPLM-WQLYPRSADSMYWQIYHIKFRDVEDMLLELIDSESNDE..................................................................................................................................................................................................................................................................................................................................................................................................................... 116
9 -7.6502lgz_A mol:protein length:273 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3  ali model follow..  13  1.........................................MGSSSSGLVPRGSHSTWVTRTAYSSPSVVLPSQTPDDFREAY------YWLRMNSDEDAAWW--DY----GYQIGGMADRTTLVDNNVGKANASPEEKSYEILKEHDVDYVLVIFGGL...................................................................................................................................................................................................................................................................................................................................................................................... 125
10 -7.6406c26_A mol:protein length:718 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3  ali model follow..  10  14........................................TILKLVIFVAIFGAAISSRLFAVIKFESIIHEFDPWFNYRATKYLVKFLNWF------DDRTW---YPTLYPGLMTTSAFIWHALRNWLGLPIDIRNVCVLFAPLFSGVTAWATYEF---------------TKEIKDASAGLLAAGFIAIVPGYIS---GSYDNEAIAITLLMVTFMFWIKAHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQ-AALGVFGLIQIVAFGDFVKGQISTAKFKVIMMVSLFLILVLGVVGLSALTYMGLIAPWTGRFYSLWDTNYAKIHIPIIASVSEHQPVSWPAFFFDTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCSYFAGVMVRLMLTLTPVICVSAAVALSKI............................................................................................ 424
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.