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Query: [G] KOG2762 Mannosyltransferase, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEGEQSPQGEKSLQRKQFVRPPLDLWQDLKDGVRYVIFDCRANLIVMPLLILFESMLCKIIIKKVAYTEIDYKAYMEQIEMIQLDGMLDYSQVSGGTGPLVYPAGHVLIYKMMYWLTEGMDHVERGQVFFRYLYLLTLALQMACYYLLHLPPWCVVLACLSKRLHSIYVLRLFNDCFTTLFMVVTVLGAIVASRCHQRPKLKKSLALVISATYSMAVSIKMNALLYFPAMMISLFILNDANVILTLLDLVAMIAWQVAVAVPFLRSFPQQYLHCAFNFGRKFMYQWSINWQMMDEEAFNDKRFHLALLISHLIALTTLFVTRYPRILPDLWSSLCHPLRKNAVLNANPAKTIPFVLIASNFIGVLFSRSLHYQFLSWYHWTLPILIFWSGMPFFVGPIWYVLHEWCWNSYPPNSQASTLLLALNTVLLLLLALTQLSGSVALAKSHLRTTSSMEKKLNLast
1 -10.9005ezm_A mol:protein length:578 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferases of PMT family  ali model follow..  11  36................................................LFVAVALVVWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTIRYNAEKPPFHM-----WVTVVGYEL---GLGEWQARLAVALSGLLGIGVSMMAARRWARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRHLALGVVVMLVITVPWFYLVSVRN-----EFPNFFFIHEHWQ-RYTSNIHSRSGSVFYFLP------LVIGGFLPWAGIFPKLWTAMRAPVEGTQARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGI............................................................................ 358
2 -7.1406ftg_5 mol:protein length:705 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A  ali model follow..  11  1.............................MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFAVLEFDPYFNYRTTRFLAEEGFYKFHNWFDDR--AWYPLGLMITSAAIYHVLHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVNEGIAIFCMLLTYYMWIKAVKTGSIYWAAKCALAYFYMVSSWGGYVFLINLIPL--HVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSM---YFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQD 447
3 -6.8805z10_A mol:protein length:2547 Piezo-type mechanosensitive ion channel component 1  ali model follow..  9  855............................................VWTCIIIVCKMLYQLKIVNPHEYTNLQPLEINQSLLYRGPVDPANWFGVRKGYPNLGYIQNHLQILLLLHYRRQHQQAPLPAQAVCDLLSCLKYFINFFFYKFGLEICFLMAVNVIGQRM----------NFMVILHGCWLVAILTRRR-----REAIARLWPNYCLFLTLFLLYQYLLCLGMPP--------------------------ALCIDYPWRWSKAIPMNSAL------------IKWLYLPD--FFRAPNSTNLISDFLLLLCASQQWQVFSAERTEEWQRMAGINTDHLEPLRGEPNPIPNFIHCSYLDML--KVAVFRYLFWLVLVVVFVAGATRISIFGLGYLLACFYLLLTLLQKDTRAQLCLILYNVTVII............................. 1222
4 -6.8606c26_A mol:protein length:718 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3  ali model follow..  12  15.............................................ILKLVIFVAIFGAAISSRLFAVIEFDPWFNYRATKYLVNNSFYKFLNWFDDR--TWYPLG-AFIWHALRNWLGLPIDIRNVCVLFAPLFSGVTAWATYEFTKEIKDASAGLLAAGFIAIVPGYISRSVNEAIAITLLMVTFMFWIKAQKTGSIMHATCAALFYFYMVSAWGGYVFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQ....................................................................................................................................................................................................... 252
5 -6.4403waj_A mol:protein length:875 Transmembrane oligosaccharyl transferase  ali model follow..  11  14................................................LSVLVIAALISVKLRILNPGGNDPWYYYRLIENTIHNFPH-FDPFTY------YPYGLVYLGSIAGIIFSATSGESLRAVIGGVLAILPVYLLTREVFDKRAAVIAAFLIAI---VPGQFLQRSIHHIWEAFWQVSALGTFLLA-YNRWKGHDLSHNLTARQMAYPVIAGITIGLYIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVISPDFARNLLSVVRVVQPKGGALTIAEVYPFFFTHNGEFTLTNAVLHFGALFFFGMA-GILYSAYRFLKRRSFPEMALLIWAIAMFIALWGQNRFAYYFAAVSAVYSALALSVVFDKLHLYRALENAIGARNKLSY 468
6 -6.0702d8t_A mol:protein length:71 RING finger protein 146  ali model follow..  13  22............................................................................................LQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPEDFLDSG................................................................................................................................................................................................................................................................................................................................ 67
7 -5.8603u0i_A mol:protein length:148 probable FAD-binding, putative uncharacterized protein  ali model follow..  7  13............................................................................YDIREMIQHKHVGRLGYVVDDRPIIVPMTFRFSGGSFYSFTTDGQKTNAMRKNDAICILFDQIESQTKWRTVLVQGRYREIAREDEEEAIVRIM................................................................................................................................................................................................................................................................................................ 106
8 -5.6702yuo_A mol:protein length:78 RUN and TBC1 domain containing 3  ali model follow..  19  23...............................................................ELGFRKNDIITIISQKDEHCWVGE-----LNGLRG--WFPAKFVEVLD........................................................................................................................................................................................................................................................................................................................................................... 63
9 -5.6301x69_A mol:protein length:79 cortactin isoform a  ali model follow..  21  33...............................................................EISFDPDDIITNIEMIDDGWWRGV-----CKGRYG--LFPANYVELRQ........................................................................................................................................................................................................................................................................................................................................................... 73
10 -5.5402ecz_A mol:protein length:70 Sorbin and SH3 domain-containing protein 1  ali model follow..  11  23...............................................................EMSFRKGERITLLRQVDENWYEGRIPGTSRQG-----IFPITYVDVIS........................................................................................................................................................................................................................................................................................................................................................... 65
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.