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Query: [I] KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFDKTRLPYVALDVLCVLLASMPMAVLKLGQIYPFQRGFFCKDNSINYPYHDSTVTSTVLILVGVGLPISSIILGETLSVYCNLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDVCDPDWSKINCSDGYIEYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVALYLQARMKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAILVAVYVSDFFKERTSFKERKEEDSHTTLHETPTTGNHYPSNHQPLast
1 -34.0005jki_A mol:protein length:222 Putative lipid phosphate phosphatase YodM  ali model follow..  19  1MSSGRENLYFQGHMYKPVSLFLFFLILAAAIHTNAVQSA---DEAISVLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGM------------FFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDF--------------------------APLVHESSFSFPSGHSMNAACVYPVIAYFLVKHLPFLSK--HKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFD...................................... 207
2 -33.5004px7_A mol:protein length:262 Phosphatidylglycerophosphatase  ali model follow..  11  2...RSIARRTAVGAALLLVMPVAVWISGWRW------------QPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIK----------AAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRR--------RTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQESLE............ 256
3 -33.2005jwy_A mol:protein length:259 Phosphatidylglycerophosphatase B  ali model follow..  12  1.......MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWC-----------------LRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRR--------RTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQESLEHH.......... 258
4 -23.1001d2t_A mol:protein length:231 ACID PHOSPHATASE  ali model follow..  24  106...............................................................................................................AGDLATRSAKDHYMRIRPF----------------AFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQN-------------EILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHT........................................ 210
5 -22.9002ipb_A mol:protein length:230 Class A nonspecific acid phosphatase PhoN  ali model follow..  26  90...........................................................................................................LLKMGGYYATASAKKYYMRTRPFVLF----------------NHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPERAQ-------------ELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT........................................ 198
6 -22.6002a96_A mol:protein length:250 class A nonspecific acid phosphatase PhoN  ali model follow..  26  110...........................................................................................................LLKVGGYYATASAKKYYMRTRPFVLF----------------NHSTCRPEDENTLRKDGSYPSGHTAYSTLLALVLSQARPERAQ-------------ELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT........................................ 218
7 -13.7001idq_A mol:protein length:609 VANADIUM CHLOROPEROXIDASE  ali model follow..  12  325............................................................................................EVNNADFARLFALVDVACTDAGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGR-GIVRTRIVRHFDSAW---LMFENAISRIFLGVHWRFDAAAARDILIPTTTKDVYAVDNNGATVFQNVEDIRYTTRGTREDEEGLF......... 548
8 -13.7003w35_A mol:protein length:531 NapH1  ali model follow..  10  351...............................................................................................VHGWCHWMLAHVLATFEPLIAAWHHKTRFDAVRPTAIRHVYGNRKIRAWGGVGMGTVDIRASSYLPVGDHPEYPSGSTSLCSATSQAARRYFSTVVEPGITPGKDLSIHIPTWTDFT-CATSRVWGGVHFQTTVDRTIDFGEQFGDLAHEFVQRHVKGD............................... 528
9 -13.6004cit_A mol:protein length:458 VANADIUM-DEPENDENT HALOPEROXIDASE  ali model follow..  13  301...............................................................................................FAKTLFAYTKASVAMADAFISCWDEKYRSNLIRP---------------ETVINQHIDDSWKPVLQTPPFPEYTSGHSVVSGAASVVLTEVFGDNFEVPYGLPIRSFKSFK---AADEAAISRMYGGIHYRAAIEVGVKQGRDLGTFVVNKLHMLSDKKVAQN........................... 452
10 -12.9005lpc_A mol:protein length:666 Vanadium-dependent bromoperoxidase  ali model follow..  12  480....................................................................................................KPVAALVEALENVGLLSKVVAHNQLQNQNYFLPMAFPEGS----------------------PMHPSYGAGHATVAGACVTMLKAFFSSLQQVLLDCPLTVEGEL----IAANISIGRDWAGVHYFTDYIESLRLGEKIAIGILEEQKLTYGEN............................... 646
11 -12.8001qi9_A mol:protein length:556 PROTEIN (VANADIUM BROMOPEROXIDASE)  ali model follow..  15  401................................................................................................................................PQAIQEGSP--------------------------THPSYPSGHATQNGAFATVLKALIGLDLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEE............................... 516
12 -12.4001up8_A mol:protein length:598 VANADIUM-DEPENDENT BROMOPEROXIDASE 1  ali model follow..  14  434............................................................................................DLAVEELGDILEKAEISNRKQNIADGDPDPDPSFLLPMAFAEGSP--------------------------FHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDK-VAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGEN............................... 583
13 -12.1002nr9_A mol:protein length:196 Protein glpG homolog  ali model follow..  12  59..................................................................................................VHLSNLHILFNLSWFFIFGGMIERTFGSVK--LLML-------------YVVASAITGYVQNYVSGPAFFGLSGVVYAVLGYVFIRDKLNHHLFDLPEGFFTMLLVGIALGFISPLFGVEMGNAAH-----ISGLIVGLIWGFID.......................................... 183
14 -11.9001qhb_A mol:protein length:596 HALOPEROXIDASE  ali model follow..  22  480......................................................................................................................................................................SYGSGHAVVAGACVTILKAFFDANFQIDQVFE-PLTVAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTYGEN............................... 581
15 -11.6004njn_A mol:protein length:211 Rhomboid protease GlpG  ali model follow..  11  1...............................MGSSSSGLVPRGSHMAALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWR-MHFSLMHILFNLLWWWYLGGAVEKRLGSGK--LIVI------------TLISALLSGYVQQKFSGPWFGGLSG-VVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAH-----IAGLAVGLAMAFVD.......................................... 197
16 -11.3004qnz_A mol:protein length:200 Rhomboid protease GlpG  ali model follow..  12  58..................................................................................................MHISLMHILFNLLWWWYLGGAVEKRLGSGK--LIVI------------TLISALLSGYVQQKFSGPWFGGLSG-VVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAH-----IAGLAVGLAMAFVD.......................................... 182
17 -9.5405aa6_A mol:protein length:597 VANADIUM-DEPENDENT BROMOPEROXIDASE 2  ali model follow..  19  426......................................................................................................................................................................AYPSGHAINLGAYLTVLKAFLGFEINEDGEEEVGLTYEGELNKVTSNVAIGRSHLGVHWRMDGVFGAEMGEAGAIRRLQQELGGLPEA............................... 546
18 -9.2404csk_A mol:protein length:292 AQUAPORIN-1  ali model follow..  9  31............................................................VVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKV-----SLAFGLSIATLAQSVGHISGAHLNPYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTNFSNHW--FWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTSGQVEEYDLDADDINSRVEMKP 285
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.