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Query: [U] KOG3225 Mitochondrial import inner membrane translocase, subunit TIM22, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MVYTGFGLEQISPAQKKPYNELTPEEQGERGAEMIMNFMTSCPGKSVVSGVTGFALGGVLGLFMASMAYDTPLHTPTPANTAATATAGNIGVGGISRTVQQISDLPFRQQMKLQFTDMGKKSYSSAKNFGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAGPQAALMGGAGFAAFSAAIDLYMKSEDGRPPQNDFKELast
1 -39.8005gup_V mol:protein length:141 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11  ali model follow..  16  16.......................................TECHRKAYASTSIGGATGLIVSAYSIALKP------------------------------------------PASFLEGVARTGRYTFTSAAIGAIFGLTSCISAQVREKDDPLNYFIGGCAGGLTLGARTRYGIGAAACAYMGLTAALVKMGQLEGWQVFAEPKV.. 141
2 -39.4006gcs_J mol:protein length:198 NUJM SUBUNIT  ali model follow..  14  1.....................MSEHVHLPSPTFNTSSAGHFHPYNTLGLATQSAMVGLGAGVVAAAAR-------------------------------------NSLATGPRNILTTFSKSGGVVTIFTGASIAYVFTYCSAANLRERKDGWNHMWAGAATGAVLGARTKVPAFIGWTVLCGAACGLFGWTGARFNADRKASLEQS 150
3 -38.8006g2j_Y mol:protein length:143 MCG5603  ali model follow..  17  18.......................................TQCHRKTYITTALGGICGIIGSAYSVSLNP------------------------------------------ADSTLEAVARVGRYTFTAAAIGAMFGLTTCVSAQVREKDDPLNYFIGGCAGGLTLGATHSYGTAAMGCVYMGTAAALFKIGKLEGWELFPTPKV.. 143
4 -38.2005ldw_Y mol:protein length:141 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11  ali model follow..  16  16.......................................TECHRKTYATTSIGGAAGLVVSAYSVAL------------------------------------------KTPTSFLEGVARTGRYTFTAAAIGAIFGLTSCISAQVREKDDPLNYLIGGCAGGLILGARTRYGIGAAACAYMGLTAALVKMGQLEGWQVFAEPKV.. 141
5 -37.7005xtc_V mol:protein length:140 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11  ali model follow..  12  15.......................................TDCHRKAYSTTSIASVAGLTAAAYRVTLNP------------------------------------------PGTFLEGVAKVGQYTFTAAAVGAVFGLTTCISAHVREKDDPLNYFLGGCAGGLTLGARTHYGIGAAACVYFGIAASLVKMGRLEGWEVFAKPKV.. 140
6 -8.0305sv0_B mol:protein length:244 Biopolymer transport protein ExbB  ali model follow..  15  131....................................................................................................................GYLATIGAISPFVGLFGTVWGIMN-SFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQ..... 215
7 -7.4503n6z_A mol:protein length:363 putative immunoglobulin A1 protease  ali model follow..  13  114..........................................CSAGDYPSFFGVLCGDCRNVGFVNAS-------------VSSARQGIGIITGYLGLKDKGNGNKTGRIVNCYTTGEVIGSGAAGGIAGVLANSYDGQESYIKNCYSNATVSDRAASGGKAGGIAGRKVGVGGFIENCYAYGAVSATKGGVGG............. 252
8 -7.0004c9g_A mol:protein length:318 ADP, ATP CARRIER PROTEIN 2  ali model follow..  10  128..................................................AGNLASGGAAGALSLLFVYSLDYARTRLAADSKSSKKGGA------GLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLKPLLLTGSLEGSFLASFLLGWVVTGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFGKKFK..... 318
9 -6.7604c9j_A mol:protein length:322 ADP, ATP CARRIER PROTEIN 3  ali model follow..  117............................................GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKSSKKGGA------GLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPLVLTGSLDGSFLASFLLGWVVTGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFGKKFK..... 313
10 -6.6004c2i_A mol:protein length:495 ENVELOPE PROTEIN  ali model follow..  292LTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQIKYEGTDAPCKIPFSTQDEKGVTQNGRLITANPIVTDKEKPVNIEAEPPFGESYIVIGAGEKALKLSWFKKGSSIGKMFEATARGARRMAGDTAWDFGSIGGVFTSVGKLVHQIFG--TAYGVLFSGIGIGVLLGLNSRSTSLSMTCIAVGLVTLYLG................. 490

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11.