current user: public

If you have questions about the server, please let us know.

Query: [O] KOG3359 Dolichyl-phosphate-mannose:protein O-mannosyl transferase, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .  650    .  660    .  670    .  680    .  690    .  700    .  710    .  720    .  730    .  740    .  750    .
# Score Template Links and tools%idFirst MSSSSSTGYSKNNAAHIKQENTLRQRESSSISVSEELSSADERDAEDFSKEKPAAQSSLLRLESVVMPVIFTALALFTRMYKIGINNHVVWDEAHFGKFGSYYLRHEFYHDVHPPLGKMLVGLSGYLAGYNGSWDFLLEIYPDYLDYVKMRLFNASFSALCVPLAYFTAKAIGFSLPTVWLMTVLVLFENSYSTLGRFILLDSMLLFFTVASFFSFVMFHNQRSKPFSRKWWKWLLITGISLGCTISVKMVGLFIITMVGIYTVIDLWTFLADKSMSWKTYINHWLARIFGLIIVPFCIFLLCFKIHFDLLSHSGTGDANMPSLFQARLVGSDVGQGPRDIALGSSVVSIKNQALGGSLLHSHIQTYPDGSNQQQVTCYGYKDANNEWFFNRERGLPSWSENETDIEYLKPGTSYRLVHKSTGRNLHTHPVAAPVSKTQWEVSGYGDNVVGDNKDNWVIEIMDQRGDEDPEKLHTLTTSFRIKNLEMGCYLAQTGNSLPEWGFRQQEVVCMKNPFKRDKRTWWNIETHENERLPPRPEDFQYPKTNFLKDFIHLNLAMMATNNALVPDPDKFDYLASSAWQWPTLNVGLRLCGWGDDNPKYFLLGTPASTWASSVAVLAFMATVVILLIRWQRQYVDLRNPSNWNVFLMGGFYPLLAWGLHYMPFVIMSRVTYVHHYLPALYFALIILAYCFDAGLQKWSRSKCGRIMRFVLYAGFMALVIGCFWYFSPISFGMEGPSSNFRYLNWFSTWDIADKQEALast
1 -55.8001t9f_A mol:protein length:187 protein 1d10  ali model follow..  26  2................................................................................................................................................................................................................................................................................................................................................SDEDFVTCYSVLKFINAND-GSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALN----AKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVIC--------NGDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSIT-GGSAWKVAEGIYIKHQQKD............................................................................................................................................................................................................................... 186
2 -53.7003mal_A mol:protein length:199 Stromal cell-derived factor 2-like protein  ali model follow..  24  2....................................................................................................................................................................................................................................................................................................................................PLGSASAAASGKEGVEITYGSAIKLMHE--KTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPG----TTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPISGNL-EVSCFGDDTNSDTGDHWKLIIEG------SGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIRE-KKADNIWLAAEGVYLPLNESSK.............................................................................................................................................................................................................................. 199
3 -24.6005ezm_A mol:protein length:578 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferases of PMT family  ali model follow..  16  5......................................PQPTSQQRASVASSQSTQGAVGWSAATGWVVLFVAVALVVWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTIRPPFHMWVTVVGYELFG---------------LGEWQARLAVALSGLLGIGVSMMAARRW-FGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDAS--VAARRGWMVACWAAMGVAILTK--GLVGIALPGLVLV--VYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLV......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 254
4 -21.5006ftg_5 mol:protein length:705 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A  ali model follow..  11  2..............................................TKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFAVLRFESVIFDPYFNYRTTRFLAEEGFYFDDR-PLGRITSAAIYHVLHFFHI-------------RNVCVFLAPLFSSFTTIVTYHLTKELK-DAGAGLLAAAMIAVVPGYISRSVAGSYDGIAIFCMLLTYYMWIKAVKTGSIYWA-------AKCALAYFYMVSS-WGGYFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQIS............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 255
5 -21.0006c26_A mol:protein length:718 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3  ali model follow..  12  2................................................GSDRSCVLSVFQTILKLVIFVAIFGAAISSRLFAVIKFESIIFDPWFNYRATKYLVNNSFYFDDR-PLGR-LMTTSAFIW-----HALRNWLGLPIDIRNVCVLFAPLFSGVTAWATYEFTKEIK-DASAGLLAAGFIAIVPGYISRSVAGSYDAIAITLLMVTFMFWIKAQKTGSIMHA-------TCAALFYFYMVSA-WGGYFITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDHMAAL............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 270
6 -19.1003qr5_A mol:protein length:185 Cardiac Ca2+ release channel  ali model follow..  11  63......................................................................................................................................................................................................................................................................................................................................................................................................VEKWKFMMKTAQGGGHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKL-AFDVGLQEDTTGEACWWTIH--ASKQRSEGEKVR-VGDDLILVSVSSERYLHLSYGN------SSWHVDAAFQQTL.................................................................................................................................................................................................................................................. 179
7 -18.8003jrr_A mol:protein length:226 Inositol 1,4,5-trisphosphate receptor type 3  ali model follow..  13  10...............................................................................................................................................................................................................................................LHIGDIVSLYAEG-GFISTLGLVD-----DRCVVEPAAGDLDNPPKKFRDCLFKVCPMNRYSAQKQYWKAKQTKQDKEKIADVVLLQKLQHAAQMEQKQNDVVKYGSVIQLLHMKSNKYLTVNKRLPALLEKNAMRVTLDATGNEGSWLFIQPFWKLRSNGDN------VVVGDKVILNPVNAGQPLHASNYELSDNAGCKEVNS------VNCNTSWKINLF........................................................................................................................................................................................................................................................................................................ 226
8 -17.8003waj_A mol:protein length:875 Transmembrane oligosaccharyl transferase  ali model follow..  10  10............................................................KYWHLSVLVIAALISVKLRILNPWN-----NDPWYYYRLIENTIHNF-WFDPYPPFLVYLGSIAGIIFSATSGESLRA----------VLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGQFLQRSILGFNDIWEAFWQVSALGTFLLAYNRWKGNLTARQMAYPVIAGITIGLYVLS-WGAIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFST.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 273
9 -16.2003hsm_A mol:protein length:213 Ryanodine receptor 1  ali model follow..  11  85.....................................................................................................................................................................................................................................................................................................................................................................................................LANTVEAGVESSQGGGHRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKL-AFDVGLQEDATGEACWWTMH--ASKQRSEGEKVR-VGDDLILVSVSSERYLHLSTAS------GELQVDASFMQT................................................................................................................................................................................................................................................... 201
10 -15.5003rce_A mol:protein length:724 Oligosaccharide transferase to N-glycosylate proteins  ali model follow..  12  18.................................................................ILILIAFAFSVLCRLYWVDQLMITTNDGYAFAEGARDMIAGFHQPNDLSYFGSSLSTLTYWLYSILP----------FSFESIIL-YMSTFFASLIVVPIILIAREYK-LTTYGFIAALLGSIANSYYNRTMSGYYDTLVLVLPMLILLTFIRLTINKD-------IFTLLLSPIFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHRKEKIFYLAIALMIIALSMLAWQYKLALIVLLFAI.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 253
11 -15.3001xzz_A mol:protein length:246 Inositol 1,4,5-trisphosphate receptor type 1  ali model follow..  111.....................................................................................................................................................................................................................................................................................................................................................................................................ADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLP--ALLEKNAMRVTLDEAGNEGSWFYIQ--FYKLRSIGDSVV-IGDKVVLNPVNAGQPLHASSHQLVD---GCNEVNSVNCNTS.................................................................................................................................................................................................................................................. 232
12 -15.2005y9v_A mol:protein length:208 Ryanodine receptor 1  ali model follow..  12  82.....................................................................................................................................................................................................................................................................................................................................................................................................LVTAAGSETGKGTGSGHRTLLYGNAILLRHLNSDMYLACLSTSSSQDKLAFDVGLQ--EHSQGEACWWTLH--ASKQRSEGEKVR-VGDDLILVSVATERYLHTTKEN------EVSIVNASFHVT................................................................................................................................................................................................................................................... 197
13 -14.7005ogl_A mol:protein length:713 Undecaprenyl-diphosphooligosaccharide--protein glycotransferase  ali model follow..  12  18.................................................................ILILIAFAFSVLARLYWVDQLMITTNDGYAFAEGARDMIAGFHQPNDLSYFGSSLSTLTYWLYSILP-----------SFESIIL-YMSTFFASLIVVPIILIAREYK-LTTYGFIAALLGSIANSYYNRTMSGYYDTLVLVLPMLILLTFIRLTINKD-------IFTLLLSPVFIMIYLWWYPSSYSLNFAMIGLFGLYTLVFHRKEKIFYLTIALMIIALSMLAWQYKLALIVLLFAI.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 253
14 -10.9004l4h_A mol:protein length:547 Ryanodine receptor 2  ali model follow..  14...............................................................................................................................................................................................................................................LRTDDEVVLQCTATIHKEQQLCLAAEGFGNRLCFLESTSNSKNVPPDLSICTFVLEQSLSV----RALQEMLANTVEKSEGQVDVEKWKFMMKTAQGGGHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQEDTTGEACWWIHPASKQRSEGESEAAQGYLIGGDVLRLLHGHMDECLTVPSGEHG-EEQRRTVHYEGGAVSVHARSLWRLE---TLRVAWSGSHIRWGQPFRLRHVTTGKYLSLMEDK------NLLLMDKEKADVKSTAFAFRSSKEKLDVGVRKEVDGMGTSEIKYGDSICYIQHVDTGLWLTYQAVDVKSARMGSIQRKAIMHHEG-----HMDDGLNLSRSQHEESRTARVIRSTVFLFNRFIRGLDALSKKVKLPTIDLPIESVSLSLQDLIGYFHP----LKNRQNLFQEEGMINLVLECI------DRLHVYSSAAHFADVAGREAGESWKSILNSLYELLAALIRG......................... 543
15 -10.8005z10_A mol:protein length:2547 Piezo-type mechanosensitive ion channel component 1  ali model follow..  351.TPREDEEHELELDHLEPEPQARDATQGEMPMTTEPDLDNCTVHVLTSQSPVRQRPVRPRLAELKEMSPLHGLGHLIMDSYVCALIAMMVWSIMYHSWLTFVLLRHQLAMLCSPCI--LLYGLTLCCLRYVWAMELPELPTTLGLHQLGLEHTRYPCLDLGAMLLYLLVTGIYVKYWIYVCAGMFIVVS----FAGRLVVYKIVYMFLFLLCLTLFQVYYTLWRKLLRVFWWLVVAYTMLVLIAVYTFQFQDFPTYWRNLTGFTDEQLGDLGLEQFSVSELFSSILIPGFFLLAC--ILQLHYFHRPFMQLTDLEHVPPPGTRHPRWAHRQDAVSEAPLLEHQEEE------------------------EVFREDGQSMDGPHQATQVPEGTASKWGLVADRLLDLAASFSAVLTRIQVFVRRLLELHVFK--VWVALKEVSVMN-----------LLLVVLWAFALPYPRFRPMASCLSTVWTCI-IIVCKMLYQLKIVNPHEYSSNCTEPFPNNTNL------------------------------------------QPLEINQSLLYRGPVDPANW---------FGVRKGYPNLGYIQN----HLQILLLLVFEAVVYRRQEHYRRQHQQAPLADGTRQRLDQDLLSCLKYFINFICFLMAVNVIGQRMNFMVILHGCWLVAILT------RRRREAIARLWPNYCLFLTLFLLYQYL----LCLGM--PPALCIDYPWLIKW........ 1079
16 -10.0003uj0_A mol:protein length:604 Inositol 1,4,5-trisphosphate receptor type 1  ali model follow..  13  9...............................................................................................................................................................................................................................................LHIGDIASLY-TNGFISTLGLVDDRAVVQPEAGDLNNPPKKF------RDALFKLAPMNRYSAQKQFWKAAKPGANSTTDHHAADLEKKQNETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYKLRSIGDSDNKDDILKGGDVVRLFHAEQEKFLTADEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDPARGGA---YWNSLFRFKHLATGHYLAAEVDP..................................................................................................................................................................................................................................................................... 320
17 -9.2001sr4_A mol:protein length:206 Cytolethal distending toxin subunit A  ali model follow..  14  64................................................................................................................................................................................................................................................................................................................................................................................MGQNGALLTVWALAKRNWLWAYPNIYSQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAY------GNGLIHDIC----SLDKLAQEFELLPTD-------------SGAVVIKSVSQGRCVTYNPVSTTFYSTVTLSVCDGATEPSRDQTWYLA.......................................................................................................................................................................................................................................... 196
18 -9.0502bl2_A mol:protein length:156 V-TYPE SODIUM ATP SYNTHASE SUBUNIT K  ali model follow..  11  15..........................................................................................................................................................AVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKF---GQALILQLLPGTQGLYGFVIAFLIFINLGSDMSVVQGLNFLGASLPIAFT------GLFSGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVISFLLV........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 153
19 -9.0304jkq_A mol:protein length:606 Ryanodine receptor 2  ali model follow..  14...............................................................................................................................................................................................................................................LRTDDEVVLQCTATIHKE--LCLAAEGFGNRLCFLESTSNSKNVPPDLSICTFVLEQSLSVRAL-----EMLANTVEKSEGQVDVEKWKFMMKTAQGGGHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQETTGEACWWTIHPASKQRSEGESEAAQGYLIGGDVLRLLHGHMDECLTVPSGEHG-EEQRRTVHYEGGAVSVHARSLWRLE---TLRVAWSGSHIRWGQPFRLRHVTTGKYLSLMEDK-------NLLLMDKEKADVKSTAFTFRSSKEKLDVGVRKEVDGMGTSEIKYGDSVCYIQHVDTGLWLTYQSVDVKSVRMGSIQRKAIMHHE----GHMDDGISLSRSQHEESRTARVIRSTVFLFNRFIRGLDALSKKAKASTVDLPIESVSLSLQDLIGYFHP-----LKNRQNLFQEE----MINLVL--ECIDRLHVYSSAAHFADVAGREAGESWKSILNSLYELLAALIRGNRKNCAQFSG............... 553
20 -9.0205vox_S mol:protein length:164 V-type proton ATPase subunit c`  ali model follow..  19..........................................................................................................................................................GFAGCAAAMVLSCLGAAIGTAKSGIGIAGIGTFKPELIMSLIPVVMSGILAIYGLVVAVLIAGNLSPTEDYTLFNGFM--HLSCGLCVGFA------CLSSGYAIGMVGDVGVRKYMHQPRLFVGIVLILIFSEVLGLYGMIVALILNT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 160

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.