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Query: [G] KOG3893 Mannosyltransferase, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MITFLEVFVYFYFFPLLVFITLQYPRWTFNKWKALLPVSAYISFYFIIISSFSTHLNILYFNLSKSMVSFAQVPLEEYLNLLGHSLLTSIIYVMLKRRFYEQSVYNAKNGMLVYVNAIFAVVGIYCSVVHKSILQIGVTLTFICPMLSFLLCFRIIISQKAALVSIGISTLYYCFVQFMEVKSALISYDRSLFKFYPIDLFVLLLSQSFICIIAFGVSDFINFQKEERNFRGKSNSAFYNDFIQSFKSEDLIQEYESSLLLEPSLRLRISYLALFLKNTLQFGYIRKKENVNLNLVKTPKYDDLTKMNLSSSTANTLIKGIQSYNFQNYEKAYSLLAAGVTNSLLEWTNTSVSDKEYLRIQCFIQSCLQYRLTQDEKYLIDLDVKVCSLFNTSAREALIHYAKAMKLLSKYNSRENMITKLRESSLYLLYAPTDAFLLLLLGLLMRLVLLNYGIWHDRRSALKFTDIDYFVFSDASKYVSIGMSPYMRDTYRYTPMLAILLLPTQYGFPSWGKYLFSISDLIAGWLMIKLLSRRISYKRSLIYSSFWILNPFVAIISTRGNCEAILGILSIALLYLIEKKSVWLASLILGFSVHFKIYPFMYGIAFLVYFSKPKKGSTFMEKFLSLLSINQLKIVVGSLFMFTICNLLMYYLYGSPFLEHTYLYHFGRTDHRHNFSLHHLNLYYESSFGAKASSLFAFLPQLSLCMLIPLVFGKKNLPGTLFAQTFAFVTFNKVCTSQYFMWYLVFLPLVLPNSKLLSKKGLICLSLWIIGQLLWLISAYNLEMLGKSVFIPLWLSGLLFFFFNVYELKIILDSLLast
1 -12.1005ezm_A mol:protein length:578 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferases of PMT family  ali model follow..  9  9.........................................................................................................................................................................................................................................................................................................................................................................................................................SQQRASVASSQSTQGAVGWSAATGWVVLFVAVALVVWFVSLDMRHLVGP--EGRYAEISREMFASGDWVTIRNALKY----FEKPPFHMWVTVVGYELFEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLRGWMVACWAAMGVAILTK--LVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHW--RYTSNIHSRSGSVFYFLPLVIGGFL-AGIFPKLWTAMRAPVEGTQARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILA................................................................ 360
2 -10.4005z10_A mol:protein length:2547 Piezo-type mechanosensitive ion channel component 1  ali model follow..  8  438MMVWSIMYHSWLTFVLLLWACLIWTVRSRHQLAMLCSPCILLYGLTLCCLRYVWAMELPELPTTLGPVSLHQLGLEHTLDLGAMLLYLLTFWLLLRQFVKEKLLKKQKVPAAYVCAGMFIVVSFAGRLVVYKIVYMFLFLLCLT--VYYTLWRKLLRVFWWLVVMLVLIAVYTFQFQDFP---TYWRFTDEQLGDLGLEQFLFILIPGFFLLACIL---------------------QLHYFHRPFMQLTDLEHVPPPGTRHPRWAHRQDAVSEAPLLEHQEEEEVFREDGQSMDGPHQATQVPEGTASKWGLVADRLLDLAASFSAVLTRIQVFVRR-----LLE-----------LHVFKL---VALYTVWVALKEVSVMNLLLVVLWAFALPYPRFR------------------------PMASCLSTVWTCIIIVCKMLYQLKIVNPHEYSSNCTEPFPNNTNLQPLEINQSLLYRGPVDPANGVRKGYPNLGYI------------QNHLQILLLLVFEAVVYRRQEHYRRQHQQAPLPAQAVCADGTRQRLDQDLLSCLKYFINFFFYKF---EICFLMAVNVIGQRMNFMVILHGCWLVAILTRRRR--EAIARLWPNYCLFLTLFLLYQYLLCLGMPPALCIDYPWRWSKAI--------PMNSALIKWLYLPDFFRAPNSTNLISDFLLLLCASQQWQVFSAERTE-----FIHCRSYLDMLKVAVFRYLFWLVLVVVFVAGATRISI-----FGLGYLLACFYLLLFGTTLLQKDTRAQLVLWDCLILYNVT-VIISKNMLSLL 1230
3 -9.4705mqf_S mol:protein length:2752 Serine/arginine repetitive matrix protein 2  ali model follow..  5  1..........................................................................................................................................................................MY----------NGI---------GLPTPRGS----TN-----GYVQRNLSLVRGRRGERPDYKGEEELRRLEAAL------VKRPNPDILDHERKRRVELRCLELEEMMEEGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTETHQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSP............................................................................................................................................................................................................................................................................................................................................................................................. 232
4 -9.4105oql_c mol:protein length:785 Putative U3 small nucleolar ribonucleoprotein protein  ali model follow..  7  490...............................................................................................................................................................................LEAELVAKRAWTLAGEATAA--LGEDMEF-VGKPVPVVTEEVSESIEELIKRRILAGRRRPDMFGNPHGVRRGLVDVEDTKAKQSLAEIYEEEAVKKANPDAYVSAADEKLRRDEEEIKRMWKEISDALSSWHYKPKPPAPTLTVVSDVATVAMEDAQPATAQGVAGGVYAPSKDTAEKGEVVTKAGIPIAKQEMSREEKLRRRRREKERIRKAGGLDGGKPVSEKEKEKKETVAQLKKSGVKVINRKGEVVGLDGKKVGEKKVQSSGAYKL................................................................................................................................................................................................................................................................................................................................................................................ 785
5 -9.0005oqm_Q mol:protein length:747 Transcription initiation factor IIF subunit alpha  ali model follow..  7  350.........................................................................................................................................................................................WVMEDNTWVGIPADKVYKFTARNKYATXXXXXXXXXXXXLTIDEAEKRMDKKS-----GEVPRWLMKHLDNIGTTTTRYDRTRRKLKAVADQQAMDEDDRDDNSEVELDYDEEFADDEEAPIIDGNEQENKESEQRIKKEMLQANAMGLRDEEAPSEN--ELFGEKKIDEDGERIKKALQKTELAALYSSDENEINPYLSESDIENKENESPVKKEEDSDTLSKSKRSSPKKQQKKATNAHVHKEPTLRVKS---------------KNCVIILKGDKKILKSFPEGEWNPQTTKAVDSSNNASNTVPSPIKQEEGLNSTVAEREETPAPTITEKDIIEAIGDGKVNIKE------------FGKFIRRKYPGAENKKLMFAIVKKLC-HMELKKE.......................................................................................................................................................................................................................................... 747
6 -8.7306ftg_5 mol:protein length:705 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A  ali model follow..  9  23..................................................................................................................................................................................................................................................................................................................................................................................................................................................LSMAAVLSFSTRLF-----AVLRFESVIHEFD-PYFNYRTTRFLAEEGFYKFH-DDRAWYPITSAAIYHVLHFFHIVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGDNEGIAIFCMLLTYYMWIKAWAAKCALAYFYMVSS-LINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAAFGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGALLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSM----------YFSAVMVRLMLVLAPVMCILSGIGVSQVLSTY 429
7 -8.5106c26_A mol:protein length:718 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3  ali model follow..  9  21..................................................................................................................................................................................................................................................................................................................................................................................................................................................FVAIFGAAISSRLF-----AVIKFESIIHEFD-PWFNYRATKYLVNNSFYKF--DDRTWYPHALRNWLGLPIDIRNVCVLFAPLFSGVTAWATYEFTKEIKDASAGLLAAGFIAIVPGYISRSVAGDNEAIAITLLMVTFMFWIKAHATCAALFYFYMVSA-ITNLIPLHVFLLILMGRYSSKLYSAYTTWYAIGTVASMQIPFVGFLPIRSNDHMAALGVFGLIQIVAFGDFVKGQISTAKFKVIMMVSLFLILVLGVVGLSALTYMGLIAPWTGRFYSLWDTNYAKIHIPIIASVSEHQPVSWTHFLIWLFPAGVFLLFLDLKDEHVFVIAYSVLCS----------YFAGVMVRLMLTLTPVICVSAAVALSKIFDIY 428
8 -8.3805yx9_A mol:protein length:931 Short transient receptor potential channel 6  ali model follow..  9  222....................................................................................................................................................................................................PIILAA-YEIVHTLLRKGARIERPHDYFCKCNDCNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVLPFLALIYWFAPCSKMGKIMRGPFMKFVAHAAS--LLVMNAADRFEGTKLLPNETSTDNAKQLFRMKTSCFSWMEMLIISWVIGMI-----------------------WAECKEIWTQGPKEYLFELWNMLDFGMLAIF-----------AASFIARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAI--------AVVLSFSRIAYILPA-SFGPLQISLGR-----------TVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIGAKQNEAF------TTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFARAKLWFSYFE............................................................ 755
9 -8.1704v1n_Q mol:protein length:734 TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT ALPHA  ali model follow..  7  345.........................................................................................................................................................................................WVMEDGSYEAGNSDSYVLLSVEGSFTMIPADKVYKFTARNKYATLTIDEAEKRMDKKSGEVPRWLMKHLDNIGTTTTRYDRTRRKLKAVADQQAMDEDDRDDNSEVELDYDEEFADDEEAPIIDGNEQENKESEQRIKKEMLQANAMGLRDEEAPSGN--ELFGEKKIDEDGEKIKKALQKTELAALYSSDEDEINPYLSESDIENKENEPSVKKEEDIDSLSKSKKSSPKKQQKKTANAHVHKEPNLRVKSIKDCVIILKGDKKVLKSFPEGEWNPHAAKIKDISGNESNAVSAPIKKEKPLESIVVQE---------------------TPAPLITEQDIIDAIGDGKVNVKE-------FGKSIRRRYPGAENKKLMFAIVKKLC-HMELKKEQVY....................................................................................................................................................................................................................................... 733
10 -8.1005cwh_A mol:protein length:172 Designed helical repeat protein  ali model follow..  8  7.........................................................................................................................................................................................................................................................................................................NERVKQLAEKAKEATDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEAT............................................................................................................................................................................................................................................................................................................................................................................................... 141
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.