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Query: [S] KOG4147 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAPGEVTITVRLIRSFEHRNFKPVVYHGVNLDQTVKEFIVFLKQDIPLRTNLPPPFRNYKYDALKIIHQAHKSKTNELVLSLEDDERLLLKEDSTLKAAGIASETEIAFFCEEDYKNYKANPISSWLast
1 -9.3106byh_C mol:protein length:87 Polyubiquitin-B  ali model follow..  13  7...........FVKTRHSYKHGLIENSTITLEVEPSDTIENVKAKIQDKEGIPPDQQVLIFSRKRL------------------------EDGRTLSDYNIQKESTLRL................. 80
2 -9.0801v2y_A mol:protein length:105 3300001G02Rik protein  ali model follow..  13  3SGSSGMTVRVCKMDGEVMP--------VVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYV---------------YHLTSAGEKLTEDRKKLRDYGIRNRDEVSFIKK.............. 95
3 -8.2501wju_A mol:protein length:100 NEDD8 ultimate buster-1  ali model follow..  19  16.....ATIEVFLPPRLKKDRKNLL---ETRLHITGRELRSKIAETFGLQE-----------NYIKIVINKK-----------------QLQLGKTLEEQGVAHNVKAMVLELKQ............ 93
4 -8.0202gbj_A mol:protein length:84 Ubiquitin  ali model follow..  13  4...........FVKTLTGGGGGGGGGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL------------------------EDGRTLSDYNIQKESTLHL................. 77
5 -7.9203dbl_I mol:protein length:88 NEDD8  ali model follow..  12  17....................VKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQM------------------------NDEKTAADYKILGGSVLHL................. 81
6 -7.8805hps_B mol:protein length:83 Ubiquitin variant P1.1  ali model follow..  16  10....................VKTLRGWSITLEVEPSDTIENVKAKIQDKEGIPPDQQILIFARKKL------------------------EDGRTLSDYNIQEKSSLYL................. 74
7 -7.8703dbh_I mol:protein length:88 NEDD8  ali model follow..  12  17....................VKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQM------------------------NDEKTAADYKILGGSVLHL................. 81
8 -7.8606CPM Entity 2(prereleased)  ali follow..  18  9....................VKTPTGKFISLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFRQTWASKQ--------------------LEDGRTLSDYNIQKESTLHL................. 77
9 -7.8605ucl_A mol:protein length:89 Polyubiquitin-B  ali model follow..  13  12....................VQTITVMRIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGMQL------------------------EDGRTLSDYNIKRDSNLYL................. 76
10 -7.8502pjh_A mol:protein length:80 Nuclear protein localization protein 4 homolog  ali model follow..  11  4......SIIIRV------QSPDGVKRITATKRETAATFLKKVAKEFGFQNN-----------------------GFSVYINRNKTGEITASSSKSLHLLKIKHGDLL................... 75

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.