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Query: [E] COG0786 Na+/glutamate symporter, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNQIISIGALESFLIAISVLFLGHFINAKLPILTKFNIPEPIVGGLIVACVITALHFHGIDMEFSLPLQNVFMLMFFSTVGLAANYTQLIKGGAKVFLFLAVASVFIIIQNGVGVSLAAGLGLDPLLGLIAGSITLSGGHGTGAAWANTFAENYGLANTLEIAMASATFGLIIGGIIGSPVAQKLVDKHGIESEYGRGTQTHSRFPELVTYNEYEEDKVTAKKVIEILFILLICVTGAKYLEAWVKTFEIRWLMIPDFVYALFIGVFITNLLEVTKLRKVDAETVDILGTVSLSLFLAMALMSLKLWNIFDLALPFLVILAIQSVVLGVFCYFVTFKVMGANYDAAVISAGHCGFGLGATPTAVMNMGSVVKRFGPSPQAFMVVPIVGAFFIDIVNLIILQGYISFLGLast
1 -93.700PF03616.14; Q9KNC4_VIBCH/5-376; Sodium/glutamate symporter  ali follow..  100  1....ISIGALESFLIAISVLFLGHFINAKLPILTKFNIPEPIVGGLIVACVITALHFHGIDMEFSLPLQNVFMLMFFSTVGLAANYTQLIKGGAKVFLFLAVASVFIIIQNGVGVSLAAGLGLDPLLGLIAGSITLSGGHGTGAAWANTFAENYGLANTLEIAMASATFGLIIGGIIGSPVAQKLVDKHGIESEYGRGTQTHSRFPELVTYNEYEEDKVTAKKVIEILFILLICVTGAKYLEAWVKTFEIRWLMIPDFVYALFIGVFITNLLEVTKLRKVDAETVDILGTVSLSLFLAMALMSLKLWNIFDLALPFLVILAIQSVVLGVFCYFVTFKVMGANYDAAVISAGHCGFGLGATPTAVMNMGSVVKRFGP................................ 372
2 -9.640PF03390.15; Q5WJJ9_BACSK/33-442; 2-hydroxycarboxylate transporter family  ali follow..  14  21YFQKLPADMIGGFAIIMVAGMVLGEIGSRLPIIKSI---PAILALFVPSAFMFFGWLNETTVNATSNFLYFYIACLVAGSILGMNRVVLIQGITKMLVPLVAGTAVSM---AAGVGMGLLLGYEAKHTLFFIVVPILAG-GIGEGLSAGYSTILGIPAAELISIPAAIIGNIFAIIGAALLKQLGAKKPHLTGKGV-----VKTKGPVMPKSIDDTKPVNFALMGAGLLVACSFYVFGHLMESSLH--------IPAAILMILIAAIAKKLIPEQLEQGAFHLYKFVSTSFTWPLMVGLGLLFIPLEDVAGIISFSYVLICATVVFAMIATGYFVGQWLNMHPVDSGIVTG-CHSGLGGTGD-VAILSA-SDRMSLMPFAQVATRLGGAGTVILAT............ 409
3 -8.370PF05684.12; Q9FLW1_ARATH/79-442; Protein of unknown function (DUF819 topsan)  ali follow..  14  195.......STSIALSVSFLICKAAITLTTLFKIQGVMLP---AVTAITIVLATSFPDFFNSLAPSAETISLILMQVFFTILGATGSVWNVINTAPSI---FLFAAIQVMVHLAVTLVLGKLFCID-MKLLLLASNANIGGPTTACAMATAK----GWTSLVVPGILSGVFGVSIATFLGIGCGVFVLKR............................................................................................................................................................................................................................ 364
4 -8.050PF05145.12; Q5KZS5_GEOKA/38-352; Transition state regulatory protein AbrB  ali follow..  12  2.........................................MLGPAAALLLVGRF--LKGKLYWPVGIRNAALIPIGYTLGTSMTAGTLVEMGRQLPAMLLATVLILLFSFLVSCLVARWTRIPLRSVVTG---SIPGGLSQMLVLG----EELDGVDATIVTFFQVM---LMGVVFLVPLIALSPFFSGGAEAGTGAESGQGAHWS-----------------VGLVWLYLIVTVASAIIGRRIK--------LPT----LLGPIIGTSALVIAGTPAPHPAPLLDIAQIAMGAYLGLMLKPARIAEKGRAVLAAVVTGLALILFSMASAFVLT-ALHGVPYLTAF---------IALAPGGMDQMGILAREAHADLAVVTSYQMFRIFFILLVVPPVLK....... 314
5 -7.000PF15128.6; H3BBW6_LATCH/11-102; T-cell leukemia translocation-altered  ali follow..  19  1.................................................................................................................................................................................................................................................................................................SQVLDILFSFWKEFLQDWDSNDMRGVIFKLLL---LVLSLLVIHLAWKVYGSTVNDMYYRQGMGGQN-GGTPEAASHFTSWESVGSDPSKT............................ 89
6 -6.340PF03601.14; YEIH_ECOLI/18-326; Conserved hypothetical protein 698  ali follow..  14  3......................................................................................................................................................................................................................................LALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTI-YPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIG--AGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAI................ 161
7 -6.130PF13593.6; Q7CIJ9_YERPE/10-319; SBF-like CPA transporter family (DUF4137 topsan)  ali follow..  14  4.........................................LLVLILVVIIASIFPCEGETKVWFERLTTAAIALLFFMHGAKLSRAAIMTGMGHWKLHLVVFLSTFALFPLLGVGMNVLVPNVLTPTLYLG-FLYLCALPATVQSAIAYTSVAG--GNVAAAICSASASSILGVFLSPILVGMLMQ--------------------------TQGGDTDTLHAIGSIIMQLM---------------------VP-----FVVGHLSRPLIAKW--VERHKKLVNITDRSSILLVVYVAFSQGIWSQIDGWSLLAISVCSMVLLTVVLVVNTLAARWLGADEITIVFCGSKKSLANG--------IPMANVLFPASVVGVMVLPLMIFHQIQLMVCAVLAQHYA... 309
8 -5.850PF05122.13; H2K1U9_STRHJ/12-61; Mobile element transfer protein  ali follow..  23  15...................................................................................................................................................................................................................................................................................................................................................GREKHTAACTAPRCGFSADYDSRAAAELAARTHR................................... 48
9 -5.390PF07657.13; H3DGV7_TETNG/30-105; N terminus of Notch ligand  ali follow..  41  44...............................................................................................................................................................................................................................................................................................................................................FKVCLKEYQSRVHAAGPCSYGMGSTPVLGGN.......................................... 74
10 -5.360PF00019.20; H2LU35_ORYLA/290-392; Transforming growth factor beta like domain  ali follow..  21  9............................................................................................................................................................................................................................................................................................................................................FVDFKDIGLGYEA-YKCNGVCNPPMTSSPTNHAIVQTLLNLHSPDRTS-CCVPTISLLYHDNGVVTFNHKYEGMV. 97

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.