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Query: [S] COG2510 Predicted membrane protein, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst MMMASWQFWALMSAVFAALTAIFAKVGIQGINSDFATLVRTFVIIGALCLFLTVTGQWQKPGEISARSWLFLVLSGLATGASWLAYFRALQIGDASRVAPIDKLSVVLVALFGAAFLGERMSTINWIGILLIGCGVVLVALRVLast
1 -44.800PF00892.20; YDED_BACSU/160-296; EamA-like transporter family  ali follow..  15  1...AAAVVWGVLSGFAAAFYTLYAVGLLNKFDSLVVVGWAMIIGGFALGFIHPPWQL--DFQRLTAEAYAYILFVILFTMIAFWFFIKSLESLSPKETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILAL.. 137
2 -29.500PF06027.12; S35F2_HUMAN/35-334; Solute carrier family 35  ali follow..  17  12.....GQMLSLCICGTAITSQYLAERYKVNT-PMLQSFINYCLLFLIYTVMLAFRSGSDNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVG.. 146
3 -24.700PF08627.10; CRTP3_DICDI/55-397; CRT-like, chloroquine-resistance transporter-like  ali follow..  11  2......LIYVLLYIISGVINVVLLKKLMIKF-GFFLSQITNYGYLPIFLVAMWYKMYCTSDVPKETRNQYKFVIMGLLDAINGFFVVIGGVSTSGPLQQLLNQAIIPFTMIASFIFLRERYSLFQLGGAAVILGGVIVSLIP. 141
4 -24.300PF03151.16; D7TJE0_VITVI/103-390; Triose-phosphate Transporter family  ali follow..  15  145.....GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIVEGPQLMKH-LTKFLSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILVFGNKISTQTGIGTCVAIAGVAMYS... 288
5 -20.700PF08449.11; S35B4_DROME/6-325; UAA transporter family  ali follow..  12  164.....GIGLLTIALLVTAYMGIYQEVIYKKYHPSEALFFTHMLPLPGFLIMAGNIVQH-GLEWKFPLMLFYLLCNVVTQYVCISAVYVLTTECASLTVTLVVTLRKFVSLLFSIIYFRNPFTLNHWVGTILVFFGTIL..... 315
6 -20.500PF05653.14; NIPA2_HUMAN/8-302; Magnesium transporter NIPA  ali follow..  25  6.....GLGLAMSSSIFIGGSFILKKKGLLRLAR--------------------KGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVI.. 121
7 -19.600PF06800.12; Y169_LISMO/4-283; Sugar transport protein  ali follow..  17  143.NMKKGIITLLISSVGYVGYVVITRWF--DISGWDAILPQAIGMVVAGLLFSIKSEE-----KRFTKQTWLNMIPGVMWATGNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKEIIGVVLVIIGGTMIGIA. 280
8 -17.600PF16913.5; PUP2_ARATH/6-340; Purine nucleobase transmembrane transport  ali follow..  22  80.......................................................................AIVVGLLVGFDNYLYSYGLAYIPVSTASLIISAQLGFTALFAFFMVKQKFTPFTINAIVLLTGGAVVLALNS 151
9 -16.800PF10639.9; A7SF34_NEMVE/12-127; Putative transmembrane family 234  ali follow..  23  1.........LLGVALLWGVTNPFIKKGSAGIEDVKGKGAIRQFLAEIRYLIFNWK----------------YMVPFLLNQSGSVLFYLTLGSADLSLAVPINSLTFIMTTLTGRILGEESCKTETYIGMLLVVGGVSLCV... 116
10 -16.600PF07168.11; K4BNE7_SOLLC/41-401; Ureide permease  ali follow..  11  196.STYIGLAITFFGGACLSLFSPAFNLSTNDYAAFFYFSVSSSLLAMILNFTFLYR-SSLMCYVNDWDGRGWAFLAGLLSGFGNGLQFMGGQAAGYAAADAVQ-ALPLVSTFWGVLLFGERTYTLLAGMLIMFIAAVAILMAS. 361
11 -16.300PF04142.15; O16658_CAEEL/7-326; Nucleotide-sugar transporter  ali follow..  16  7......LISLVVLIVQTTALVLTLRYSQTQYLSSTAVVCAEIIKLITCFFVIYRNNGYRFSGMQTRADSLKVAVPAIMYVIQNNLLFFALKKLDAATYQVTYQLKILTTAIFSVTMLGKSLHRYNWMALILLTAGVALVQYPS 161
12 -14.900PF07857.12; O01810_CAEEL/4-351; Transmembrane family, TMEM144 of transporters  ali follow..  14  197.....AFITAIVAGFFYGMTFVPVIRMIDNPQLYPFYPQDGIIFITSTIIFVIYSIFRRNQPYAPPNLFLPGMAAGCLWAVAQTSFFVANQHLSQTVTFPIISQMPCIAAAWSIFYYREIRGKKNFAAMSITITGATLVGLS. 347
13 -13.900PF04657.13; Q7CQI5_SALTY/6-143; Putative inner membrane exporter, YdcZ  ali follow..  17  2......LIFLIAAGVGLVVQNSIMVRITQTSTILIAMLLNSLVGIVLFVTILWFKQGATGFGELVASVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLARSHGVTLRAMVGPAFGALLLVIGAWL..... 138
14 -9.880PF06379.12; RHAT_SALTY/1-344; L-rhamnose-proton symport protein (RhaT)  ali follow..  17  8.....GIFWHLIGAASAACFYAPFKQVKQ--TMWSVGGIVSWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIITLIVGTLMTPIIIHTEGGRMTLLGVFVALIGVGIVT... 152
15 -9.220PF13536.6; YJLA_BACSU/38-305; Putative multidrug resistance efflux transporter  ali follow..  14  129.....SVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLGMTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGIIATVLFFWATDMVRLAAVEATQSGEVIFALLGEIVLLSGVFSLLSFAGLFIIIAGMML..... 267
16 -9.030PF06123.12; Q8E9F0_SHEON/61-487; Inner membrane protein CreD  ali follow..  9  302.....GLLFIVLTFIMLFIFELGQKT---SLSIVQYILVGSAMALFYLLLLSLSEH-------------QAYLIAACIPVLSVSTYVGSATASLKRGVIVGTMLVSLYAVLYSILQLEDYALLMGTGLLVVVLLILMFVTRH. 426
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Multiple flexible structure alignment using partial order graphs. Bioinformatics. 2005 Mar 3;