FFAS03 results for COG3658

Query: [C] COG3658 Cytochrome b, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 .`
#	Score	Template	Links and tools	%id	First	`MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVGLFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVVALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAVHIAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKAALAAALSVAALAAAAILLLS`	Last
1	-39.000	`PF01292.20; Q6MN52_BDEBA/9-210; Prokaryotic cytochrome b561`	`ali follow..`	21	2	`.......QPLSLRLWHWFNALVILGLLGTAFLRKTFLDWHYVLGFTLGGLLIVRLLVGIFAVKKCPAAH---AAQSAWNLSKVPAGQKTHALHYTLVKTGYALFYLVTVFMVVSGLVMYFKNDL---------LAKETIEPVKEIHELMMWFFVAFVSGHILGVVIAENRQDKGLVSDMIHG....................................`	202
2	-9.840	`PF00033.19; CYB_STELO/18-204; Cytochrome b/b6/petB`	`ali follow..`	18	19	`......................................................................................................LLGLCLIMQILTGLFLAPDTTTAFSSVAHICRDVNYGWFIRYLHANGASMFFICLYAHMGRGLYYGSYMFQEVMATAFVGY...................................`	114
3	-9.280	`PF03188.16; ACFR2_ARATH/50-183; Eukaryotic cytochrome b561`	`ali follow..`	19	32	`............KLVHLTLQLTAFILSLIGKGIENFYSLHSWLGLACLFLFAFQWAAGFV--------------TYWYPGGSRNSRASLMPWHVFLG----ISIYALALVTATTGI......................................................................................................`	127
4	-8.730	`PF13301.6; E0UE20_CYAP2/13-153; Protein of unknown function (DUF4079 topsan)`	`ali follow..`	20	36	`.DVRKELIKKDFRNRHYQLGSILLAFMVIGTIGGMAVTYHLLVGLAMTGLIAISAALVQKGNEAAR--------------------------HILLNV----ALLGLFGWQAVSGMDI....................................................................................................`	137
5	-8.620	`PF14358.6; E1RE56_METP4/9-80; Domain of unknown function (DUF4405 topsan)`	`ali follow..`	15	1	`..................................................................................................LTDLLALISLVVMAGTGLVLFGSGGAGKNPDYINSFIGLNHQQWVLFHDWSALVFIILMVIHLA........................................................`	69
6	-8.180	`PF16357.5; B3PL24_CELJU/3-199; Putative PepSY_TM-like`	`ali follow..`	11	6	`...................................IRQWHWISSAICLVGMLLFAITGITLNHASQIPA-APLPEAVGQWLRDEHRILVAGRAAEWSDGEVYLSLAWMTIDTQAGDVFYEKTD------------RGWVSYFNDLHKGRNTGLVWFWFLDVFALA---------CIIFCVTGLVLLQRHAGSRPSTWPMVGLGLVLPWVLILLFI...`	196
7	-7.600	`PF01329.19; A0A0D2X0N6_CAPO3/3-94; Pterin 4 alpha carbinolamine dehydratase`	`ali follow..`	15	18	`........................................................WNEVAGRDAIRKDFFADFNQAFGFMTRIALKADKMDHHPEWFNVYNQVHITLSTHDCGGLSERD..................................................................................................`	82
8	-7.530	`PF15607.6; Q74VD8_YERPE/204-312; Bacterial toxin 44`	`ali follow..`	8	12	`.......WDHKPKIRD-QFKAYAVSRPLVGSGTRSKSYFHKYEEHDYFYDVWSNIHYGYVG----LSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCM------------IGYALYHQ.................................................................................................`	109
9	-7.190	`PF02046.15; K1WV72_MARBU/25-136; Cytochrome c oxidase subunit VIa`	`ali follow..`	12	35	`.AATSDLWR---KLSLYVVPPVLIIASVNAWVLWNEHWEHWRIQYPYQNIRTKNFFWG---------------------------DGDKTLFWND...........................................................................................................................`	106
10	-7.080	`PF13974.6; D8MT40_ERWBE/15-89; YebO-like protein`	`ali follow..`	16	1	`...........................................GFSVALVIVGLIAWYFVNRASVKASQQVQLLEALLEEQKRQNV....................................................................................................................................`	43

FFAS is supported by the NIH grant R01-GM087218-01

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