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Query: [R] COG3907 PAP2 (acid phosphatase) superfamily protein, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MITVPLFATSASGHTVKISKTTRQASTGPSTLNNRSTVPTIKTISLYSLPLSFYFWQVFGLLLVGLLFLALSRSEQLDWLISNYWFDPVGQNFPWEHNKWLDLLNHRLLKMALIATAIAALLWGIYRRNGRLVTTALLFGLGPLVIGILKATSAHSCPWDLVEYGGKALNYVLMDTAPPGAGPGHCFPGGHASSGFAVMALFFLFYPERPRLAMLCWFAGIGLGMLMGFGQIMRGAHFLTHNLWAGWWVWLSQLAAFWIISGYYQRIKGTELast
1 -33.700PF01569.21; A7EIU4_SCLS1/134-294; PAP2 superfamily  ali follow..  13  1..................................................................................................................................AVIGLLYSLITAAVFQVFLKWLIGGLRPHFLTVCKPNIPVTTQQETGNGLNDSLESFPSGHSTAAFAGFVFLSLYLNAKLKWKLIVTYAPILGATLIAGALTIDEYHNWYDCLAGAIIGTVMAFSAYRMV........... 156
2 -25.500PF14378.6; R7Y200_9ACTN/124-318; PAP2 superfamily  ali follow..  10  2........................................................................ELHLMDRALFLGHEPATVLHTIFGTGPSAHVLSSVYLWFLPLVPLALAAWLVWSRNITFGYWFATSQCLAWSLGTASYYALPTLGPGFQYSWLFYARKGVVRDGIEGAVQSVAGFASLHVAITLLVALMVQYTLRNR-----LVHWIFWINFVITVVATLYFGWHYVADDIAGVAIALVSFWL................ 195
3 -16.700PF14360.6; C5KL60_PERM5/83-154; PAP2 superfamily C-terminal  ali follow..  8  3.......................................................................................................................................................................................ADVFYSGHSIP-ITLSMMFWMDYTASVQERVFGSLLSVMALLIIVCTHF----HYTLDVFYGAGLTVIIWRLYHF............. 72
4 -12.900PF02681.14; R6Q3Q8_9FIRM/8-138; Divergent PAP2 family  ali follow..  9  4......................................................................................................................................PFWAAILSWALAQGFKTIRPIVT-SRLTGTGG--------------------MPSSHSSLVMALTTSVGK----YNGFDSALFAISLIFSFVVMYIRRAAGGHTPLEVFVGAILGIVV................... 131
5 -9.530PF04039.13; L0A0Y2_DEIPD/19-139; Domain related to MnhB subunit of Na+/H+ antiporter  ali follow..  20  4.....................................................................................................................................TVARAVFYLVLLFSLHMLWRGHNEP------GG-------------------GFIAGLITSAAMILHRVAFGKAVTLFNPLVLLPWGLGVAALTGLVPLLFGSAFLKSAY............................ 88
6 -9.310PF10043.9; M4S892_9SPHN/33-123; Predicted periplasmic lipoprotein (DUF2279 topsan)  ali follow..  10  18.............................................................................................................................................................................................THAYNSYLLAELLNARIGRKSGDRSSGALTAAVLASGLMIYSELYDAHKVSDVLFN-TGGAAFSVLRN.............. 90
7 -7.710PF01252.18; D3V286_XENBS/15-157; Signal peptidase (SPase) II  ali follow..  11  1.....................................................................................................................................LVVVVLILDLGSKQLVLQNFTLYESTPLIPY----------FNLTYAQNPGAAF----LVAIIISAVLLVMMYRSSAKQKLSNAAYALVIGGALGFDRLVHGFHWPTFNIADSAICIGAAFIIIESF........... 142
8 -7.520PF10261.9; N1Q6I4_PSEFD/84-317; Inositol phospholipid synthesis and fat-storage-inducing TM  ali follow..  10  128............................................................................................................................................................................................SGHV---FLLILGSAMLWLE-GFGVKAALGVAFLSWWMLLMTAAYF--HTWFEKVTGLLVAFLSIYTVY.............. 234
9 -7.270PF17197.4; A0A0B5DRJ0_9ACTN/32-182; Domain of unknown function (DUF5134 topsan)  ali follow..  22  6...........................................................................................................................................................................................AGGEALMGFGMAVMAVAAVAVPPSWAWTACAAVFGAAALRALWAARTDAHHLHHLAETSAMVYMAVTM................ 74
10 -7.230PF10990.8; F4L1I1_HALH1/25-109; Protein of unknown function (DUF2809 topsan)  ali follow..  11  2.......................................................................................................................................................................................DDGFIRPYLGDFLVVILIYCFVKSFLNTPVWPTALGVLAFSYAVETLQIVIGSSFEWLDLVAYTGGI..................... 85
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.