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Query: [R] COG4801 Predicted acyltransferase, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKHLLVPDNTRIDTSRIVVEGDVIVGNHSSIQYSISGDMVIMGEGVAVSGDVVACSDTRIDMWSKMGSNVEVGKNAYLGEFVSIEGKLTVEGDLDVGKEVKIKGGFVAKGWIVVRNPVPVIMFLFLYIREMMRLGRGEEIEKALEELFDESEEEHESESREPAEKILIIPTGTKITPEVIEVGGDAVVGNNCYLIGNLKAQSVETGNALILKGSIYSEGKINIGENSTIYGNLSSKGQVNIGRNTKVFGGIKAESVLLHENARVEGTIKAPSGLSFLRDAAEMPILADVNALGKVIPREVKEPVPRDGLLKAPEIIKIDSLIKTSAKAKNGFVPGREGMSARTVALGRTRRTGGVRRLRRRHEAGEHQSLast
1 -16.600PF16314.5; Q5LHM9_BACFN/5-659; Domain of unknown function (DUF4954 topsan)  ali follow..  10  23..NKVAVAEEFTTEFHHTRFSGEVKLGV--------FHSDFILPGGIKKHSGLVTLHNVTVGDNCCIENIQNYIANYEIGNNTFIENIILVDGLTQFGNGVETAVLNETGGR-----------EVLINDKLSAHQAYILALYRHRPELISRMKEITDYYSNKHASAVGTIGNHVMILNTGSI--KNVRIGDFCRICGTCRLYNGSINSN--------ESAPVHIGHGVICDDFI-ISSGSHVDDGAMLTRCFVGQACQLGHNYSASDSL-FFSNCQGENGEACAIFAGPYTVTHHKSTLLIAG---MFSFMNAGSGSNQSNHMYKLGPIHQGTLERGAKTTSDSYILWPARVGAFSLVMGRHVNHADTSN 361
2 -14.700PF04519.13; M9XFD8_MEIRD/14-112; Polymer-forming cytoskeletal  ali follow..  18  1..............................................................................................................................................................................TYLSEGSEIEGNLRAPGNTRIDGKIKGGDLEIGSNAQIEGDQIKANNIIVHG--QVSAQVIALGKLHITKSARVEGDVRAMSLDVEAGAVFVGRSQ.................................................................................................... 99
3 -9.280PF10833.8; C9R5V5_AGGAD/6-227; Protein of unknown function (DUF2572 topsan)  ali follow..  24  145......................................................................................................................................................................................................FNADETEWTLDKNVNAVIVAEGDLHIRGKGKISGSVITKGKLTLDEDIKV.......................................................................................................................... 194
4 -8.070PF00132.24; LPXD_BRUA2/240-275; Bacterial transferase hexapeptide (six repeats)  ali follow..  13  1...........................................................................DTVIGEGTKIDNLVQIAHNVRIGRFCLVAAHCGISG................................................................................................................................................................................................................................................................... 36
5 -7.640PF11999.8; Q12MX8_SHEDO/269-478; Protein of unknown function (DUF3494 topsan)  ali follow..  14  98...........................................................................................................................................................................SSQTLSAGLYKWGTDVLVSTDVTLNGG-VAGDVLMADGSSI--QVGGGTGAVIGTTAQFEGIVLAKKGITVNTGASVNGRLLAQTAVTLDQNTIT........................................................................................................ 210
6 -6.350PF16241.5; F2NL52_MARHT/175-263; Domain of unknown function (DUF4900 topsan)  ali follow..  10  51..........................................................................................................................................................................................................................GTGVWFTSRTLFDGPVHTNQQFRFYRTPWFGGEVTSAG.................................................................................................................. 88
7 -6.310PF03961.13; D7HB73_VIBCL/80-543; Flagellar Assembly Protein A  ali follow..  16  151................ALVAGKGTHISNDPNLLLASQAGMPLIKKNTIEVDSALCLNHVSVAGHIRFKGNVVIAGDIEPGMIVRATGSITVGGFIE-------SANVQAQGDIDVGKGI------------------------------------IGHMVTDDEERSCVVKSGGSIRANYAQ-YVELQAADSIHLGVHSIGNIIRCGNDLTVLDSKMTQGTL-------SAGNAKVGGKVNLGVEGDTATHVEAF................................................................................................................... 343
8 -5.670PF07959.12; W4YPG4_STRPU/114-532; L-fucokinase  ali follow..  6  273.....................................................................................................................................................................................NTVLDKCATREACIMDSIVPQGMDTSKPCIVE-YCHFKSPCHLGERCIVSNCVVQAPSSG--CPVSIPSFTFLHTAAVKTREGSTLYVTIFFDIR.............................................................................................. 364
9 -5.420PF05594.14; Q8PLI3_XANAC/3289-3387; Haemagluttinin repeat  ali follow..  11  1.................LVAGNNLVSEASKAINGVGILSGISASNTLQLGTRVQAGGSAALIAGNNLSLTPSALRDDNGLLRGGDAVSVTTGKDLIVGNDLQLHG......................................................................................................................................................................................................................................................................... 99
10 -5.240PF12421.8; Q8ZQF6_SALTY/965-1106; Fibronectin type III protein  ali follow..  22  1.......................................................................................................................................................................................................................LTPDGRLTA-KNADISGHINAISNVVIAEDCTIQGTLRAER--------ILGDI..................................................................................................... 49
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.