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Query: [S] COG5373 Predicted membrane protein, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLEAIALLAFVMALAAFLGGRRSAERLDREIESLKAEIARLAKEGMGEPGPDLATGRPSEAGVPSVAGTEATADGPWSRAREGAGTSHDESAAGRESGDGAIDGPVAPSAAAARAESLESRIGGRWPVWVGGLALALGGYFLVQYSIEAGLLSPAVRLTLAAIFGLALGVAGEVIRRRDVPAIADRFRNAMIPGVLTAAGAVTLFGVVYAAYGIYDFIGTGAAFVLLALVSLATVGLSLLHGQALAGLGLLASLLTPLFVSSGEPRPWVLFGFLAVAWLATLAASRLRRWSVVPTLANAGLGLWGLAYVALATPFEAPPVTFALLVMIAGVALIWPGRAERTAEPSGTTQIGAASEPGAWERLFTPPYLAISISAAIVATVLALLFISPAVDAARFPVSDFVVIVVALAAAGSLRPAAIYAALLAAFGAVAGTWSLTALSGVLAYLDPSFAGSPPEIVVPGRTAMLTAMTLSALFILLGGFVLARRPAGDRQFAALWAGIAAVVPNALLAMSFVMTGSFAFDLPHGLAAFAGGIFLLGLVEWLYRRSAGAGDADVDGGLPALGSFGLFVIGLHAWTDGLVTTLAIALLGAGYSFATRLRSWPVLPWVTVAGAVVILARIAWEPTIVGPGNLGTTPVFNALLPGYGIPALLLVASAYLLQAWPDLRVRNLLQALASLFVLLTLAILVRHAMNRGVLDSSVPTLGEQAIYTLLAIGASGIFMTLDGRSPSPVFRYGGMALGVLSMLSVLGAHLVGLNPYFSGELLGSLPFFDLLLIGYLLPAIGYFGLAWYARGRRPLPYVVALAVSGAILAFAWATLSVRRFWQGQNVADWKGFLQGETYTYSVVWLVLGVLLLVAGSRLDAKSIRIASAVLVFVAVLKVFLVDMSNLEGFLRALSFIGLGAVLIGIGRFYQKILSGSAGNAGEGARRALast
1 -98.400PF10101.9; B2U841_RALPJ/177-938; Predicted membrane protein (DUF2339 topsan)  ali follow..  16  1..........................................................................................................................GGNSVVRVGILVLFFGVAFLLKYAADNSLLPVEFRLAGVAVGAIVLLGIGWRLREK----------RPGYALVLQGGGVGVLYLTVFAATRVVPLLSPGMAFPLLVLICALAAGLAVKQAPALAFTGSAGGFLAPILISTGQGSHVALFSYYALLNAGIFAIAWFRAWRALNLLGFVFTFGIATAWGVLRYQPSLLASTEPFLILFFLMYVGIALLTALRRHVSLTNYVDGTLVFGTPLVAMGLQTGLVHHIPFAMAWSATALAAFYL--------------GIAGWLARRRASLGLLYEAMFALGVIFITLAIPLA-----------------------DGRTTSAVWALEGAAVVWLGVRQQRRLALAAGVLLQLAAGAAFAVDAVFDWAPQSGWAVLNSRYIGGVLIALAGVFSGWRLHGKAEVRAWLKAAPVLGIVASVWGLLWWLGSGSNEPLYAAFAVLTAWAAHGLRRKLDWALAEWPALALSPVLALISLAA------EHWVPSPLAGWGGLVWIAAVVLAFVLLRRQERDVKDRILAPLHTVLFWLICGVLATEGYWRLDAYVPEGTWSFAAWAYAYGALLALLAGAGWRIRWPIARFERAYLLWGAAPLAALLWLWSLASAASE--NAAPLFYLPILNPLDVAQLLVFLAIALWMRRVALRKLVPEPMVIGYAIGATLFIWANAVLLRTLH-PYTLDDLGASMLVQASLSMFWTVLALAVMVFATRRASRALWFTGGALLGVTVVKLFLFDLSRVTGVERIVSFIGIGVLLLLIGYLSP................. 760
2 -16.300PF12406.8; Q8WPH8_THEAN/26-124; Surface protein  ali follow..  15  1....................DRQLNPIDFDPNDDQHPLDPDQLIDQIEPSEQPAQQEPIEPQQPTQPSTEPEELQPETVTVEVPEPVTSEEPKESDQTEEQKHEEPEASPAPEPVDE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 97
3 -15.100PF16031.5; TONB_ECOLI/33-157; TonB polyproline region  ali follow..  1.....................HQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 96
4 -14.000PF05104.12; G3NLP1_GASAC/33-177; Ribosome receptor lysine/proline rich region  ali follow..  14  28..................KKKDKVSEKKGRGKKKEDKPNGKIPEPDETQEDVEADVVVEPAAAPVVAAAPEPERVPDLDVKPNAATAAPEPTTAPEPSPAVIERSPAPSPKEKKKKKVAK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 129
5 -13.800PF15356.6; G5C3D2_HETGA/23-136; Psoriasis susceptibility locus 2  ali follow..  18....................PPRLPLGPPIPGEPWPGAPPLFEDPPPPGPSHPWGDLPDSGVWPPEAPSTDPPQPPLPDDPWPAGPQPPANPWPPAPEVDHKPHNEPDLDPPREEYR........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 114
6 -13.300PF15231.6; F7IG15_CALJA/1-142; Variable charge X/Y family  ali follow..  10  1.......................MAPKKRASGPPAKAGETRKRKSSSEASPSTPKKKPQMPKEGKRGKAGPGGRGRKKRAAGEKMAAVGAPEAGSGPAPPGPSKPRSQELPPQELPPCQP........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 97
7 -13.000PF05887.11; Q581G0_TRYB2/1-129; Procyclic acidic repetitive protein (PARP)  ali follow..  1................MAPRSLYLLAVLLFSANLFAGVGFAAAAEGPEDKGLTKGGKGKGGKGTKVSDDDTNGTDPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 101
8 -12.800PF15677.5; H2NCC0_PONAB/1-152; Cell cycle exit and neuronal differentiation protein 1  ali follow..  1..............................MESRGKSASSPKPDTKVPQATTEAKVPPAADGKAPLTKSSKKEAPAEKQQPPAAPTTAPAKKTPAKADPALLNNHSNLKPAPTAPTV........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 87
9 -12.600PF17532.2; A0A0C7T7K4_EBVG/1-148; Family of unknown function (DUF5451 topsan)  ali follow..  17....................RQALETVPHPQNRGRLMSPKARPPRMQRRPRPPVAKRRRFPRSPQQVERPILPPVESTPQDMEPGQVQSPPQITGMIQLCQDRYTMRPPIYLPALLA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 113
10 -12.500PF12526.8; Q8JJN7_HEV/686-799; Protein of unknown function (DUF3729 topsan)  ali follow..  23...............................SGFSSCFSPLEPPASGSLPPAEIDPPVTVDAPSPSILALPRPSVFEQTTPPLDPAGDAAASAPPGAPGVPPAPARPVTHPSGPRRR........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 108
11 -12.500PF00748.19; V8P3C4_OPHHA/492-621; Calpain inhibitor  ali follow..  1.......................LDALSEGFSCSAPASTTETPAKSTGPSKPAVPTEQVISSAAASAVHSSVPKEAVIPGRKELDDAADLLADSLGQREPDPDDNKPVLDKVKEKAKAEY----------------------DKLGERDDTIPPEYR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 113
12 -12.400PF11336.8; Q63N34_BURPS/1-524; Protein of unknown function (DUF3138 topsan)  ali follow..  14  1MKKLICLLVAGALFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGASSQGAAAAAAAAPVDESSPDYGRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAGLS----------VTGYISTFGDLYLIKKTFGVGPMAPSAEITLMPNRGNGITLLQN----SRGNIGNNILNTAVVNVPLSAT--TTLVAGLVPSFGGYEVLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQ.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 278
13 -12.400PF03286.14; Q9Q8M7_MYXVL/1-193; Pox virus Ag35 surface protein  ali follow..  30..................ETATADDIFPEDIEIPSPKQSKTKRAPAPRKKPTPKTSKKKEEEPQPPPKEEEVKESDEEEEIVEESPKSPPESPHTTQNTSAAVDACDTMDSSDLKLVTEQIIKKALNAKVSAVSTILETIQAASVGRQYTMLTKNIEELRMLAMGGKEQVVRKKTRQTTK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 193
14 -12.400PF17818.1; A0A091D3D0_FUKDA/59-245; Keratinocyte-associated gene product  ali follow..  14..................TGPEKSRGTLAAPHPSLTTSVLPEAADNNADQSLEEEDLLVPNGSPSPARDALDNGDYGEPDYDWTTSPRDEESEETLEENRGYLEIEQSVKSFQSPASNIEEEDSHFFFHLIIFAFCVAIVYVMYHN----------RKIFLLVQS----------RKWRDGLCSKTVEYHRLDQNVHEA----MPSLKITNDYIF......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 187
15 -12.300PF05558.12; I1NLL8_ORYGL/3-193; DREPP plasma membrane polypeptide  ali follow..  15  69....................KKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAFILEKVAPFVPKEEPKPEPEAEAAAETTSREVAVEEEKKEEEAAPAEPAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 168
16 -12.300PF07432.13; D6YTW7_WADCW/2-121; Histone H1-like protein Hc1  ali follow..  1..................ALSKTINEMRSLFTGLIDDLQKAEAGNKAASQRVRTGTIRLEKVAKLYRKESIKAEKSSKGKKKAVKKTAKKAVAKKPAKKAAAKKKPAAKKAVAKKTTAAKKPAAK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 107
17 -12.300PF05395.12; W5N4Y1_LEPOC/11-190; Protein phosphatase inhibitor 1/DARPP-32  ali follow..  78..................SLRAVQRMAQAHMQALGASPPLEDPPEGVESEDGPPEAEMCEDSPCTPAESPEETKSDPESGAFDEQQDPLLTGSEVTTEEEAVPQTPEPLGKPSAEREGEE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 179
18 -12.200PF06459.12; M3ZZY1_XIPMA/4218-4479; Ryanodine Receptor TM 4-6  ali follow..  14  63..................................LGDVSELSGESSTADKKKTILRKKLNAFQKAAAKTAAPSESETEKADTETREKEDKPKEEAKEPAVEEKPKPRSSQPKEASPAFMSTIFTILDVYLNKILNYLARNF---YNLR------FLALFVCFAINFILL---YKVTGEAEEEEEDEEHRWDEEDDENTLFDMDEF-----------VLQESTGYMLPTL------FLAVFH-TVISLLCLVGYY-VPLVV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 262
19 -12.100PF06614.11; F7FEE8_MACMU/67-238; Neuromodulin  ali follow..  12  44....................EEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEENI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 143
20 -12.100PF16643.5; D5GG65_TUBMM/381-527; Unstructured region on cNMP-binding protein  ali follow..  1..........................VQQQLEMTARDRMDGDGENVLMRDAPATPTQSIDRLDISDLPKASSMNLTVPESRFTGPNDSNLVEPFDPDPYLPADFESLRSKSRRGSLA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 91
21 -12.000PF02948.15; F7CBF9_CALJA/21-192; Amelogenin  ali follow..  63..................HHHIPVVPAQQPVVPQQPMMPVPGQHSMIPTQHHQPNLPPPAQQPFQPQTVQPQPHQPMQPQSPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLPLEAWP........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 161
22 -11.800PF04702.12; VCLB_GOSHI/29-173; Vicilin N terminal region  ali follow..  32.................QCEESCKSQYGEKDQQQRHRPEDPQRRYEECQQECRQQEERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQRPERKQQCVRECRERYQENPWRREREEEAEEEETEEG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 145
23 -11.700PF15140.6; ERIC5_MOUSE/95-251; Domain of unknown function (DUF4573 topsan)  ali follow..  28....................KDDMLGTEEVKKDVEARTEVPSLKGDAEIKPLRLSSERDSPGAPQAGTMKFLQTAENILPLETTQELPPKEATGKGAQPQILEAIPKENSSPEIEGI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 124
24 -11.700PF15791.5; D2HNF9_AILME/244-371; Doublesex-and mab-3-related transcription factor C1 and C2  ali follow..  16  25...........................TPDPLLLQPEAPGGSPLAWTSAPSERQLQREAAEALVGLKDSSQPPRLTSSVPPNPAWISLLHPCGPPAPAGGRGFQPVGPSLRPSPAPSVALHIGH-----LGSISLL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 128
25 -11.600PF16617.5; W5MI93_LEPOC/795-917; Intersectin and clathrin adaptor AP2 binding region  ali follow..  12  1.............................KIPESDVPASLKPGAGSAPKVAARVTPTSAVSAGSQPPPAETPAAPPTTTAAGSNWADFSSTWPSNNSEKTEGDGWDAWPTQPSLTVP........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 88
26 -11.600PF11600.8; H2VC85_TAKRU/240-396; Chromatin assembly factor 1 complex p150 subunit, N-terminal  ali follow..  13  48..................EKREKKEKEERERREKKEKDEKEKAERLKAKEDLKKSKLEAKQEEKRKKEEEKRMKEEEKRLKEEKDRLKAEKAEITRFLQKSKIQQAPKTLAAACGKFAPFEIKENVYL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 157
27 -11.500PF16228.5; Q5HQV7_STAEQ/24-195; Domain of unknown function (DUF4887 topsan)  ali follow..  1................IYSFVDSSKKGNERLSDKTTQQEKKKDDKDKKEKKDKKSVEEKKNNTQQTQQVPQTQQTQQTQQTVQTPQRPTTQTPVRQNPQTGEKRAKEPKTDERKKTRQDSSNSKE................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 109
28 -11.400PF15512.6; F6U7T6_HORSE/381-555; Chromatin assembly factor complex 1 subunit p60, C-terminal  ali follow..  6...........................EKPVLSVRTPDTAKKTKSQTPQGSLPGPRLAEGTPTSRTQDPSSPGTPPPQVKQSPASTAAKDTPGTAPGARSSLPGSSEEKTLQPSSQN........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 95
29 -11.400PF17638.2; UL42_HCMVM/1-125; HCMV UL42  ali follow..  2...................................EPTPMLRDRDHDDAPPTYEQAMGLCPTTVSTPPPPPPDCSPPPYRPPYCLVSSPSPRHTFDMDMMEMPATMHPTTGAYFDNGWKWTFALLVVAILG--IIFLAVVFTVVINRDSANITTGTQASSG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 125
30 -11.300PF14755.6; D7P484_EAV/361-513; Intracellular membrane remodeller  ali follow..  5...........................APVSASVLDHILEAATFGNVRVVATEEQQRPVPAPRARHSVSPPGDVKDTATVPPVPKPRTKLAKPSPVQAPTPAPRTQPQDAVHSGLPK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 94
31 -11.300PF17061.5; L9L768_TUPCH/3-296; PARM  ali follow..  13  95........................SSTTGGVHFTPTSPEEHDQSTAEASVPTTGSQSPTEPSTVTSTPAPASSPSSLSVSPPEISSVPVTSNHSSTATNIQPTGAPTAPASPTEEHS----------------------------SGHTPTSHATVQPESKEKTPQATVLEPETCELMDTTTASPVVIMQEVEHALSSGSIAAITVTVIA--------------VVLLVFGVAA-YLKIRHSSYGRLLGSWGNYNNPLYDDS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 294
32 -11.300PF15762.5; G1P4D6_MYOLU/1-188; Domain of unknown function (DUF4691 topsan)  ali follow..  11..................GAQEGTAEGTAEGPAQLSEAPRGHVQSSECPVMGDQGLVSAHEVCGTQGEDKRPTGPVSEPELQEERPKLEEERLKPEVEALEERGPRPMASVVRSSHGPKR........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 112
33 -11.300PF11235.8; H3B103_LATCH/224-387; Mediator complex subunit 25 synapsin 1  ali follow..  11  8....................TQSKQVVPQAPPTVQSQTSLLSTPSQPSQLPPGSAQQVAPPGSLSAAQAAAKMAVEAANSQKPGLATRFFSSAVPNLSQHPNTSGVGPPFSQPPVPT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 104
34 -11.200PF12300.8; RHLB_XANCP/377-551; ATP-dependent RNA helicase RhlB  ali follow..  36..................DSVGTIFREAREQRAADEARRGGGRSGPGGASRSGSGGGRRDGAGADGKPRPPRRKPRVEGEADPAAAPSETPVVVAAAAETPAVTAAEGERAPRKRRR........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 134
35 -11.100PF00985.17; MSA2_PLAF7/102-272; Merozoite Surface Antigen 2 (MSA-2) family  ali follow..  47..................QNNSNVQQDSQTKSNVPPTQDADTKSPTAQPEQAENSAPTAEQTESPELQSAPENKGTGQHGHMHGSRNNHPQNTSDSQKECTDGNKENCGAATSLLNNSSNIASINKFVVLISATLVLSFAIFI................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 171
36 -11.100PF16601.5; H0XAD4_OTOGA/548-737; Rabosyn-5 repeating NPF sequence-motif  ali follow..  5.....................REIRPFQLQAGREPRTHLAYALDLGSSPVQSSTAPKTPSPCSAQEPVQIWSGPPVLGQEFLPQSSISQQDEVPSLNPFDEEDFSSPTEEATASAPATE......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 102
37 -10.900PF11914.8; EGR1_DANRE/403-498; Domain of unknown function (DUF3432 topsan)  ali follow..  1................................ATAAVQSSVSNISISASSPVSSYPSPITSYPSPVSSFPSPVNSCYSSPVHTSYPSPSIATTYPSATSTFQTQVATSFPTSVASNI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 85
38 -10.900PF01254.18; M3YT59_MUSPF/1-131; Nuclear transition protein 2  ali follow..  1................MDTKTQSLPNTHTQPHSNSRPQSHTCGPCTCSSHCQACGQSCGRSQSCSRSRSSSQSPTGRQGQSPYPSPPPRRQKHTMYSHHRPPRPTAHSCSYSKNRKNLEGKVNKR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 109
39 -10.900PF15576.6; L9KL33_TUPCH/16-260; Domain of unknown function (DUF4661 topsan)  ali follow..  14  63...........................VEHLGSKTRGSPKGAQAASSPQESGRLEAEEAVPKLGWDHVDSGGIRRPGVSPEEGLSTRGPEVEKPGRRQKLLSWLRGEPGASPRYLGGPEECLQ---------LTLHLLELLASALLALC---SRPLRAALDAL-GL---PLGLWLH-----------------------GLLSFLAALHGLHAVLSLLTAHPLFACLGLLQALVLAVSLRE............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 245
40 -10.900PF04538.12; H0W9V3_CAVPO/1-176; Brain expressed X-linked like family  ali follow..  1................MKKLCSGNEGKPEKERKAEDKLEPDDEGKIEKEEKTDHEGKPAFEGKLEGEGEPNVERQGKNEGKPEMQSKLGDEGSPQGEGNAESQARPENKQLPAEKHLAEDYVPRK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 109
41 -10.800PF15662.5; H2P8V7_PONAB/1-182; Spermatogenesis-associated protein 3 family  ali follow..  1.................................MKKVKKKRSEARRHQDSTSPHASSNSTSQQPSPESTPQQPSPESTPQQSSLETTSRQPASQALPAPEIRRSSRCLLSPDANVKA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 84
42 -10.700PF11244.8; V8P8R7_OPHHA/611-713; Mediator complex subunit 25 C-terminal NR box-containing  ali follow..  8...............................QPLHHLQQGSSGMLPHQPMGQTLGHQPPGQQQLQLPGQPLMHQAPGQQWPAQMAPRPQLQGQMLMNAGPRGPVSQPGLQQVPAPSIMEDDILRDLI................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 103
43 -10.600PF06513.11; Q25920_PLAFA/526-740; Repeat of unknown function (DUF1103 topsan)  ali follow..  40..................VKKKCKKKVKKGIKENDTEGNDKVKGPEIIIEEVKEEIKKQVEDGIKENDTEGNDKVKGPEIITEEVKEEIKKQVEDGIKENDTEGNDKVKGPEIITEEVKEEIKKQ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 146
44 -10.600PF03247.14; H3AKK6_LATCH/2-103; Prothymosin/parathymosin family  ali follow..  10  1..................SDAAADTTEEVSTKDLKEKISGKEKSEPGAETTDVNGEEEENGAEADEETPEKLNDEDEGDEEDEEEVDDEEEEDEEDEEEGQAVKRRADDDDNTGKKKQKT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 102
45 -10.500PF05466.12; F6R3X8_HORSE/2-233; Brain acid soluble protein 1 (BASP1 protein)  ali follow..  17  73..................EGEKDADAAKEDAPKAEPEQTEGAAEGKPEPPKDAKDGEQEQAAASGPAAGGDAPKASEAEAPAEPAPTKVDDKSKEGGEPTKTEAPAAPAAQETKSDG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171
46 -10.400PF12868.7; B8NBW3_ASPFN/561-699; Domain of unknwon function (DUF3824 topsan)  ali follow..  12  1..................KHRSRSRDLAE--AALAATGVGYAAHKYTQRRERKKAEQERERPRFDEDARQDSYGEPYSPEPYQHTALPPQSSEHQYYPNTNYFPPPPGSAPRPAGS............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 96
47 -10.400PF11029.8; B7PCU4_IXOSC/14-160; DAZ associated protein 2 (DAZAP2)  ali follow..  12  44..................................AKMYPAPGQGYGQAPPAPPQYAGASYPQQPVVPQANQTTVYHVPDAFDAGARFSANTPASIPPPPPGVMPNAAQLAAMQGNQVVLGQKKSTFLS--GT-----AG-----YTF............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 146
48 -10.300PF15240.6; G3RTV7_GORGO/1-150; Proline-rich  ali follow..  1..........................MLLILLSVALLALSSAESSSEDVSQEESLFLISGKPEGRHPQGGNQSQGPRPPPGKPQGPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 91
49 -10.300PF05786.14; G3J5P2_CORMM/14-857; Condensin complex subunit 2  ali follow..  10  1.....................RSVSGSLNSRSRDRIPLNDDAEERGKRINSRKALHDKQINQLKAAASGSRKSSLGIEDIENAAPGSNAGTPRASRGLDLSDDPIMINGVNLTPVKRVP--ILANFEEWM-------------KMATDN-------KINATNSWNFALI---DYFHDMSLLKEGDGVNFQKASCTLDGC--VKIYTNRVVATETGKLLSKPKKKSQRSEATLAPSFTSLQLKKFELEFSV------PLFKKASAGAKGLLLNHLMIDSQGRIVFDS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 273
50 -10.200PF02389.15; SPR1A_RAT/17-150; Cornifin (SPRR) family  ali follow..  46...............................EPCQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCHPKAPEPCHPVVPEPCQPVAPEPCQPVVPEPCPPTVTPSPYQQKTK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 134
51 -10.200PF08065.12; W5PYU1_SHEEP/1137-1247; KI67R (NUC007) repeat  ali follow..  7....................CKSPQSEPVNTPSRRGHLRTPSQKVNVQEDLSALRKPQQTPGKTTLSPREAEGSDRSIAVSQEAPEEMLDLAGKVPSAKRRPRTPKGKAQPLEDLTGFKELFQT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 110
52 -9.970PF07376.11; M1CYC0_SOLTU/1-202; Prosystemin  ali follow..  10  99..................KLKVEYEEEEYEKEKIVEKGSPSQDINNKGDDPQEKPMVEHEEGDEKETPSQDIIKIEGEGAQEITKVVCEEREKIVVQVDLAVHSTPPSKRDPPKMQTDNNKL...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 202
53 -9.960PF12718.7; Q6C081_YARLI/7-149; Tropomyosin like  ali follow..  39...............ALTHKNSLLEEEVEKLEQQLSESKDAAEEGATHGAANEGLSKKLAILEEDLENSDRNLRETTEKLRQTDVKAEHFERKVTSLEQERDDWEKKHEELLEKYNAAKK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 143
54 -9.950PF05937.11; APC_HUMAN/2670-2843; EB-1 Binding Domain  ali follow..  56...........................FIQVDAPDQKGTEIKPGQNNPVPVSETNESSIVERTPFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKSSADSTSARPSQIPTPVNNNTK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 145
55 -9.890PF17669.1; CK091_BOVIN/8-193; Family of unknown function (DUF5529 topsan)  ali follow..  15  54..................................AAGGRSLPQGPSAPAPPPPPGLGPPSERPCPPPWPSGLASIPYEPLRFFYSPPSGPEAAASPLAPGPMTSRLASASHPEELCELEIRIKE-----LELLTITGDGFDSQRYKFLKALKDEKLQ-----------------LKTRQPGKKSASLS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 186
56 -9.830PF04589.13; F6Y5S3_MACMU/216-375; RFX1 transcription activation region  ali follow..  1......................................SSSKTAGAPTGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKAGPVQPLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQ........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 79
57 -9.770PF14962.6; H0WJV0_OTOGA/1-192; Mitochondria Localisation Sequence  ali follow..  46MIYYLLV-VSAGGYYTYKTVTSDQAKHTEHITNMKEKTKAELHPLQGEKEHIAEAEKASPEAPEVSVVEAEVVAAEEIPDATVAALTEASACPGGVEAAPETAASGAETAPEVPEAVVGD........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 167
58 -9.750PF04695.13; Q38CL4_TRYB2/25-173; Peroxisomal membrane anchor protein (Pex14p) conserved region  ali follow..  4........RVSNAVEFLLDSRVRRTPTSSKVHFLKSK-EEICEAFTKVGQPKTLNEIKRILSERPYVPTGPNSQHMTQPLRDESADSVPTPHPNQSRRHTSLLYAPQAPPLPEAAAATRGVDWRDLVIGAGAAVIGGFAAFKAPYE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 149
59 -9.740PF15327.6; E9QB91_DANRE/1356-1525; Tankyrase binding protein C terminal domain  ali follow..  58.....................RDSTEEKADSFKEAEESDSEEQAKGIETRTSSMSQPQRVALFPGMDPSALKAQLKKRGDSDNQTDGPSPSQLSRSPKSPFLPRAAPRVLPPAGGKENGEESSPQWLKEL.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 166
60 -9.670PF12273.8; K1X614_MARBU/45-169; Chitin synthesis regulation, resistance to Congo red  ali follow..  3VALILVVIFFLLMGYLFSITRRRRQRGLAPMYGTGWIPGTGPKPPQGQWADGRNGGPSHYVAPPPPYMGNQATGTTFNSNDGYYGGHANQAGGAGIELQQPQSSYQPQRGGDNVYTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 119
61 -9.550PF07181.11; B9K406_AGRVS/3-202; VirC2 protein  ali follow..  11  1.................MGIHKPALSVGEAKRLAAARPEIVQTVPTRFSQGAQPPRLPERGRPLDRPLPTAAKRRDNFDRQLVLTADALSSAAAPEKIQIFLSARPPAPEVSKIYDTLILQYSAS------SLQMILRRAL-FESMLEDGSFSTAPKVQTSRMFPVSLLELA-----RNHFDPLRLETARAFGHKLATAALASFFAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 194
62 -9.530PF07382.11; A0A0E9ASG6_CHLTH/1-221; Histone H1-like nucleoprotein HC2  ali follow..  10  1................MLGVQKKRSTRKTAARKTVVRKPAAKKTAAKKAPVRKVAAKKTVARKTVAKKTVAARKPVAKKATAKKAPVRKAVAKKTVARKTVAKKTVAARKPVAKKATAKK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 104
63 -9.490PF03535.13; H9G7Z6_ANOCA/44-248; Paxillin family  ali follow..  10  94.....................SELDRLLLELNAVQHNPPSSYPADEAARTPSLPSGAGSHYSALENATSLNTQPTAPAKEKPKRNGGHGIEEVCPSVESLLDELESSVPSPVPAITV........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 189
64 -9.490PF09595.10; VGLG_HMPVC/35-217; Metaviral_G glycoprotein  ali follow..  1................LIGITTLSIALNIYLIINYTIQKTSSESEHHTSSPPTESNKEASTISTDNPDINPNSQHPTQQSTENPTLNPAASVSPSETEPASTPDTTNRLSSVDRSTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 101
65 -9.470PF00997.18; E2QXF8_CANLF/23-184; Kappa casein  ali follow..  78............................QVLPNAYPPTMMHRPQLHPSFIAIPPKKIQDKTSIPTINTIATAEATPIPLTEPKVNTAVTSDASSEFTITSTPETTTVPVTSP................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 161
66 -9.380PF15310.6; F1PR57_CANLF/106-353; Vitamin A-deficiency (VAD) rat model signalling  ali follow..  14.................VQTSKHLFWADKLIQASEHSLERMTDTQLGKNKGKTISHLGQQSVPKDTTCSKKQLQTPSAQPAPPATDSQQLPNPYPSSSSLSPAIGLEELVNFASSLAVAS........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 116
67 -9.380PF12037.8; ATAD3_XENTR/27-282; Domain of unknown function (DUF3523 topsan)  ali follow..  13  106................LARQRYEDQLRQQQLQNEENLRRQEESVQKQEAMRKATVEHEMELRHKNEMLRIEAEARARAKVERENADIIRENIRLKAAEHRQTVLESIKTAGTVFGEGFRAFISDKVTATVAGLSLLAVGIYTAKNAIEARLGKPSVR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 256
68 -9.370PF06959.11; F1PAG8_CANLF/622-825; RecQ helicase protein-like 5 (RecQ5)  ali follow..  28....................PKRVGAGFPRGSCPFQTATELMEKTQAEERAPQPVQEGKREPPSQPCGLQDEDCSKALPGPRAEAPGSSFHCGGSSPEKTGKSPSKGGPLAKARASKKQQLLAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 131
69 -9.340PF06121.14; I3N7Y4_ICTTR/15-202; Domain of Unknown Function (DUF959 topsan)  ali follow..  12  1...........LLTCCLVPSWADLLTLDWLWSTDLADSRDTLVSQPQGSLPVQPAAAPATHVAPQDDPAEQRTAPASPRPPLENPKAAPSRAPGAPISAAASAAPAASPDTREENVA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 106
70 -9.340PF06390.12; GNAS3_MOUSE/1-257; Neuroendocrine-specific golgi protein P55 (NESP55)  ali follow..  158..................RGATFNQSLTQRLHALKLQSADASPRRAQPTTQEPESASEGEEPQRGPLDQDPRDPEEEPEERKEENRQPRRCKTRRPARRRDQSPESPPRKGPIPIRR........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 256
71 -9.310PF12301.8; G3N6P2_GASAC/29-223; CD99 antigen like protein 2  ali follow..  2................................DLADALDEVNPTTPTPKPAAPGGGKGGATKAPSKVTPKAPVTTPVKPKPKPAAADDFDLSDALDSNNDIGIKDKNKGQGDKIKTDNDPTFQSR-----------------LFDVSKDETYHPDKGKGGR--------SGSKDQLDQYDENSDTTAEVGTIAGIASAVAMALV--GAVSSYISYQ--KKKLCFGLQQSLNA-----MVKTENPEAVVA------EP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 195
72 -9.300PF11081.8; SF33K_ADE02/1-225; Protein of unknown function (DUF2890 topsan)  ali follow..  68...........................QKLATVPSIATTSAPQAPPALPVRRPNRRWDTTGTRAAPTAPAAAAAAATAAVTQKQRRPDSKTLTKPKKSTAAAAAGGGALRLAPNEPVSTRELRNR--------------IFPTLYAIFQQSRGQEQELK---------------IKNRSLRSLTRSCLYHKSEDQLRAEALFSKYCAL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 224
73 -9.260PF15996.5; F7DXT1_XENTR/228-394; Arginine/serine-rich protein PNISR  ali follow..  2................IDAVKRRT--IREGLEKMEREKQKKLERERMEQQRSQMKKERNNHDYTEEEDGPHLPQKSKFDSDEEEDDDENAEDPVSAKGSRSPSPAPEENNELEITEEERAF----------------QMMVLTKMLL--------TEILLDVTNEEIYNVAKETHRKATKAPARQLAQSSALASLTGLGGLGG-Y................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 167
74 -9.210PF02063.17; W5NK27_LEPOC/2-285; MARCKS family  ali follow..  12  186....................DEAAAAVEEAKEEASPSQEAKSEEAAPEQAAAEEPKAAPAAEEPKAKEESVAEEKPAEPAAAETKAAPAAEQEAPKAEEPASATQEPAPASSPEAPAAE......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 284
75 -9.200PF03157.13; M8A4Z7_TRIUA/1-833; High molecular weight glutenin subunit  ali follow..  1MTKLVLFAAVVVALVALTASEGEASG-EHSLKTCRQVVDQQLRDVSPECQPVVVGPVARQYEQQVVVPPKGGSFYPGETTPPQQLQQSILWGIPALLRRYYLNVTSPQQVSYYPGQA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 126

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.