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Query: [S] KOG2690 Uncharacterized conserved protein, contains BSD domain, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNFFKSVFTEDLDPPETESESDSPKHSEEHEHPEQEHPEQSESNDDGGWSFGGLMKTLATRSESVIETYRRDLEEFGTGLKKEIEVAQGSLGTVGHAIDELGNTVLKGTAEIIAQGKEAILAAGNESDSSDNNSSQSFGRRDSFSSKPYSRFDAQIRAVQGDLNTYCEEPEDSDDYKKWESAFSLDGKAEEMEKLLEENGDMKGVYKRVVPSMVDHETFWFRYFYRVNKLKQAEDLRANLVKRAISLDDEEELSWDIDDEEESSEKVVEATKDVSRLKLEGNDGMGGGDVSETVKDEVESTYSVAKVSTQDEVTSADSVTEVSNVGLKTDKDSEEKKETDSEEVPEEKSFVDAAPPASDEAPIQDSVKPTSDEAPIQDSVKPKSDEAAPSQDSAKPDVAASSSTQQPSEEDLGWDEIEDMSSIDGKETSRSGGSPNRAELRKRLSAAEEDEDLSWDIDEDDEEESSSSKALast
1 -29.200PF03909.17; D8UJA4_VOLCA/186-243; BSD domain  ali follow..  39  1..................................................................................................................................................................................WKAGFSLEGVKADITRILSDNAFMAELQSRLVPIIVEYDDFWNRYFYRLHKLQQKEEQ.......................................................................................................................................................................................................................................... 58
2 -10.100PF15717.5; I3JV64_ORENI/1482-2091; Pericentriolar material 1 C terminus  ali follow..  10  371......................................................................................................................................................................................................................................QEGASASQELYLQTQMKNSRSSEASEAEEDNEDEEGGREVPLSISLSKAETQALTNYGSGEDENEEEEIEEFEAGPVDVQTSLQASADGQAEQESTAAGTAASEAEEIRTEQRSSENDDEIVRSVETVDSGVEEHERVECQSPEEESKAGASAVASERESTMYQGQDVTKEAPTTSSPDTDSPVMISVDEVGSGNTSQKSDEDDFVKVDDLPLQLTVMCEEELQKRIVEEQQNNNLSVE. 609
3 -9.630PF05793.12; T2FA_XENLA/2-524; Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)  ali follow..  9  135...............................................................................................................................................................................................................EAFP--------WYNF-HRTLTAEEAEQEWERRNKVLNHFTIMQQRRLKDQVGDEDEDEEGGGKLEKGGKGKKKKKKSDLKIHDLEDDLELSSTESENSDEEGESRKKPQKKVPAKGGKKKKRKSDDEALEDSDDGDFEGQEVDYMSDESSSDEELPGKIKPAKEEEGPKGLDEQSESSEESEEEKAEEEEGEEEKKAPTPQDNKKKKKGDSSDESETSEDSDIDGASSSLFMQKKKTPPKKDKKGGSNSSSRGNSRPGTPSP 396
4 -9.410PF04931.13; K2SXE2_MACPH/89-879; DNA polymerase phi  ali follow..  13  629..............................................................................................................................................................................................................................................................................................................................................................SKKESMSGQQDLFDQQGSEDGEDASEDDEDEQDSDVEMVEADGSDVEEVEEASDVDEEEEEDEDEEGGEDGSDADDEELEKFNAALAKTLNTSMLTGEGEDSDDDDEADDDDQMMALEPH 749
5 -7.800PF10754.9; B4EVZ4_PROMH/16-152; Protein of unknown function (DUF2569 topsan)  ali follow..  8  18..............................................................................................................SIVGLGLMSVLYLIRYFSDFSIIHQLPFHVVSSWYLSVLTTWAMFAFTAYLLRQFFYRAKNFPRLFIIWLLINLLLAIKSFGFAPVDDQTAVKSLLWAVMATVC-----FVPYIKYAKRVRET............................................................................................................................................................................................................................................. 135
6 -7.760PF17080.5; B9E9V9_MACCJ/10-153; Multidrug Resistance efflux pump  ali follow..  16  29.......................................................................................................................................................LSRLLIYFHLAEFTYNESVMDNSFY-GYVLLFIIEYIMDELKRILPENKFFHGWYFHIISVSISTIVFY-NFFVVLAIISALYYLTELFYPDSVDLNNK............................................................................................................................................................................................................................ 144
7 -7.420PF11200.8; A7AQJ9_BABBO/2-370; Protein of unknown function (DUF2981 topsan)  ali follow..  9  26......................................................................................................................................................................................................HPSLTQL-TNAISAVLGFMGALKRYLY-VHLLPRGPQLKDVSDFASIRSAALPSTALMRSNAFLRQRELPYAFDQNDSLELGDSFPALVSDDNKTLEDSISTASTDAEDNIPSKNLRMPQTEEMPINQHVGNDLNMPGNGAMPISGNIDAVTGNLEPASKAIQQTTPNVNESMKIPNEMPMPYGNSKEAKSAELPIAIPEQTVAKNTYDAKTETFYDRLPLVPHIGETEGEAEEVSKDELPPETHDLTPEGVSEVVAIYKIQKRPLKMAAAG 327
8 -7.360PF06524.12; B7QNY2_IXOSC/1-301; NOA36 protein  ali follow..  18  242.......................................................................................................................................................................................................................................................................................................................................................................................................................SGRDDDEDDGYDYGGAGYYGSGGGGGDLDDEDEDDDEDDDDDDDDEDEESDEDESSDEKE... 301
9 -6.800PF05029.13; TOF1_EMENI/643-1167; Timeless protein C terminal region  ali follow..  7  282......................................................................................................................................................................................................................................PANPRSKAHALNELKQKRKKRKDKGEEEPVDEETLEERRQARLENTRWRLAKIKSDLYVHASDEESDAEADQEFFRLEEERRNEQSERIKKALLLGRTEDAGNKARQRKRGKRSNEPNIAGEEETSGKRRRHSGGTNVELEEDDILMDDMEMPSRASSGEYSSNDADAIDKSMAAAEDELYFDDDLAFGRDRDKDETSVDRDGADASSPRKHNDGSESAEEDIP--VESDSE........ 525
10 -6.770PF11667.8; Q5JH59_THEKO/55-158; Putative zincin peptidase  ali follow..  14  22...................................................................................................................................................................................DVGFGISAKYGMVTPYISFRTPLTVRYVIVAPILISRSPFWA-YIFNTAGMAGDFLILLVLSKMPSEA............................................................................................................................................................................................................................... 103
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.