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Query: [S] KOG2812 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAPVSGSRSPDREASGSGGRRRSSSKSPKPSKSARSPRGRRSRSHSCSRSGDRNGLAHQLGGLSQGSRNQSYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPSLLDKEREESLRQKRLSERERIGELGAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTKAEEPSDLIGPEAPKTLTSQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECSGYVMSGSRHRRMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRKTKGKDDKLast
1 -32.500PF06047.11; T1L197_TETUR/142-243; NF-kappa-B-activating protein C-terminal domain  ali follow..  79  1.................................................................................................................................................................................................................................................................................................................AKDYGRALLPGEGAAMAQYVAEGKRIPRRGEIGLTSEQIESFENVGYVMSGSRHRRMEAVRLRKENQIYSADEKRALAMFNREERQKRESKILSQFKEMIKS........ 102
2 -10.200PF06495.11; Q9NIJ7_DROAE/1-186; Fruit fly transformer protein  ali follow..  8  2..............................................................................................................................................................DADSSSRSPRDTRRRPRQREKMPYFADELRERDRVRNLRKLKTTQKRTPTPPPRERRSRQARSRSRSRTHSAEQSRCQRRRSRSYVRQRSGSRHQTSSSCSRRRHSRSRSRSRT............................................................................................................................................... 115
3 -8.400PF15376.6; F1QJT2_DANRE/24-1319; Domain of unknown function (DUF4603 topsan)  ali follow..  8  123.KQKEKEKHGIKKSDISQSPEPDESLSSKDQVEMYYEAFPPLSEKPVCLQEIMTVWNTAKACTYSSSSSSAVPQTSTDTSSPKDCTSEGEAFKDRTVDAPSSTSTTSEKAQQRRTKREKENRFHGSATGMPDDQVAPHSKRQARHRSEGRFRPRSWSSGSSEAGSSSSGNQGDQAPSCKSVRIRHKSREVSGRNKKGRSGGGQVKLALKVIDKEERKNARGNMSTTGGPPKQQQHYMKKGKRPLREIRKDANLVEAQESGGEASKKEYMEE................................................................................................................................................ 392
4 -7.450PF03064.16; U79_HHV6Z/6-234; HSV U79 / HCMV P34  ali follow..  16  127...........................................................................................................................................................SEPELRNLGDLKFMEKFEKECRALDRKKHDDEHRKRSGKQKEKRKVEDIDKKKEDEKRKQEEKKRNDEDKRPDKKDEFDEPPKEKRQKSHHETKRNLEEQSHE............................................................................................................................................................. 229
5 -6.650PF13779.6; D7A9C0_STAND/55-942; Domain of unknown function (DUF4175 topsan)  ali follow..  7  524..........................................................EDGDLSDVEKKLRDAQQALQNALENNASDDEIKRLTQELREAMQEFMQALAEEAQRNAQADSDQPMGPNTRMVRPQDLQKMLDRIEDMARNGARDAARQMLSELQNMLNGLQAGRQQQRRQGQNQMSQAMDQLGDMIRRQQQLRDRTFKQGREQGQQGEQGQQGQQDQRFGDLKQSQEQLREQLRQLREKMQQAMRGRQQGQGEQGQQGQGEQQGQNGQGQQGQQGEGQQGQGMPGEGGLGEAEQAMREAEQALGQGDGTGAVDAQSEALQALRKGAQQMAEAMQQQPGQGQGQEPGGPSGETAERNDPLGRPMRSRDYGDDVTVKVPDEIDMQRARRVLEELRRRFGEPERPRLEL 880
6 -6.290PF15292.6; TICRR_HUMAN/208-1004; Treslin N-terminus  ali follow..  10  602.......................................................................................FSDDSMTQENKSPLLSVPFLSSARRSVSGSPESDELQELRTRSAKKRRKNALIRHKSIAEVSQNLRQIEIPKVSKRATKKENSHPAPQQPSQPVKDTVQEVTKVRRNLFNQELLSPSKRSLKRGLPRSHSVSAVDGLEDKLDNFKKNKGYHKLLTKSVAETPVHKQISKRLLHRQIKGRSSDPGPDIGVVEESPEK.................................................................................................................................... 797
7 -6.160PF03276.14; GAG_SFVCP/9-622; Spumavirus gag protein  ali follow..  5  474.......................................................................................................................RASVTPQPRPSRGRGRGQSAPEPSQGPVNSGRGRQCPAPGQNDRGSNIQNQGQENSSQGGYNLRSRTYQPQRYGGGRGRRWNENTNNSETRPTEQSPQTPRPIQAGSGVRGNQSQTYKPAAGRGGRGNQNRNQRSSGAGDS........................................................................................................................................................... 614
8 -5.980PF15620.6; L8YCT1_TUPCH/224-477; Centromere assembly component CENP-C middle DNMT3B-binding region  ali follow..  9  69...........................................................................................................................................................SHGAHPVEKSQPSDQENLCTNCALTDEMENSCRSTKYKMCSENAEKSPGNKRTVKQKQRTKSKDSIDKDQLDVGQSKDGNMSHIAQKKLQRNSDRNTEECEEKRNNRISKKQMPSMGSKNSTKKDKEESKKKR............................................................................................................................... 201
9 -5.930PF17069.5; RSRP1_RAT/1-300; Arginine/Serine-Rich protein 1  ali follow..  11  3...........................................................................SAAVSKYVNDMWPGSPQEKASPSTSGSGRSSRLSSRSRSRSSSRSSRPHSRSSSRSSSRSHSRPRRSRRSRSRSRSRRRHQRKYRRYSRSYSRSRSRSRGHRYYRDSRYEQPRRYYQSPSPYRSRSRSRSRGRSHHRRSYYAITRGRRYYGFGRTVYPEDRPRWRERSRTRSRSRSRT.................................................................................................................................................................. 180
10 -5.840PF11725.8; Q887C9_PSESM/17-1794; AvrE-family Type-III effector proteins (T3Es)  ali follow..  7  3........................................................................................................................................................TPDARAATDLQERAEQPRQRSSHSLSSVGKRALKSVGKLFQKSKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSSPQNTHSAPKSILRNHPNQASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLDSDNPMTDEEAVANATRQFRSPDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIPPREPMLWRSNGGRFELKDEKLVRNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILATPKQT 265
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.