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Query: [S] COG2149 Predicted membrane protein, from COG1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKISRLGEAPDYRFSLANERTFLAWIRTSLGFLAAGVGLDQLAPDFATPVIRELLALLLCLFAGGLAIYGYLRWLRNEKAMRLKEDLPYTHSLLIISVILMIVAVIVMGLVLYAGLast
1 -8.650d1wjoa1 a.40.1.1 (A:8-118) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  1.................NDDIIVNWVNRTLSEAGKSTSIQSFK........................................................................ 26
2 -7.250d3cu7a6 b.1.29.7 (A:565-606,A:770-822) Complement C5 MG6 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  55........PRRKQLQFALPDSLTTWEIQGIGISNTGICVAD.......................................................................... 87
3 -7.190d1aoaa2 a.40.1.1 (A:260-375) Fimbrin (Plastin), actin-crosslinking domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  19  8...............LSPEELLLRWANFHLE-IKDSKAYFHLLNQIAPKGQ................................................................ 55
4 -6.300d2owna2 d.38.1.8 (A:150-258) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}  ali model 3D-neighbors follow..  11  14KPYHVRFFDIDPNRHV-NNAHYFDWLVDTLPAVKYGQTVTAHANILPSEVADQVTTSHLIEVDDEKCCEVTIQWRTLPE.................................... 109
5 -6.240d3jbre_ f.63.1.1 (E:) L-type calcium channel Gamma-1 subunit {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}  ali model 3D-neighbors follow..  13  105...................ISAAAISVFSLGFLIMGTICALMAFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIDSEDTVWIEYYYS-----SFACACAAFVLLFLGG 196
6 -6.060d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  14  18.......KLPFYRFYMLREGTPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAAKDEKMGPEPIIKSLWAVTVVATIVILFVAL... 128
7 -5.950d1z0pa1 a.2.18.1 (A:1-77) Hypothetical protein SPy1572 {Streptococcus pyogenes [TaxId: 1314]}  ali model 3D-neighbors follow..  13  1...............MSYEKEFLDWVKTQIQVNQLAMATSQEVAQEDGDERAKDAFIRY........................................................ 48
8 -5.750d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  1......SKSKMIVRTKFIDR-ACHWTVVIFLVALSGISFF-LTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTG 130
9 -5.570d6eida_ f.13.1.0 (A:) automated matches {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}  ali model 3D-neighbors follow..  20  88...................R-YAEWLLTC-------VILIHLSNLTGLSNDYSRRTMGLLVSDIGTIVWGA............................................ 132
10 -5.560g2a73.1 b.1.29.7 (A:535-577,B:746-806) Complement C3 MG6 {Human (Homo sapiens) [TaxId: 9606]}  ali 3D-neighbors follow..  55LKEPPKNGISTKLMNIFLKDSITTWEILAVSMSKKGICVAD.......................................................................... 96

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.