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Query: [G] KOG1581 UDP-galactose transporter related protein, from COG1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAEPELVNGGVKENKLWKGVFAVSGIMSTLVIYGVLQEKIMRVPYGVNKEFFKHSLFLVFCNRLTTSAVSAGALLASKKVLDPVAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKKYKGFDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVATASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAKNLLNNKKNSQTQPPPPELPQYEKVESSLast
1 -7.000d1whxa1 d.58.7.1 (A:219-316) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  14  6.........................................................................................................................................................................................................................................................ILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGIT-----AIVEFLEPLEARKAFRHLSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQPAEKA 97
2 -5.170d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  13  1...............................................................................................................................................................................................................................................................................................IDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEE............ 45
3 -4.730d3lqva_ d.58.7.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  5  3...................................................................................................................................................................................................................................................PEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPET----TAYVVYEDIFDAKNAVDHLFNVSNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKE 103
4 -4.640d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  9  20...................................................................................................................................................................................VVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRFAQYFPMQVVRYSLLIHAAAGIILIHAILIH-MAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI 216
5 -4.080d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  12  11.......................................................................................................TNGRLMANPEALKILSAITQPMVVVIVGLYRTGKSYLMNKLATVQSHTKGILVLLDTEGLGDVEKGDNQNDSWIFALAVLLSSTFVYNSIGTINQQAMDQ............................................................................................................................................. 135
6 -4.080d1pw4a1 f.38.1.1 (A:5-448) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  7  239...............................................................................................................QIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYL---------------KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT--GVFFMTLVTIATIVYWMNPAGNPTVDMICM-----IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWMIGGSILAVILLIVVMIGEKRRHEQLLQE........... 444
7 -3.860d3jbre_ f.63.1.1 (E:) L-type calcium channel Gamma-1 subunit {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}  ali model 3D-neighbors follow..  7  5.......................................................................................................................EAPKVRVTLFCILV------------GIVLAMTAVVSDHWAVLSPHMENHNTTCEAAHFGLWRICTKRIALGYFRHFNPGESSEIFEFTTQKEYSISAAAISVFSLGFLIMGTICALMAFRKKRDYLLMFYVFAGLCLFVSLEVMRQSVKYYSSFACACAAFVLLFLGGISLLLFS................................................. 203
8 -3.800d5c6na_ f.61.1.1 (A:) DinF {Bacillus halodurans [TaxId: 272558]}  ali model 3D-neighbors follow..  7  16..........................................................................................................LLRSLSIPAMFVMALYNVVNTIFISYAVVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGNILTVLVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGASIATVIAQASVTGLVLRYF................................................. 215
9 -3.770d2mzsa1 d.58.7.0 (A:262-358) automated matches {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 559292]}  ali model 3D-neighbors follow..  7  2.........................................................................................................................................................................................................................................................VIVKNLPASVNWQALKDIFKECGNVAHADVELDGDGVSTGSGTVSFYDIKDLHRAIEKYYSIEGNVLDVKSKESVHNHSDGDDVDIPMDDSPVN. 97
10 -3.740d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}  ali model 3D-neighbors follow..  12  15.......................................................................................................................................NKKASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPV-----LKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAK................................................................................................................................ 91
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.