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Query: [I] KOG1683 Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase, from COG1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLSRVVHRSSSVFRTNLSFRLFSQSAFAVHSTHRVEKQGDVAVMKIDLPNTTENVLNKALFAEMNETLDRLQSDQSVKAIVVMSGKPNSFVAGADIQMFKAEKTAAGVSNLLREGQKQLLTIELSQKPIVAAIMGSCMGGGLEIALACHYRIAVNDKKTLLGLPEVTLGIMPGDGGTQRLPKLTTVQNVLDLTLTGKRIKANKAMKIGIVDRVIQPLGDGICTSTETTHKYLEEIAVQSARELANGKLKINRDKGFVHNATQAVMTSKFVLDNVILKMAKNKLIKLTNGNYPAPLKILDVVRTAYLDPKNGYEAEAKAFGELSQTFQSKALFGLFEGSTNAKKNKYGKGLPVNEIAVVGAGFMGAGIANVTINKGIRTVLLDANQAGVERGQNHVATHLNRQLKRQKISKLEREKIYNHLVPTIDYSAMKNADVVIEAVFEDLPLKHKVIRQIENVVGPNTIIASNTSALPIKDIAAASSRSDKVIGMHYFSPVEKMQLLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLSPMMSEIVRLLQEGVEPSELDKLTTKFGFPVGAATLADEAGLDVAEHVARYLGTALGPRVHGGSVDLLSELVRAGHKGRKTSKGIFVYGDGAKGSKKVNQEAAKLFEKYKLTPIKSVSSPEDRQLRLVSRFVNEALLCLEEGVISSPSDGDIASVFGLGFPPFWGGPFRFVDLYGAGKLVAAMDRFAGVYESVQFEPCQLLRNHAKSGGQFYSLast
1 -70.600d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}  ali model 3D-neighbors follow..  36  1............................................................................................................................................................................................................................................................................................................................................................AKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCP............................................................................................................................................................................................................................. 186
2 -67.100d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}  ali model 3D-neighbors follow..  30  12...................................ALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGK-DVFIVGADITEFVENFKLPELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADS--AKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDALKVSAVDAVVTADKLG-------------AAALDLIKRAISGELDYKAK----RQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD...................................................................................................................................................................................................................................................................................................................................................................................................................... 308
3 -64.800d4j0ea1 c.2.1.0 (A:1-198) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}  ali model 3D-neighbors follow..  32  3.......................................................................................................................................................................................................................................................................................................................................................TAKCAMQNIRNVAIVGSGQMGSGIAQVTASSGFNVMLADVNKKALDRAMKAISQSVTHLSKKQKGTDKEKSDTMSRIKTCNNVSTVADADLIIEAAIENIDLKRGIFAQIEQSCKKDSILTTNTSSFLLEDVAKGLQDKTRFGGLHFFNPVPVMKLLEVIRSDDTSDETYATLIKFGTAVGKTTVACKDSP............................................................................................................................................................................................................................. 198
4 -64.400d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  32  3..............................................................................................................................................................................................................................................................................................................................................................IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKKAGDEFVEKTLSTIATSTDAASVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTP............................................................................................................................................................................................................................. 192
5 -60.000d4e12a1 c.2.1.0 (A:1-189) automated matches {Acinetobacter baylyi [TaxId: 202950]}  ali model 3D-neighbors follow..  23  2.............................................................................................................................................................................................................................................................................................................................................................TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEAGAADGAAQKALGGIRYSDDLAQVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELK................................................................................................................................................................................................................................ 185
6 -52.000d3peaa_ c.14.1.0 (A:) automated matches {Bacillus anthracis [TaxId: 261594]}  ali model 3D-neighbors follow..  28  1............................MLKFLSVRVEDHIAVATLNHA--PANAMSSQVMHDVTELIDQVEKDDNIRVVVIH-GEGRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATES--AKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMMLTSTPITGAEALKWGLVNGVFAEETFL-------------DDTLKVAKQIAGKSPATARAVLEL------------------------------------------LQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRK............................................................................................................................................................................................................................................................................................................................................................................................................................... 252
7 -51.900d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}  ali model 3D-neighbors follow..  24  4..............................VLVEPDAGAGVAVMKFKNP--PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG-RSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQMAIPDHARQLTKAMMRKAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 219
8 -51.200d2ppya_ c.14.1.0 (A:) automated matches {Geobacillus kaustophilus [TaxId: 235909]}  ali model 3D-neighbors follow..  27  1.......................TAVETKKQYLTVFKEDGIAEIHLHIN--KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSA-DPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDE-AGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMNITGETITPQEALEIGLVNRVFPQAETR-------------ERTREYARKLANSATYAVSNIKL------------------------------------------AIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQ............................................................................................................................................................................................................................................................................................................................................................................................................................... 258
9 -50.700d5jbxa_ c.14.1.0 (A:) automated matches {Myxococcus xanthus [TaxId: 246197]}  ali model 3D-neighbors follow..  29  2..............................PEFKVDARGPIEIWTIDGE-SRRNAISRAMLKELGELVTRVSSSRDVRAVVITGAGDKAFCAGADLKERATM-AEDEVRAFLDGLRRTFRAIEKSDCVFIAAINGAALGGGTELALACDLRVAAPA--AELGLTEVKLGIIPGGGGTQRLARLVGPGRAKDLILTARRINAAEAFSVGLANRLAPEGHLLAVAYGLAESVENAPIAVATAKHAID--------------------------------------------------------EGTGLELDDALALELRKYEEILKTEDRLEGLRAFAEKRA............................................................................................................................................................................................................................................................................................................................................................................................................................... 252
10 -49.500d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}  ali model 3D-neighbors follow..  21  2................................VFEENSDEVRVITLDHPNK-HNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMAST--ANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVASYPASAFINTKRAVNKP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 213
11 -49.500d3h0ua1 c.14.1.0 (A:8-283) automated matches {Streptomyces avermitilis [TaxId: 33903]}  ali model 3D-neighbors follow..  18  1..........................TASYETIKARLDGTVLSATFNAP--PMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRE-NAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAERYGWVNRAVPDAE-------------LDEFVAGIAARMSGFPRD-------------------------------------------ALIAAKSAINAISLPAPAEVRADAALFQQLVRGEKVQQRTAELF-KQGFQTRGATELDLGDALGHLKA........................................................................................................................................................................................................................................................................................................................................................................................................... 276
12 -49.400d4qfea1 c.14.1.0 (A:2-229) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  27  1.............................SEPVRIERNGPVTTVIIDRP-EARNAVNGPTAAALFAAFEEFDADDTASVAVLT-GANGTFCAGADLKAFGTPEANQVHRE---GPGPMGPSRMDLSKPVIAAISGYAVAGGLELALWCDLRVVDED--ATMGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTGRAVDAAEAYAIGLANRVVPTGQARQAAEELAADARLPQQCMRADRLSALHQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 212
13 -49.100d3pe8a_ c.14.1.0 (A:) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  23  1.............................SPVLLVDTTDRVRTLTLNRPQS-RNALSAELRSTFFRALSDAQNDDDVDVVIVT-GADPVFCAGLDLKELGD----------TTELPDISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASEN--AKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASVGNNQKAVRALLDSYHRI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 205
14 -48.600d4jyla1 c.14.1.0 (A:1-243) automated matches {Thermoplasma volcanium [TaxId: 273116]}  ali model 3D-neighbors follow..  26  3................................VEIERRGDASLIVLSRP-EKLNAINLEMLADLADQFSKAEKED---RVIVITGYGKNFSAGADINMLASF-DPASAYSFRLKMNSIAQRIRKSDKPVIALLKGYSMGGGLELAESADIRIAMSD--AVIGQPESSIGINAGAGGNVILPKLVGRGSAAYLAMSGKKLNAQEAMALGLVDEVVDDEAKAWKIIDDICKKP--KKTLQFIKRAIN--------------------------------------------------------SSYDMGLESAMDQEALYFSLLFTDPEVLDALSKWR................................................................................................................................................................................................................................................................................................................................................................................................................................... 242
15 -48.500d5c9ga1 c.14.1.0 (A:2-260) automated matches {Hyphomonas neptunium [TaxId: 228405]}  ali model 3D-neighbors follow..  23  1.............................TLPIRLDIAAPLAEIVLNKPER-RNALSVDMWAAIPGLVAEANANPDVKLILIHGGDAGAFAAGADISEFETIYATEDAKASGQRIAQALDAIENSEKPVIAAIEGACVGGGVSLAMAADLRVAGEG--AKFGVTPGKLGLVYPAGDTRRLLAAVGPGATKDILFTGRIFTAGEAKSLGLIDRLVEKGTAL-------------EAARVWAGEIAAISQ--------------------------------------------SVRATKRMIRGLQTGWTDETPEAQSLFLNGFANEDFKEGYRAFLDKRP............................................................................................................................................................................................................................................................................................................................................................................................................................... 253
16 -48.500d3moya_ c.14.1.0 (A:) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  28  10...................................RPVAGVGLIRLDRP-DALNALNQTLEAEVLDAARDFDADLEIGAIVVT-GSERAFAAGADIAEMVTLTPHQ---ARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADT--ARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRARMSRPAGRAVKDAIN--------------------------------------------------------EAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRT............................................................................................................................................................................................................................................................................................................................................................................................................................... 252
17 -48.400d2j5ia_ c.14.1.0 (A:) automated matches {Pseudomonas fluorescens [TaxId: 294]}  ali model 3D-neighbors follow..  21  1........................TYEGRWKTVKVEIEDGIAFVILNRP-EKRNAMSPTLNREMIDVLETLEQDPAAGVLVLT-GAGEAWTAGMDLKEYFREVDAGQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE--ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLEKNPVVLRAAKHGFKRCRE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 226
18 -48.400d4izba_ c.14.1.0 (A:) automated matches {Ruegeria pomeroyi [TaxId: 246200]}  ali model 3D-neighbors follow..  22  13...................................LRDNGVCVVTLNRPDK-RNALDVATIEELVTFFSTAH-RKGVRAVVLT-GAGDHFCAGLDLVEHWKADSADDFMHVCLRWHEAFNKMEYGGVPIIAALRGAVVGGGLELASAAHLRVMDQS--TYFALPEGQRGIFTGGGATIRVSDMIGKYRMIDMILTGRVYQGQEAADLGLAQYITEGSSFDKAMELADKIASNLPLTNFAICSAISHM............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 220
19 -48.300d4jwva1 c.14.1.0 (A:3-257) automated matches {Novosphingobium aromaticivorans [TaxId: 279238]}  ali model 3D-neighbors follow..  21  1..............................ADIDFRIEGHVAHVRLNRP-QGLNAITQEMDDLLLDAWTEVNANSDIWAVVLSAEGEKAFCIGADVSGGAERKTRMALGG---GLTGIGGPLVTCKKPMVAAVQGFCVGGGFELAMCADIIVAADT--AQFGLPETKVGIIGECGVVHRAMRQLPYHIALQLILTGERIKADEARHYGLVNEVVPFAELE-------------EAALRWASKLNAASPLAVQAAKAA------------------------------------------ALGRLGHPLEVALMTRFEPIEEYAATEDKKEGERAAGERRK............................................................................................................................................................................................................................................................................................................................................................................................................................... 249
20 -48.100d4kd6a_ c.14.1.0 (A:) automated matches {Burkholderia graminis [TaxId: 396598]}  ali model 3D-neighbors follow..  20  2................................VLFSNHGRVAVITLNRPER-LNAWTTPMRETIIDALERFNRDPEVAAIIMTGAGNRAFSAGQDLSEAHDF-DGERAVAWVKEWQRYYTALRSLSKPLVMALNGTAAGSAFQVALLGDIRVGHPG--VRMGQPEINAGI-ASTTGPWIMNAMLGMSRTIELTLTGRLMEAEECHRIGLIHHLVDEDKVFDKALEIATEAAKPPVAMRLDKQRFREMTE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 214
21 -47.900d3swxa_ c.14.1.0 (A:) automated matches {Mycobacterium abscessus [TaxId: 36809]}  ali model 3D-neighbors follow..  22  3..............................ETLRIRRDGYVLVIGLNRPAK-RNAFDKTMLEELALALGEYETDTDLRAAVLY-GEGPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADET--ATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHV-------------DTAIAIAQTIARQAP------------------------------------------LGVQATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAE............................................................................................................................................................................................................................................................................................................................................................................................................................. 255
22 -47.700d4wcza_ c.14.1.0 (A:) automated matches {Novosphingobium aromaticivorans [TaxId: 279238]}  ali model 3D-neighbors follow..  28  2...............................SLRLERDGAVARLLIDRADR-RNAFSLDMWQRLPELLAEASGDDALRVLVVKSANGGAFCAGADIAELLANKDDAAHAANQQAINRAQYELARFRLPTVAMVEGDCIGGGCGIALACDMRIAAPA--ARFGITPAKLGLVYPLHDVKLLVDLVGPGQARRLMFTGGLIDANEAHRIGLVELLGESEDALVGQLA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 193
23 -47.700d4k2na1 c.14.1.0 (A:1-259) automated matches {Magnetospirillum magneticum [TaxId: 342108]}  ali model 3D-neighbors follow..  20  1............................MSDVIQLVREGAIATVTLNRPDR-MNALNLPMWRGLAEAFETISADRSIHVVILRGAGTKAFAPGADIEEFDTLRNAEQAKAYDLVMRKALDTVRACPQPVIAAIWGPCVGGGLELACCCDIRLSAKS--GKFGVPINKISVVMAYPELAQIRRVAGPAAALEILLEGRIMDADEAAAKRLVNRVVEDDAMDAEVAATAKRAAGAPLANRWHKAFIAR............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 217
24 -47.200d4moua_ c.14.1.0 (A:) automated matches {Arthrobacter aurescens [TaxId: 290340]}  ali model 3D-neighbors follow..  25  1.........................ARPRTGRISVAIADGVASVEISNL-AQRNALTKDMCLEIQELMPQLDADPDVAVVVLR-GAGDTFCAGASISELASVLDPQPDGSTADHLSRADSAIAALSKPAVALVDGACMGGGWQIASACDFIIANER--AVIGLTPAKIGIIYPRPGLERLVRLVGHANAKYILLTGQTFSAPEARALGLVADVVPSESFEEKCAALVRSRSRSRFSMHSMKRLVD.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 218
25 -46.800d3qxza1 c.14.1.0 (A:3-260) automated matches {Mycobacterium abscessus [TaxId: 561007]}  ali model 3D-neighbors follow..  21  1..............................TELHEEIRDGVAVLTLHGPST-RNSFTVELGRQLGAAYQRLDDDPAVRVIVLT-GAPPAFCSGAQISAAAETFAAPR--NPDFSASPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEE--GRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKVL-------------GAALRMAHDIATNVAPES---------------------------------------AALTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRP............................................................................................................................................................................................................................................................................................................................................................................................................................... 252
26 -46.800d4f47a_ c.14.1.0 (A:) automated matches {Mycobacterium marinum [TaxId: 216594]}  ali model 3D-neighbors follow..  20  2..............................PDALVEQRGHTLIVTMNRPSR-RNALSGEMMQIMVEAWDRVDNDPDIRCCILT-GAGGYFCAGMDLKAATKKPPGDSFKDYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAES--AKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQAL-------------TKALEIAEIIAANGPLAVQAILRT------------------------------------------IRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRK............................................................................................................................................................................................................................................................................................................................................................................................................................... 254
27 -46.700d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  20  1...........................MSYQYVNVVTINKVAVIEFNYG-RKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPS--GGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAAST--STFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHSEKAPLAIAVIKEELR.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 214
28 -46.700d4neka_ c.14.1.0 (A:) automated matches {Magnetospirillum magneticum [TaxId: 342108]}  ali model 3D-neighbors follow..  21  1.............................SELVLSHVEGGVQVVRMNRPDK-KNALIGEMYAALAEAFAKGEADDDVNVFLIL-GSQTDFSAGNDLPDFLTWEALSG-----SVADRFIRAVAGARKPVVAAVRGAAIGIGSTLLPHCDLVYAAPG--TRFHMPFINLGIVPEAGSSQTMPALAGHRRAAEMLMLGEPFGVDTAEAVGLINGVVPGEDLE-------------ETAMAAARKLAAKPRS-------------------------------------------ILVQIKALMKTPAEPIMDRLTREAAVFDTCLKGEALNEAVSAFKEKRA............................................................................................................................................................................................................................................................................................................................................................................................................................... 246
29 -46.300d3fdua1 c.14.1.0 (A:10-255) automated matches {Acinetobacter baumannii [TaxId: 400667]}  ali model 3D-neighbors follow..  22  2..............................PHLNANLEGGVLTLAINRPEA-KNALYGELYLWIAKALDEADQNKDVRVVVLR-GAEHDFTAGNDMKDFMGFVQNPNAPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNT--ALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVED---------------AYATAQATAQHLTALPLA-------------------------------------------SLKQTKALMKHDLDQIIECIDHEAEIFMQRVQSPEMLEAVQAFM................................................................................................................................................................................................................................................................................................................................................................................................................................... 246
30 -46.100d3rrva_ c.14.1.0 (A:) automated matches {Mycobacterium avium [TaxId: 1770]}  ali model 3D-neighbors follow..  19  3............................MPTEIDVRADGALRIITLNRPDS-LNSVNDDLHVGLARLWQRLTDDPTARAAVIT-GAGRAFSAGGDFGYLKELSADADLAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAEN--AYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHVADD---------------PVAEAIACAKKILELPQQAVESTKRV------------------------------------------LNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN................................................................................................................................................................................................................................................................................................................................................................................................................................ 253
31 -45.800d4og1a_ c.14.1.0 (A:) automated matches {Novosphingobium aromaticivorans [TaxId: 279238]}  ali model 3D-neighbors follow..  21  2........................PNMNFHDRVSVTIEDHVAHVLLDRADK-MNALDDAMFEGIVAAGHHLHSVKGVRCVVL-SGAGRSFCAGLDLSSMGRTDRTERTHGNANRAQQAAMVWRKLPMPVIAAVHGVCFGGGLQVASGADIRFITPD--ARLAVMEVKWGLVPDMAGYALWRGNVRDDVLRELTYTHREFSGEEAVRFGFATHVADD---------------PLAGAMELARVVAEKSPNAVRGAKTL------------------------------------------SNRAPDLTVDDVLMAESIAQHELMYSRNQMEAVKAGMEKRA............................................................................................................................................................................................................................................................................................................................................................................................................................... 262
32 -45.800d5e0nx_ c.14.1.0 (X:) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  20  1............................TRFVLLDRSRPGVALVTLNRPER-MNSMAFDVMVPLLELLGDLRHDNSVRVVILT-GAGRGFSSGADHKSAGSVTRPTYALRSMEVLDNVILALRRLHQPVIAAVNGAAIGGGLCLALACDVRIAAHN--AYFRAAGINNGLTASLGLSYLLPRAIGTSRAFEIMLTGRDVDAAEAERIGLVSRTVPDDDLLETCFEMAQRRGFSRPGIELTKRTLWSGLD.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 225
33 -45.700d4jfca_ c.14.1.0 (A:) automated matches {Polaromonas sp. [TaxId: 296591]}  ali model 3D-neighbors follow..  19  2...............................AIKSTSEGQTLILTLSNPEF-RNALGPEIYAAGIEALNAAENNPEIRSVVIT-GEGAVFCAGGNLQRLQANEAPEVQAQSIEGLHNWIDSIRTYPKPVIAAVEGAAAGAGFSLALACDFVVAASN--AVFVMSYSTVGLSPDGGGSWSLARSLPRALASELLMGGERISAQRLHDLGLVNKVASAGDALSEALRMAGQNARAPNALASIKELIN--------------------------------------------------------EASSNTLSQQLACERDHFVRNLHHSNGGEGIAAFLGKRT............................................................................................................................................................................................................................................................................................................................................................................................................................... 253
34 -45.300d4jota1 c.14.1.0 (A:1-253) automated matches {Deinococcus radiodurans [TaxId: 243230]}  ali model 3D-neighbors follow..  22  8..........................LTQRPLSQDGTTQGGTVATLTLA-AKMGSMGPAFWQEFPQALSE---LGDARVLIVRGEQ--VFSAGLDVKSNGALGKPDAFKAVVDEMHAVTEGLAALPMPVIAAVHGWCIGAGLELIAGADLRLCSQD--ARFSLPEVKLGITADLGGLQRLPHLIGRGRTAHLALTGEAIDAATAERWGLVTEVLPDQDALFARAEALAEHLAALPALEGTKRALSDGLP.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 229
35 -45.300d4jcsa1 c.14.1.0 (A:1-264) automated matches {Cupriavidus metallidurans [TaxId: 266264]}  ali model 3D-neighbors follow..  17  2..............................DTLDFEVVNNVGWIRMNRAAK-HNPFDAELRADLMTVLERVRDDADIRVLVLT-SHPGSFCAGGNLHVLRDNLDSGYWQQRIKTGLRFIHDMLNLGRPVIAAVDGPAFGAGFALSLTADIVLASPR--ARFSMAYLRLGLVPDLGALYLLPRAVGLQRAKELMFSTRELDAEEAHRLGLVMEVHESEALEQRAREIAESVQAAPTALALTKAALN--------------------------------------------------------VSLDSDEQTMFSLEAASQAAAFSTKEPRAAIEALLSKQP............................................................................................................................................................................................................................................................................................................................................................................................................................... 254
36 -45.300d3gowa_ c.14.1.0 (A:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}  ali model 3D-neighbors follow..  24  2................................VLKERQDGVLVLTLNRPEK-LNAITGELLDALYAALKEGEEDREVRALLLT-GAGRAFSAGQDLTEFGD--RKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVG--ASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVPAEKLM-------------EEALSLAKELAQGPTRAYALTKKL------------------------------------------LLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRP............................................................................................................................................................................................................................................................................................................................................................................................................................... 248
37 -45.100d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}  ali model 3D-neighbors follow..  22  1............................MYEAIGHRVEDGVAEITIKLPRH-RNALSVKAMQEVTDALNRAEEDDSVGAVMIT-GAEDAFCAGFYLREIPLDKGVAGVRDAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADS--AKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFR-------------EVAWKVARELAAAPTHLQVMAKER------------------------------------------FHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQVELPAGV................................................................................................................................................................................................................................................................................................................................................................................................................... 269
38 -45.000d5dufa1 c.14.1.0 (A:1-243) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  21  2................................IGITQAEAVLTIELQRPER-RNALNSQLVEELTQAIRKA-GDGSARAIVLT-GQGTAFCAGADLSGD------AFAADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPD--AFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLAD-----------------AQAWAAEIARLA--------------------------------------------PLAIQHAKRVLNDDGAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRP............................................................................................................................................................................................................................................................................................................................................................................................................................... 237
39 -44.800d4lk5a_ c.14.1.0 (A:) automated matches {Mycobacterium avium [TaxId: 262316]}  ali model 3D-neighbors follow..  19  1..........................LAPVAGLDVTLSDGVFSVTINRPDS-LNSLTVPVITGIADAMEYAATDPEVKVVRIG-GAGRGFSSGAGISADDVSDGGGVPDEIILEINRLVRAIAALPHPVVAVVQGPAAGVGVSIALACDVVLASEN--AFFMLAFTKIGLMPDGGASALVAAAVGRIRAMQMALLPERLPAAEALAWGLVTAVYPADEFEAEVDKVIARLSGPAVAFAKTKLAINAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 219
40 -44.600d3myba_ c.14.1.0 (A:) automated matches {Mycobacterium smegmatis [TaxId: 246196]}  ali model 3D-neighbors follow..  18  4...............................LLQDRDERGVVTLTLNRP-QAFNALSEAMLAALGEAFGTLAEDESVRAVVL-AASGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRD--ARFAVSGINVGLFCSTPGVA-LSRNVGRKAAFEMLVTGEFVSADDAKGLGLVNRVVAPKA-------------LDDEIEAMVSKIVAKPRAAVAMGKAL------------------------------------------FYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRR............................................................................................................................................................................................................................................................................................................................................................................................................................... 252
41 -44.200d4qiia_ c.14.1.3 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}  ali model 3D-neighbors follow..  13  12...................RLVDGFDDLTDITYHRHVDDATVRVAFNRP-EVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGGWAFCSGGDQRIRGRADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASRE-YARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAE-------------LETVGLQWAAEINAKSP--------------------------------------------AQRMLKFAFNLLDDGLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRP............................................................................................................................................................................................................................................................................................................................................................................................................................... 290
42 -43.600d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}  ali model 3D-neighbors follow..  16  1.....................LASLEARYPGLAFAWPRPGVLEITFR--GEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLR-GEGGVFSAGGSFGLIEEMRASHELLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKG--TRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVY-------------EKALEVAERLAQGPKE-------------------------------------------ALHHTKHALNHWYRSFLPHFELSLALEFLGFSGKELEEGLKALKEKRP............................................................................................................................................................................................................................................................................................................................................................................................................................... 259
43 -43.500d2j5ga_ c.14.1.0 (A:) automated matches {Nostoc sp. PCC 7120 [TaxId: 103690]}  ali model 3D-neighbors follow..  15  15...................................RDENGILEVRMHTNGS-SLVFTGKTHREFPDAFYDISRDRDNRVVILT-GSGDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHS-EYILTTDIILASENTVF-QDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTAKQPTLNLRYTRVALTQRLK.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 225
44 -43.300d1wdka1 a.100.1.3 (A:497-620) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}  ali model 3D-neighbors follow..  27  1......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVYEQR................................................................................................. 124
45 -43.200d4k3wa_ c.14.1.0 (A:) automated matches {Marinobacter aquaeolei [TaxId: 351348]}  ali model 3D-neighbors follow..  22  2..............................ETLILEKQGPTLVITINRPDV-RNAMSLQMVAELSTIFSEIENDISIRAAVLR-GAGGHFCAGGDIKDMAGARSDDPFYKLNRAFGQMIQQVNESSKVVIAITEGAVMGGGFGLACVSDLAIAGPT--AKFGMPETTLGVIPAQIAPFVVER-IGLTQARRLALLGLRIDATEACKLGIVHQVAESEEQLSDMLNQALERVRLCAATAETKALLH--------------------------------------------------------RVGHEAMAGLLDDAAEKFAAAIRGPEGAEGTMAFMQKRE............................................................................................................................................................................................................................................................................................................................................................................................................................... 259
46 -43.100d3tlfa_ c.14.1.0 (A:) automated matches {Mycobacterium avium [TaxId: 1770]}  ali model 3D-neighbors follow..  17  4..............................DTIKYEVDGHTATITLNRPDA-LNALSPHMITELRAAYHEAENDDRVWLLVVT-GTGRAFCSGADVKEIPEDGKVISTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQ--ATFFDPHVSIGLVAG-RELVRVSRVLPRSIALRMALMGKRMSAQRAYELGLISEIVEHDRLL-------------ERAHEIADIVNSNAPLAVRGTRLA------------------------------------------ILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQ............................................................................................................................................................................................................................................................................................................................................................................................................................... 261
47 -42.900d3i47a1 c.14.1.0 (A:4-260) automated matches {Legionella pneumophila [TaxId: 272624]}  ali model 3D-neighbors follow..  22  1..............................SDLLYEIQDKVGLLTMNRISK-HNAFDNQLLTEMRIRLDSAINDTNVRVIVL-KANGKHFSAGADLTWMQSMATEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTS--ARFCFSEVKLGLIPA-VISPYVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQSNNAPEAVKNSKQLAQY............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 214
48 -42.900d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  3..............................ETLVVTSEDGITKIMFNRPKK-KNAINTEMYHEIMRALKAASKDDSII--TVLTGNGDYYSSGNDLTNFTDIPPEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDR--ATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAAKLPPNALRISKEVIRKR............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 218
49 -42.900d3oc7a_ c.14.1.0 (A:) automated matches {Mycobacterium avium [TaxId: 243243]}  ali model 3D-neighbors follow..  21  2.........................DALVDYAGPAATGGPVARLTLNSPHN-RNALSTALVSQLHQGLRDASSDPAVRVVVL-AHTGGTFCAGADLSEAGSGGSPDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPR--SSFALTEARIGVAPAIISLTLLPK-LSARAAARYYLTGEKFDARRAEEIGLITMAAED---------------LDAAIDQLVTDVGRGSPQGLAASKAL------------------------------------------TTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRS............................................................................................................................................................................................................................................................................................................................................................................................................................... 258
50 -42.600d2gtra_ c.14.1.3 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  3..............................RDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDS--KLVLLSAVGSVFCCGLDFIYFIRRLTDDESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEK--AWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKEASCNPVVLEESKALVR--------------------------------------------------------CNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKI............................................................................................................................................................................................................................................................................................................................................................................................................................... 256
51 -42.500d2q35a1 c.14.1.0 (A:17-257) automated matches {Lyngbya majuscula [TaxId: 276768]}  ali model 3D-neighbors follow..  14  5..................................TELGNGVVQITMKDESS-RNGFSPSIVEGLRHCFSVVAQNQQYKVVILT-GYGNYFSSGASKEFLIRKTRGE------VEVLDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQE--SVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKELAERGIPFPVVSRQDVL-------------NYAQQLGQKIAKSPRLSLVALKQ------------------------------------------HLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF................................................................................................................................................................................................................................................................................................................................................................................................................................... 241
52 -42.500d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  23  9...................................SAQKHVLHVQLNRPEK-RNAMNRAFWRELVECFQKISKDSDCRAVVV-SGAGKMFTSGIDLMDMASARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQD--AFFQVKEVDVGLAADVGTLQRLPKVIGNRSVNELTFTARKMMADEALDSGLVSRVFPDKD------------VMLNAAFALAADISSKSPVAVQGSKIN------------------------------------------LIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSK............................................................................................................................................................................................................................................................................................................................................................................................................................. 268
53 -42.400d1hnua_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  16  1.............................NEKISYRIEGPFFIIHLINPDN-LNALEGEDYIYLGELLELADRNRDVYFTIIQ-SSGRFFSSGADFKGIAKAQGDDTVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSIND-KVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREPSCLGMKKLLKSN............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 232
54 -42.400d3hp0a_ c.14.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 1423]}  ali model 3D-neighbors follow..  18  3..............................QTIKVRFQASVCYITFHRPEA-NNTINDTLIEECLQVLNQCE-TSTVTVVVL-EGLPEVFCFGADFQEIYQMKRGRKQASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQT--ASFSLSELLFGLYPA-CVLPFLIRRIGRQKAHYMTLMTKPISVQEASEWGLIDAFDAESDVL----------------------------------------------------------LRKHLLRLRRLNKKGIAHYKQFMSSLDHQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQ............................................................................................................................................................................................................................................................................................................................................................................................................................... 249
55 -41.400d4k29a_ c.14.1.0 (A:) automated matches {Xanthobacter autotrophicus [TaxId: 78245]}  ali model 3D-neighbors follow..  26  3..............................SKILYETLHGVARITLNRPER-TNALDQEMLGEINAAMDAAEADAGVKAVIVR-GAGNAFSSGFDLKAQMEPAGVDAWRPLLRKDFDTVMRFWHCPKPTIAAVRGPCLAGACELALACDMTIATED--AFFGEPELKFG---AGIVVMLLPWIVGPKIAKEIILLGEDVPARRAAEIGMVNRVVDGDGLDAEALRIARHGAIDPGLVKETKRALNRALE.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 218
56 -37.200d1wdka2 a.100.1.3 (A:621-715) Fatty oxidation complex alpha subunit, C-terminal domain {Pseudomonas fragi [TaxId: 296]}  ali model 3D-neighbors follow..  31  1..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQYAEL--GALYHPTAKLREMAKNGQSFFG 95
57 -33.000d1f0ya1 a.100.1.3 (A:204-302) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  27  1......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GFIVNRLLVPYLMEAIRLYERGASKEDIDTAMKGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK............................................................................................................................ 99
58 -32.900d3daga1 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Methanocaldococcus jannaschii [TaxId: 2190]}  ali model 3D-neighbors follow..  12  13..........................................................................................................................................................................................................................................................................................................THAAAGITNFMRACEVAKE------VGKPEIALTHSSITYGAELLHLVPDVKEVIVSDPCFAEEPGLVIDEFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKPPKACIHLVHPEDVGLKVTSDDEAVEGADIVITWLPKG-NKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGPEMKGQVYIAEGYASEEAVNKLYEIGKIARGKAFKM................................................................................................................................................................................................................................. 241
59 -30.900d4pzda2 a.100.1.0 (A:186-284) automated matches {Ralstonia eutropha [TaxId: 381666]}  ali model 3D-neighbors follow..  37  1......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GFVVNRILCPMINEAFCVLGEGASPEEIDEGMKGCNHPIGPLALADMIGLDTMLAVMEVLYTEFADP-KYRPAMLMREMVAAGYLGRKTGRGVYVYSK........................................................................................................................... 99
60 -14.200d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. PCC 6803 [TaxId: 1148]}  ali model 3D-neighbors follow..  17  2.................................................................................................................................................................................................................................................................................................................................................................KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER--------------------------EAGQDLSLLQTAKIIFLCT---IQLILPTLEKLIPHLSPTAIV-TDVASVKTAIAEPASQLWSGFIGGHPMAGTAAQNLFVLTPTEYTDPEQLACLRSVLEPLGVKIYLC................................................................................................................................................................................................................................. 165
61 -13.900d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}  ali model 3D-neighbors follow..  22  6............................................................................................................................................................................................................................................................................................................................................................NSDIHKIVIVGGGKLGGLFARYLRASGYPISILDREDWAVAE------------------------------------SILANADVVIVSV--PINLTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHTGAVLGLHMFGAIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIY................................................................................................................................................................................................................................... 150
62 -13.100d3fr7a1 c.2.1.0 (A:86-307) automated matches {Oryza sativa [TaxId: 39947]}  ali model 3D-neighbors follow..  11  22.............................................................................................................................................................................................................................................................................................................................................IVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWET------------VSGSDLVLLLI--SDAAQADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRFAVHQDVDGRATDVALGWSVALGSPFTF.................................................................................................................................................................................................................................. 219
63 -12.700d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}  ali model 3D-neighbors follow..  15  1...............................................................................................................................................................................................................................................................................................................................................................MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN------------------PESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS---VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSNLYELTPTKKTDKKRLKLVKRVWEDVGGVVEYM................................................................................................................................................................................................................................. 171
64 -12.000d4ajjc1 c.2.1.0 (C:1-159) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  17  3...............................................................................................................................................................................................................................................................................................................................................LKDQLIVNLLKEEQVPQNKITVVGVGAVGMACAISILMKDLELALVDVIEDKLKG-------------EMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVINLVQRNVNIFKFIIPNVVKYSPQCKLLVSN----PVDILTYVAWKKNRVIG............................................................................................................................................................................................................................................................................ 159
65 -11.900d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}  ali model 3D-neighbors follow..  17  2................................................................................................................................................................................................................................................................................................................................................................TKLAVIGAGAVGSTLAFAAAQRGIEIVLEDIAKERVEA-------------EVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVELVGATVNILKAIMPNLVKVAPNAIYMITN----PVDIATHVAQKENQIFGS........................................................................................................................................................................................................................................................................... 142
66 -11.800d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}  ali model 3D-neighbors follow..  12  2.................................................................................................................................................................................................................................................................................................................................................................KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSK----------------------EIAEQLALPYAMSHQDLIDQVDLVI------LGIKPQLFETVLKPLHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQIQSSTALTGNALVSQELQARVRDLTDSFGSTFDI.................................................................................................................................................................................................................................. 150
67 -11.800d3nepx1 c.2.1.0 (X:22-163) automated matches {Salinibacter ruber [TaxId: 309807]}  ali model 3D-neighbors follow..  18  2.................................................................................................................................................................................................................................................................................................................................................................KVTVIGAGNVGATVAECVARQDVEVVMVDIKDGMPQGKALDMRE------------SSPIHGFDTRVTGTNDYGPTEDSDVCIDLLAKNTEIVGGVTEQFVEGSPDSTIIVAN----PLDVMTYVAYETNRVMGM........................................................................................................................................................................................................................................................................... 142
68 -11.800d2v6ba1 c.2.1.0 (A:22-164) automated matches {Deinococcus radiodurans [TaxId: 1299]}  ali model 3D-neighbors follow..  17  2.................................................................................................................................................................................................................................................................................................................................................................KVGVVGTGFVGSTAAFALVLRGSELVLVDRDEDRAQAEAEDI--------------AHAAPVSHGTRVWHGGHSELADAQVVIDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS........................................................................................................................................................................................................................................................................... 138
69 -11.700d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}  ali model 3D-neighbors follow..  22  2................................................................................................................................................................................................................................................................................................................................................................RKIGIIGLGNVGAAVAHGLIAQGVDYVFIDANEAKVKA-------------DQIDFQDAMANLEAHGNIVINDWAALADADVVIAELKFTSSMVQSVGTNLKESGFHGVLVISN----PVDVITALFQHAHKVIG............................................................................................................................................................................................................................................................................ 145
70 -11.500d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Methanococcus jannaschii [TaxId: 2190]}  ali model 3D-neighbors follow..  13  2.................................................................................................................................................................................................................................................................................................................................................................KVTIIGAGRVGSATALLLAKEPFDLVLIGREHS--------INKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIDLAKTNAKIVGKYAKKIAEICDTKIFVITN----PVDVMTYKALVRNQVFG............................................................................................................................................................................................................................................................................ 145
71 -11.500d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  12  2.................................................................................................................................................................................................................................................................................................................................................................IVSILGAGAMGSALSVPLVDNGNEVRI----------GTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKLENAEVVLLGV--STDGVLPVMSRILPYLKDQYIVLISKGLIDFD---NSVLTVPEAVWRLKHDLRERTVAIEVAKRMPTTVVFSSPSESSANKMKEI..................................................................................................................................................................................................................................... 168
72 -11.400d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}  ali model 3D-neighbors follow..  17  4................................................................................................................................................................................................................................................................................................................................................................AKIVLVGSGMIGGVMATLIVQKNLDVVLFDIVKNMPHGKALDTSH------------TNVMAYSNCKVSGSNTYDDLAGADVVIDLLPLNNKIMIEIGGHIKKNCPNAFIIVTN----PVDVMVQLLHQKNKIIGL........................................................................................................................................................................................................................................................................... 149
73 -11.200d4ypoa1 c.2.1.0 (A:1-180) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  11  4.....................................................................................................................................................................................................................................................................................................................................................DDDADLSIIQGRKVGVIGYGSQGHAHSLSLRDSGVQVRVGLKQGSRS-----------RPKVEEQGLDVDTPAEV------------AKWADVVMVLAPDTAQAE-IFAGDIEPNLKPGDALFFGHGL-DVAVAMVAPKGPGHLVRRQFVDGKGVPCLVAVEQDP--RGDGLALALSYAKAIGGTRAGVIKT.............................................................................................................................................................................................................................. 179
74 -10.800d3k96a1 c.2.1.0 (A:3-180) automated matches {Coxiella burnetii [TaxId: 227377]}  ali model 3D-neighbors follow..  17  4................................................................................................................................................................................................................................................................................................................................................................HPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDE-----------QAEGVNNRYLPNYPFPETLKAYCDLKALEGVTDILIVV--PSFAFHEVITRMKPLIDAKTRIAWGTKGLALHEVVATELGQVPMAVIS--GPSLAT---EVAANLPTAVSLASNNSQFSKDLIER----------LHGQRFRVYKND............................................................................................................................................................................................................... 178
75 -10.800d4m1qa1 c.2.1.0 (A:3-144) automated matches {Bacillus selenitireducens [TaxId: 439292]}  ali model 3D-neighbors follow..  20  4................................................................................................................................................................................................................................................................................................................................................................SRVVIIGTGAVGSSYAFSMINQNVEMVLIDLDKRKTEGDAMDL--------------NHGIPFGAPTKVWAGDYGDCKSADIVVDLVEKNANIFKGIVDQVMGSGFNGIFIATN----PVDVLAYATWKKERVIG............................................................................................................................................................................................................................................................................ 142
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.