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Query: [S] KOG2172 Uncharacterized conserved protein, from COG1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGGGEKRKSSFKNLANAKKRRTGPHLPSSILKTIANEKRPLNSDEGDDEIDSAYGDFYEYEEGVPEEESRKNNRYERVVNYEFELAEDCEDENVESEDDDDDDDDDDDDRHSRMLKNVTELPISAFQGESKNKRVVFTEPYPESEFNPTRDVLEGKSLTTIDDFMEPLQGLHGNSQLSNMISRMRKDTQSLVHAPLPKPEQERLERDVANELVYKGFDIWVPLVKRNREAPTIYFNQDVNVGYSTVGAIASQFHPRTEFEMKMASLLDDHEILEAHKEDGARLLEFNEVSMEDHIKRRNHVAKMRSMLFRVDLKHKRIKQIKSKTYHRLKNKDLNQSGVGAFMEPAMAKEEAKKQEARRVKERMTLKHKNTGQWAKRMLSRGLNRKYDVTQAALSKQLQIHATLSRKMNSTKDESSSDEEDLNDGSDQDTSKLIAEAKEKILKTVDDDEVPISRLMSLPFMARAVKKKNEEAKEEGKRDIEELEKFGGAETSKKSTNVVGRRVFGAEAPKESEKESDNLFDNSDSSDNDMEDNELEAVKDNASPARNTETIMEAEKLDDIAGNPASKTTFDVALYASGSWKKMTGCKNAESKKASKTHVPISQSQDKKESSDSESDDSESDDSESEAEQMVDGILTCGSKETYEIPCQAELVSRAFAGDDVEGDFEKDKQEVLNQEVPEPEKPVQVAGWGHWTNNQNKRGLPSRIVREHEEAKKTREQALRKRKDASFKHVIISEKVDKKAEKLQTKSLPYPYTSKEVFEQSMRMPIGPEFNPTTIVGVLNRPEVVKKAGVIIKPVKFEEVNPNDEHPRSHQKQKPKKKGGKLast
1 -5.930d3gl3a1 c.47.1.0 (A:30-168) automated matches {Chlorobium tepidum [TaxId: 194439]}  ali model 3D-neighbors follow..  13  4...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DKAPDFALPGKTGVVKLSDKTGSVVYLDFWASWCGP--FPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLVAFDPKGQTPRLYGVKGMPTSFADKEALEQQILAALG...................................................... 139
2 -5.860d2phcb1 b.62.1.4 (B:86-217) Uncharacterized protein PH0987 {Pyrococcus horikoshii [TaxId: 53953]}  ali model 3D-neighbors follow..  10  1...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IEIP-YGGEFGPDIEFVAQYNGLSVDD---------------------VIEIHSKPLYRVYFLGFLPFAYLG--GMDERIATP------------RLEKPRLKVPAGSVWYAIESP....................... 91
3 -5.840d4ld8a2 b.31.1.1 (A:203-308) automated matches {Sudan ebolavirus [TaxId: 186540]}  ali model 3D-neighbors follow..  22  10......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KLRPVLLPGKTGKKGHVSDLTA-PDKIQTIVNLMQDFKVPIDPAKSPELLVHKLTGKKMSQKNGQPIIPVLLPKYI.................... 91
4 -5.650d1dkva5 b.14.1.0 (A:356-513) automated matches {Homo sapiens}  ali model 3D-neighbors follow..  13  1................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................WGNWSTAGGCRNYPNTFWMNPQYLIKLEEEDEDEEDGESGCTFLVGQKHRRRQRKMGEDMHT-TFINLREVLNRFKLPPGE----------ILVPRVFSEKKADYQAVD......................... 158
5 -5.630d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}  ali model 3D-neighbors follow..  10  12......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDRDFQFVEPFATALVEDKVLAHTAKAEAEIASAVIAE-------EALTFEHPY----REPLWTQLITAYDRQSDALGAYRR-VKTTLADDLG--IDP........................... 139
6 -5.540d2ls5a1 c.47.1.0 (A:4-151) automated matches {Bacteroides thetaiotaomicron [TaxId: 226186]}  ali model 3D-neighbors follow..  13  16...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TLTDGKQVTLSSLRGKVVMLQF-----------------------TASWCGV------------RKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYA--------LRDAGITRLIDREGKIVK............................ 126
7 -5.500d1zc6a2 c.55.1.5 (A:122-292) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}  ali model 3D-neighbors follow..  14  24...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................REAGGWGAWLGQRAAQLTQMALDGRHSHSPLTRAVRATPAQFARLAPLVLSAARVDPEADALLRQ------AGEDAWAIARA-CGRDWLPPGFRQRLVAPQGDSAQGALL............................. 168
8 -5.490d1huwa_ a.26.1.1 (A:) Growth hormone, somatotropin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  7  3.............................................................................................................................................................TIPLSRLADAWLRADRLNQLAFDTYQEFEEASESIPTPSNKEETQQKSNLELLRISLLLIQSWLEPVQ------FLRSVFANSLVYGASDSNVY--DLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFNKDMSKVSTYLRTQCRSVEG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 187
9 -5.450d1y5ea1 c.57.1.1 (A:12-166) MoaB {Bacillus cereus [TaxId: 1396]}  ali model 3D-neighbors follow..  10  9...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TISDTRTEETDKSGQLLHELLKEAGIVKDDKESIQQAVLAGYHKEDVDVVL----TNGGTGITKRDVTIEAVSALLDKEIVGFGELFRMEDIGSSAMLSRAIGGTIGRKVVFSMP-----------------GSSGAVRLAMNKLILPELGHITFEL.............................. 155
10 -5.390d2b1ka_ c.47.1.10 (A:) automated matches {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  15  19..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DNPGQFYQADVLTQGKPVLLNVWATWCPT------------------RAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALS-DGDGMLGLDLGVYGAPET---------LIDGNGIIAGDLNPRVWEEEIKPLWEKYSKEAA..... 149
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67.