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Query: [MU] KOG2516 Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family), from COG1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRWSVLDTVLLTVISFHLIQAPFTKVEESFNIQAIHDILTYSVFDISQYDHLKFPGVVPRTFVGAVIIAMLSRPYLYLSSLIQTSRPTSIDVQLVVRGIVGLTNGLSFIYLKNCLQDMFDEITEKKKEENEDKDIYIYDSAGTWFLLFLIGSFHLMFYSTRTLPNFVMTLPLTNVALGWVLLGRYNAAIFLSALVAIVFRLEVSALSAGIALFSVIFKKISLFDAIKFGIFGLGLGSAISITVDSYFWQEWCLPEVDGFLFNVVAGYASKWGVEPVTAYFTHYLRMMFMPPTVLLLNYFGYKLAPAKLKIVSLASLFHIIVLSFQPHKEWRFIIYAVPSIMLLGATGAAHLWENMKVKKITNVLCLAILPLSIMTSFFISMAFLYISRMNYPGGEALTSFNDMIVEKNITNATVHISIPPCMTGVTLFGELNYGVYGINYDKTENTTLLQEMWPSFDFLITHEPTASQLPFENKTTNHWELVNTTKMFTGFDPTYIKNFVFQERVNVLSLLKQIIFDKTPTVFLKELTANSIVKSDVFFTYKRIKQDEKTDLast
1 -6.710d3brda2 b.2.5.8 (A:195-380) DNA-binding protein LAG-1 (CSL) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}  ali model 3D-neighbors follow..  10  22............................................................................................................................................................................................................................................................................................................................VISIFHAKVAQKEKRFFCP--PPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDNAQFFYGCGMEIGGFV--VISKPSKKKQSMKNTD............................................................................ 186
2 -6.010d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]}  ali model 3D-neighbors follow..  10  34...........................................................................................................................................NFDEFLKAASDPAVWKVVLTTYYAALISTLIAVIFGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDALPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVAGAIMSWARGISEFGAVVVIAPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVF........................................................................................................................................................................................................... 244
3 -5.870d4al0a_ f.56.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  9  68.....................................................................................................................................................................................................................................................................NDMET-----------------IYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCAS............................................................................................................................................................................................................... 133
4 -5.660d1pw4a1 f.38.1.1 (A:5-448) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  11  22LRWQIFLGIFFGYAAYYLVRKNFA-VEQGFSRGDLGFALSGISIA---YGFSKFIMGSVSDRSNPLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWWHAALYMPAFCAILVALFAFAMMIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA-------------YWMNPAGNPTVDMICMIVIGFLIY-----------VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM....................................................................................................................................................................... 431
5 -5.430d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Norway rat (Rattus norvegicus) [TaxId: 10116]}  ali model 3D-neighbors follow..  15  69.....................................................................................................................................................................................................................................................................NDLEN-----------------IVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAYLTPLPQPNRGLAFFVGYGVTLS............................................................................................................................................................................................................... 134
6 -5.410d4ogqb_ f.32.1.1 (B:) automated matches {Nostoc sp. [TaxId: 103690]}  ali model 3D-neighbors follow..  11  35......................................................................................................................................................................................................................................LLYVFPIVIMGSFACIVALAVLDPAMTGEPANPFATPLE---ILP-EWYL-----------------------------------YPVFQILRSLPNKLLGVLAMASVPLGLILVPFIENVNKFQNPFRRPVATTVFLFGTLVTLWL.............................................................................................................................................................................. 142
7 -5.230d1dq3a2 d.50.3.1 (A:336-414) PI-Pfui intein middle domain {Pyrococcus furiosus [TaxId: 2261]}  ali model 3D-neighbors follow..  12  7..................................................................................................................................................................................................................................................................LNFNAFKEWASEYGVE----FKTNGSQTIAIINDERISLGQWHTRNRVSKAVLVKML-----LYEATKDEEVKRMLHLI...................................................................................................................................................................................................................... 78
8 -5.050d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  19  16.......................................................................................................................................................................................................................................................WKAAKTADGKVYYYNPTTRETS-W-TIP.................................................................................................................................................................................................................................................................................... 41
9 -4.990d2wdqd_ f.21.2.2 (D:) Succinate dehydrogenase subunit SdhD {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  5  2...............................................................................................................................................................................................................................................................................GVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFTKVFTLLALFSILIH----------------AWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVV....................................................................................................................................................................... 102
10 -4.960d1fftc2 f.25.1.1 (C:25-203) Cytochrome O ubiquinol oxidase, subunit III {Escherichia coli [TaxId: 562]}  ali model 3D-neighbors follow..  13  1..........................................................................................................................................KIFGFWIYLMSDCILFSILFAT--------YAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYK--NNKSQVISWLALTWLFGAGFIGMEIY------------EFHHLIVNGMGPDRSGFLS---AFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLF-------WHFLICVFTVVYLMGA.............................................................................................................................................................................................................. 179
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.