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Query: [OKIT] KOG2642 Alpha-1,2 glucosyltransferase/transcriptional activator, from COG1018

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTKSKPPRISLPFAAISRKSDFLLGASFSCIHVLLTTIVYHYVPEPYMDEIFHITQTRSYCSGNYSWNPLITTPPALYVISMPLCGGNERYANSILLFFAIPAFCRFRRMFVRVRIPTLKIYLKNTDLQQDVWLTASIVGMLPILISSSILFYTDLLSLTSVIWGFSIGNPIASAFLFLISILTRQTNIIWAAIYAFSVIASRIDKSRSKMENLKIIISTAFSLWPFITLAIGFAMFIYFNDFQIVLGDAKAHQPKFHVAQFFYMVAFCAAHTWTQIIPNLLSHLRHLTDMKSLVLQAVVAVLVYYYSYDHPYLLADNRHFTFYIWRRFLANPTMRTTLAPLYVFSLRFMTTSTPSVHIFHKILFIIASLLVLVPAHLFEMRYYIIPYVLWRLSTVNNSRKSLLFLEIISQAVIFAANEFVQKLQQKNEKEIKISRIQLast
1 -6.650d1x3ha2 g.39.1.3 (A:43-74) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  17  1......................................VCGDCFTSFSTGSFFELDGRPFCELHYH.................................................................................................................................................................................................................................................................................................................................................................................... 28
2 -5.920d3ag3g_ f.23.2.1 (G:) Mitochondrial cytochrome c oxidase subunit VIa {Cow (Bos taurus) [TaxId: 9913]}  ali model 3D-neighbors follow..  12  1ASAAKGDHGGTGARTWRFLTFGLALPSVALCTLNSWLHSGHRERPAFIPYHHLRIRTKPFSWGDFFHNPRVNPLPTGY........................................................................................................................................................................................................................................................................................................................................................................ 82
3 -5.890d3mksb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}  ali model 3D-neighbors follow..  19  6..........................................................................................................................................ITSLPFEISLKIFNYLQFEDIINS-----------LGVSQNWNKIIRKSTSLW....................................................................................................................................................................................................................................................... 47
4 -5.620d2dara1 g.39.1.3 (A:53-84) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  7............................................NTMAYIGFVEEKGALYCELCYE.................................................................................................................................................................................................................................................................................................................................................................................... 28
5 -5.020d1u5sb2 g.39.1.3 (B:103-137) Pinch (particularly interesting new Cys-His) protein {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  18  8............................................KPFLGHRHYERKGLAYCETHYN.................................................................................................................................................................................................................................................................................................................................................................................... 29
6 -4.510d5l3ma_ g.1.1.1 (A:) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  11  1...AYRPSETLCGGELVDTLQFVCGDRGFYFSRPASRVSRRSPQRGIVEECCFLALLETYCA........................................................................................................................................................................................................................................................................................................................................................................................ 63
7 -4.400d4r5ra_ g.20.1.1 (A:) Kistrin (rhodostomin) {Agkistrodon rhodostoma [TaxId: 8717]}  ali model 3D-neighbors follow..  10  8..SPENPCCDAATCKLRPGAQCGEGLCCEQCKFKKKRTICRIPRGDMPDD---------RCTGQSADCPR................................................................................................................................................................................................................................................................................................................................................................................ 66
8 -4.300d2jafa_ f.13.1.1 (A:) automated matches {Halobacterium salinarium [TaxId: 2242]}  ali model 3D-neighbors follow..  9  1....................................................................................................................................................................................AVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGLLSGTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLFRWAFYAI------------CAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLVVV--------WLGYP-IVWAVGVEGLALVQSVGATSWAYSVLDVFAKYVF................ 224
9 -4.280d1x61a2 g.39.1.3 (A:35-66) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  25  1......................................VCSTCRAQLRGQHFYAVERRAYCEGCYV.................................................................................................................................................................................................................................................................................................................................................................................... 28
10 -4.210d1iaka2 d.19.1.1 (A:1-81) Class II MHC alpha chain, N-terminal domain {Mouse (Mus musculus), I-AK [TaxId: 10090]}  ali model 3D-neighbors follow..  20  30................................................DELFYV---------DLDKKETVWMLPEF......................................................................................................................................................................................................................................................................................................................................................................... 49
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Flexible structure alignment by chaining aligned fragment pairs allowing twists. Bioinformatics. 2003 Oct;19 Suppl 2:II246-II255.