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Query: [E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance), from COG1018

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLAIGMVTAGIGPFSAAVAGFMVNFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSARPPGDISGTRVLTVQILCQALWVIPGIIGALVGQVLPDDLKGMDFALTALFVVLAWEAFKNNKDYSLPLFAVVLALVSGFVAPEQMLVIALTTYFLILLLRVRFPNLDKKLEIRTSHELast
1 -101.000[E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance)  ali follow..  100  1MSSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLAIGMVTAGIGPFSAAVAGFMVNFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSARPPGDISGTRVLTVQILCQALWVIPGIIGALVGQVLPDDLKGMDFALTALFVVLAWEAFKNNKDYSLPLFAVVLALVSGFVAPEQMLVIALTTYFLILLLRVRFPNLDKKLEIRTSHE 237
2 -9.440[P] KOG4505 Na+/H+ antiporter  ali follow..  11  35.............KLFLGEATMATATGLIFGPYVAKL-TEELARVLLVVEVFAAGAELGFMYALIPRLSFLESLAIAACITATDPVLASSIVGKGKFARRVPGHLRNMLLAESLAIYLIIEKPARHAGRDWVCIIILYEC-TFGCVLGAIIGVIARKMIKFSEFYFVLALFCGGIGTIIGVDDLLVSFCAGAAKTEESHVSNVIDLLLNLSFFVYVGAIM................. 312
3 -8.000[O] COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase  ali follow..  16  173.................FLGKDIIALGMLIE--DKPFYWRIPGIIEHALIVII----TLVAYKITKSYLASSIAATFAALDPLLFATG------------------VAMLDIHVAF------------FIALFMLFLALDRIR--LSGIALGLAAATKLSGA-FAFPILWFKILKEKDLKEYLISGLVLPMVSFLI......................................... 314
4 -7.760[R] KOG3762 Predicted transporter  ali follow..  384..............HILLFFVSVVVMGGGAGLVFS-FGILSVVNHASEIITY-----FYVFKLINKYGHVRVMYLCLAVNFFRFMALSILDNPWM-------VLPLQILQGACLAT--------------VWSCASSYISLVAPPHAKQHAQYALQVGYHGIGKGLGSIIGGSVISIIGTRTTFVIYGLICLATCAGSFGL.................................... 558
5 -7.420[O] COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase  ali follow..  15  51AVSHLDTIVMPIIFTVLGMFTRMYKIGRNNHVVWDEAHFKMLVGLSGYLAGYNGSWDFPSGEVYPDYIDYVKMRLFQAMFSSLCVPLAYFTGRAIGFSRLSVWLFTILVIENSYATLGKFILLDSMLLFFTVSSYFCLAKWLWLCLTGLNLGCAISVKMVGL-FIISVVGIYTISELWNLLSDRSVSWKVYVNHWLARIFG----LIIIPVCVFLLCFKI................. 300
6 -7.380[S] COG5438 Predicted multitransmembrane protein  ali follow..  11  151.........KNGFKSIIGIVSTLICI-IFLFVPMIYNGYSPILACLLIVVLTTGISAKTISAAFGTILGVVISIIVGIIMKVQGLLLTCVIIASL------------ALLDLSVSIASSIQEVYQSNKKLTVKQLFKSGMNIGKDLMGTMANTLI--------LAFTGSSLNVLVVIYAYNISFTQMINMDIISVIIEGVAGSLAVVLTVPITAFICSKIIPFVDMKLLEKNEKSIN 393
7 -7.250[G] COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC  ali follow..  11  33.................PLVACTL-IGLVTGHLEAGVILGGTLQMLALGWANIGAA-AAAIIMVKSGDFTQKGITFAYSTAIPLAVAGLFLTMIVRTLSTALVHAGDKAAAEGNFAGIERFHFIALLLQGLRIAVPAALLVAVPTAVQSVLNAMPNWLNEGMQIGVVAVGYAMVINMMATREVWPFFALGFALAAIS-----QLTLIAMGVIGVAIAFIYLNLSKKGGNGGNAAGSA 259
8 -7.210[S] COG5530 Predicted integral membrane protein  ali follow..  89.................AITVVAAMLSVSLSTASAHHGVLLFAMLLILLLLWIEARRYRFFDFYRARVRQFE-------------YFAQIFSPQPDFASDWLLIVGEGLRAPKFLLSQRAALARRLRRNYIYLFLILLLAWVL-AALGPIPGVAI----VVGVAAFYAWLFAIVL.............................................................. 256
9 -7.070[E] COG1280 Putative threonine efflux protein  ali follow..  16  29.....TLGMSVGYRRTLWMMVG-ELLGVALVAVSAVVGIAAVYPDIFTLFKIVGASYLVYLGV-GSDWGLLVQGFVTAIANPKGWAFMVSLLPPF.............................................................................................................................................. 139
10 -6.980[P] COG0428 Predicted divalent heavy-metal cations transporter  ali follow..  13  40.........................LGFAAGVMLAASAFSLVAPSLFLIGFVLGGLFVNLADKLPDTKRLKGVWLFIIAITIHNFPEGMAVGVSAFTPQALAIAIAIGVQNEGAAVMASLIPMKYKKGKAFLITFLTGLVEAIGGLLGAGIVSISQ-RLLPYMMAFAAIYVVSVIPETHSKGNELLSTWWIMVGFLVMASL.................................... 240

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Dunbrack RL Jr, Dunker K, Godzik A. Protein structure prediction in biology and medicine. Pac Symp Biocomput. 2000;(12):93-4.