FFAS03 results for COG1963

Query: [S] COG1963 Uncharacterized protein conserved in bacteria, from COG1018

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 .`
#	Score	Template	Links and tools	%id	First	`MELLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEKQKKLKELLGHQPIEVFFGGLTGILLTLVLAYFFM`	Last
1	-88.000	`[S] COG1963 Uncharacterized protein conserved in bacteria`	`ali follow..`	100	1	`MELLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDFNRFVNEAKDFPKAAEKEKQKKLKELLGHQPIEVFFGGLTGILLTLVLAYFFM`	158
2	-21.000	`[I] KOG3146 Dolichyl pyrophosphate phosphatase and related acid phosphatases`	`ali follow..`	17	58	`.......FGIGLVISQFINEFIKTSVEQARPETCTLLEACDSHGWPSSHSQFMFFFATYFSLGLRSRWIMNLLHWSLAVVTMYS----RVYLG----------------------------------------HTVAQVFAGAALGGIVGASWFWVV.`	174
3	-20.000	`[S] KOG4268 Uncharacterized conserved protein containing PAP2 domain`	`ali follow..`	19	78	`.......LLLALLLDIMTVAGVQKLIKRRGSPSLLDYLTMDIYAFPAGHASRAAMVSKFFLSHLVLAVPLRVLLVLWALCVGLS----RVMIGR---------------------------------------HHVTDVLSGFVIGYLQFRLVELVWM`	189
4	-14.300	`[I] KOG2822 Sphingoid base-phosphate phosphatase`	`ali follow..`	16	104	`.......MTLLIAFCDYLGNCIKDVVSAPRPSCPPVRRITAT-GLPSSHTLNTVCLSGYLLHSVSIQYYGFALACLLVALIAFG----RVYLGM---------------------------------------HSVVDIVSGLAIGVLILGLWLTVN.`	228
5	-14.100	`[R] COG3907 PAP2 (acid phosphatase) superfamily protein`	`ali follow..`	11	135	`.......TALLFGLGPLVIGILKATSAHSCPWD-----LVEYGGFPGGHASSGFAVMALFFLRPRLAMLCWFAGIGLGMLMGF----GQIMRG---------------------------------------AHFLTHNLWAGWWVWLSQLAAFWII.`	260
6	-13.400	`[I] COG0671 Membrane-associated phospholipid phosphatase`	`ali follow..`	12	119	`.......VFATLGILLVIDQVLKPFFN--RTRPLPRLVDVDGRSFPSGHAAGGVVFYFYLAFLLAAHFPQYRWQIYLGATLWVGFIGIAS----------------------------------------YCRHWATDILAGYGVGFIWLTLSLFLL.`	228
7	-12.900	`[I] KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family`	`ali follow..`	16	106	`.......FLFGAAASQSLTDIAKYSIGRLRPHFLDVAERVKEGSFYSGHSSFSMYCMLFVALYKGDWARLLRPTLQFGLVAVSIYVGLSRVSDYK--------------------------------------HHWSDVLTGLIQGALVAILVAVYVS`	248
8	-9.130	`[T] KOG2290 Rhomboid family proteins`	`ali follow..`	12	655	`.RLWLSLFLHAGILHCLVSICFQMTVLRDLEKWHRIAIIYLLSGVTGN---LASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLF-----------------------DNFAH-----ISGFISGLFLSFAF.....`	786
9	-7.160	`[T] KOG2289 Rhomboid family proteins`	`ali follow..`	17	112	`.RLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFRVGLIYLISGLGGS---ILSSLFLQESISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPR----------------DNFAH-----IGGFLTGFCLGFVL.....`	243
10	-6.900	`[S] COG4575 Uncharacterized conserved protein`	`ali follow..`	11	14	`.............................................................LLAEFQALVADTEKLLQSTADVAGDQAEEIRGKIHDSLKRARDTLRDTKDSLKDNVRERSQAAVDATEVYVGEHPWQSIVGFLLGLLVS........`	107

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

Comments and questions to: webmaster