FFAS03 results for COG2311

Query: [S] COG2311 Predicted membrane protein, from COG1018

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . 240 . 250 . 260 . 270 . 280 . 290 . 300 . 310 . 320 . 330 . 340 . 350 . 360 . 370 . 380 .
#	Score	Template	Links and tools	%id	First	`MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR`	Last
1	-124.000	`[S] COG2311 Predicted membrane protein`	`ali follow..`	100	1	`MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR`	385
2	-34.400	`[S] COG3503 Predicted membrane protein`	`ali follow..`	12	9	`.SRLHSIDALRGLVMLFMLLDHVRETFFLHRQVGDPMDVASTEPALFLSRTLAHLCA-----PVFVFLTGLSAFLYGEKHQAFLFKRGLFLVALELTLVNFAWT-QVIWAIGLSMLALAALLWLPRPLLAALGVLLVAGHNLLDPLHFAPGSAWHLPWAVLHDRGWIEAGDALRLRTSY----------------------LLPWIGVIALGYAAGN--WFSGATPATTRRRYLLAGGGGLLLGFILLRLLNGYGEKPWAFGETPAITLMGFFNLALTLGIGLLLLAWFERLDWSGRGKALVAFGGAPMFFYLLHLYLLKLLYLLALYFGFSSVPALWLCSILLAVALYPAVHWFAGFKARRRDIAWLKYF..............`	384
3	-20.700	`[S] KOG4683 Uncharacterized conserved protein`	`ali follow..`	11	35	`.PRLASLDIFRGLTVALMILVD---DAGGDWPMIAHAPWNGCNLADFV-------------MPFFLFIVGVSIALSLKRISNRTCKLLFWGLLLQGG-TMMRFCG-IALSYLVVALVEIFTKDSHEENLSTGRIVAASVLVIYLATLYGTYVPDWEFVVYDKDSVLYGKILSVSCGVRGKLNPPCNAVGYVDRQVLGIILSSISAILSTIIGVHFGH--IILHLKGHSARLKHWISTGLVLLALGLTLHFTHLMPLNKQLYSFSYICVTSGAAALVFSSLY-----SLVDILEWKHMFLPLKWIGMNAMLVYVMGAEGILAAFF---LHVFIRVWHSRRVGVLMYVIFAEILFWGLVTG------VFHRFKIYWKL.........`	455
4	-19.800	`[S] COG3274 Uncharacterized protein conserved in bacteria`	`ali follow..`	13	3	`.NKIDWIDNLRAVACIMVVMIHSTTYYVTRGAQVGELNWDIANVLNSASRACV---------PLFFMISGYLFFGEKSAQKKHFMRIGLCLLFYSVIALIYLWF--IIVVYLVSPLIKVKPVSGRYLAILILLLAVVANPQTSKFSLDDFRLLPAN---------------------------------------LYIYGDTFYYLLYALLGRAMGML-----ETQGRMISWGAALLFVVSVICIAISTEKQTRI------NGSFADTFYMYCSPLVFIAAVSLWVWFKNCL--NQHIAWLSGLARHSLAIYGFHALIIHFIRTHHYDFTAYPVLDILYVFALTLGLSTLLS.................................`	317
5	-18.400	`[S] COG4299 Uncharacterized conserved protein`	`ali follow..`	11	6	`.ARFLSLDVFRGLTVFLMIVVNTAGPGAKAYSQLVHAPWFGFTAADAV-------------FPSFLFAVGCSMAFAFSKPIPRAALIFLLGFLMYWFPFVRTRVMGVLQRIALCYLLAAFAVRWLSPRLIVALCAVLLLGYWAILMAFGDPAAPLSKLGNAGTRLDLLL------------IGQNHLYRKDGGFDPEGLLGTLPSTVNVLAGYLAAR--FLKENPGSSQAMGRMAIAGLVLILAGLVWSPLF-------PIAKKLWTSSFVLLTVGIDLILLAGLAKLLEGKASNPGTYFFQVFGLNPLVLYLFSELFVVVLWVGVNLFQAVMPGAFGSLLCALAYTLVCWLLGY----------VMARRGVVVKL.........`	372
6	-17.900	`[S] COG4763 Predicted membrane protein`	`ali follow..`	10	3	`.QKELWINQIKGLCICLVVIYHSVITFYPHMTTFQHPLSEVLSKCWIYFNLYLAPF-----MPVFFFISGYLIRRYIDSVDKRIWNIFWVLALWGVVQWLALW---YLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNFVPTP--------------------------------------------------WWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLAALAVG--------------------AWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPVAVSYSR....`	357
7	-17.700	`[S] COG4645 Uncharacterized protein conserved in bacteria`	`ali follow..`	11	22	`.GRDTRLDVFRALCLLTIFVNHVPGQYLEYLTHKNFGFSDSAEA--------------------FVLISGLSVGAAYSGLTLKIWRRALALYVAHIMTSVVT---NILSMYAVLFLLFLWLNAVRPRLLFAFSATLWLAAGCFKM----------------------VPYNFLDDGYWFLNPWSWQF--------------------LFVIGILCMSHVRRGGSLPRSPWLLGISVAYLAISAFWVLFSWWNIDLSFGLPAVLTGFDKTFL----VLALAYILATVPVFSRLTRVGSNHPLVMIGRHSLAVFIFGTILAMAGQVLLLVTDRDRIIGTIFVIGGIGLHFAY...................................`	366
8	-17.300	`[G] COG3594 Fucose 4-O-acetylase and related acetyltransferases`	`ali follow..`	10	21	`.NRDLSFDFAKGILITLVIIGHLLQYLI-------------YQGTDAFWLSPYFKSIYMFHMPLFMAISGYLSSGAILRKGERAMQLLLPMLFWCTLIWTLYW---FIWAAFISFILIRVLTTFNRLSIWIISASAIAVAFAPITL--------------------------------------------------SITPLLKYTYPFYCLGFLFAQPIGWQNGVIWRYKWIFVVLLSIAAFICFLGWGKETYAYNIHDEQSAKQVFLMFSGSLAASAVAMQSMFQCWRLVYSTRVARFVAVQLGQSTLLLYLVQGAVFRLMQFGEVWNLTTRITFATVLGVAIVVIAMAIRSIYVSRIVVG.......................`	358
9	-15.400	`[G] COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation`	`ali follow..`	15	46	`..SKKSTDCIKGLSILVIILHHISLRMQPVGFMGIYTCLGHLA------------------VSMFLFFSGYGLMVSKLKKKGFFSKRLSKVYLPFVIINAITWF--ILVFYLCFYVCFKFLSTNLAQHILLFLTFVYFFAMIFMGFREW----------------------------------------------------WYNTAFCFPLGVYAAINYDALTKFLEKHYVKTLIIALIAFTFFFFLAHMLPSAIMP-----------------YQTIASIIFVYLVLLFLFKFRLSSKPLLFLGNIAYEIYLVHMKILVAFFSFIGARGSYIVYLYLILVIIVFCFNKLFNLNKNKKVKLT.......................`	356
10	-11.900	`[R] KOG3700 Predicted acyltransferase`	`ali follow..`	9	267	`.GQVTSLNCIRTISTVWVILGHCAAMLILICTNPVDLLDFTKTYMGALL--VNAYFAVDTFFFISAFLLSFLWFKQLQKQRKRIARLSPAYYIAILFVTFVYYWLNLLYIYLMSPILLLSFAIGGAVFGLFASVVALVASTAFNAYQIFFWYFPPTDYPLGPKDPRYNENERRYDVWNYYNPLIR--------------------CQIYIMGLVLG---FMRKVPKININPWVDRIMWVLSLGSMVFVVLVIQDYSSGDGWTPVQTALYRSYSKTALAKLILESVSEQVFKIIIQNKKNIFTPLARLSFCAYLVHWMVLGYFFGRNHSELYFSTLSYFFLVIPVTALSFVIAIFWSSMFEI-PFAKIEGLLLGRSGTPKANGNLP`	746

FFAS is supported by the NIH grant R01-GM087218-01

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