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Query: IDP04391 gene: cotJB; spore coat protein CotJB [Clostridium perfringens ATCC 13124] CPF_1067 [Clostridium perfringens ATCC 13124], from CSGID

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst MKALELLDDIQKLQFYAVELNLYLDNFPENRKATEDYKEISSKLSELIERFECEYGPIRNFGQAYVENPVAWIEQPWPWEIRYLast
1 -6.480[R] KOG3234 Acetyltransferase, (GNAT) family  ali follow..  12  88...KKLMNLLEDISDKIDKAYVDLFVRASNTPAIKMYEKLGYIIYRRVLRY................................ 136
2 -6.220[K] COG0789 Predicted transcriptional regulators  ali follow..  21  44LNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRD....................... 103
3 -6.170[R] KOG4234 TPR repeat-containing protein  ali follow..  16  184VRRAEAHEKLEHFEDAVTDLKKILELDPSNDQARKGIRRLEPLAAEKREKMKEEA............................ 238
4 -6.110[O] KOG0543 FKBP-type peptidyl-prolyl cis-trans isomerase  ali follow..  309FRRGEAHLAVNDFELAWADFQKVLQLYPNNKAALAVCQQRIHRQLARKKFYAKMFERLAEEENKAKAEA.............. 380
5 -5.870[C] KOG4576 Sulfite oxidase, heme-binding component  ali follow..  11  51................VFDVTEFVDLHPGGPSKL................................................. 68
6 -5.860[C] KOG4516 NADH:ubiquinone oxidoreductase, NDUFC2/B14.5B subunit  ali follow..  83.....AAGALRERHYQTRDAVIYMKLHPED------FDHFNDRSGRSFSQVLLPWYPRRTQ...................... 134
7 -5.860[TK] COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain  ali follow..  12  47.SVEEGIAAVKTSAPAY----AVVDMRLGDGNGLNIIEAIRSRRADTRAIVLTGYGNIATAVNAVKLGAIDYLSKPADAD... 121
8 -5.550[O] COG4745 Predicted membrane-bound mannosyltransferase  ali follow..  16  421..................PLVQYAQPGGTMQPTIDDIQRAATATSGLDVLYYGDSNDTADDGLEFSDAG-GWHDRPFPW.... 493
9 -5.500[M] KOG3364 Membrane protein involved in organellar division  ali follow..  89........KLGEYSMAKRYVDTLFEHERNNKQVGALKSMVEDKIQK..................................... 126
10 -5.440[V] KOG1629 Bax-mediated apoptosis inhibitor TEGT/BI-1  ali follow..  195VDTQMITEHHGDMDYVQHSFTFFTDFASLFVQILVLNMFRKMKKGRKDRR................................. 246

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sikora S, Godzik A. Combination of multiple alignment analysis and surface mapping paves a way for a detailed pathway reconstruction--the case of VHL (von Hippel-Lindau) protein and angiogenesis regulatory pathway. Protein Sci. 2004 Mar;13(3):786-96. Epub 2004 Feb 06.