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Query: IDP90410 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_663 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in COG1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MLEKLIKNFVAYMGVASELEFDADGSYVFPISSLVRMRVRQNADEEIIISAFLGEIPASMDIEKAYARMMEGNLFGQETGGAALGLDSDGHAVLVRRVPGEVSQEDFASYIESVLNYAEAWLEDLGLSKTEQELast
1 -11.400[S] COG5465 Uncharacterized conserved protein  ali follow..  10  36...DVIEQVAHSNDWT--FERTGDDEIAISVAGNHISFSWMEDFEALHLACAFDIKVAEPRVNEVMRLLSLIN---EKLLMGHFDLWQQEGAIMYRQSLVEPTSRQVEVLLSAALEACEAYFQAFQFVVWSGV 169
2 -7.890[S] COG3789 Uncharacterized protein conserved in bacteria  ali follow..  9  5.PRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLAVLFTSQQIVIETYICPVNTIRDTAEFNLFLLRNQKVLPLSSVGITQVKQEEYYVAFGALSLNSSLADVMLEITTLVENALDIAEITQVYSQE.. 134
3 -7.230[S] COG4687 Uncharacterized protein conserved in bacteria  ali follow..  7  1MAQSLNTKADYSTEGIAYLGFAEYGKILI--DVAFEFYNDRNVEKNMTFWTAVARVEGDVSKSLKGEVKVGRQFSIVLQNGSKVRFSSKNSGTVLKWIRHYLGNDKVVKSPSFLGTFKNAFKRKKKK...... 127
4 -6.540[S] COG5440 Uncharacterized conserved protein  ali follow..  14  1MSQEMIKKWLDEEGFLRMEVPDENARFHYVVN-VIDIIQPAGKDDMILIACATSVSPESMEKRTEFIWKVRFTLNRFGVDFQLDHPENVLNSYLVTDEIDGLSKDRLISSIKNVFRAKLQVMWMIQERFGEER 147
5 -6.470[V] COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes  ali follow..  8  56.FEDYLFVLLAGLGYNETYQTKKSR------DFGADLLFNDSSGARTVVQAK-----SDALGVKAIQEVFTAKVYYQAEKAIVITISDPCRRLASAAEVKLIEREALQEIIALFKREQMKQAQDVIEAPPE.. 180
6 -4.550[J] COG1490 D-Tyr-tRNAtyr deacylase  ali follow..  12  11..........................AKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEKDARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFQAAPAEQAQQLYLRTAELLRGHGIHVET...... 126
7 -4.410[R] COG0824 Predicted thioesterase  ali follow..  7  28ICHEGYEASLRTSGISLKEFFTNPSMAFPIVHASVDFLRPLFCGAQVIISLVPQKI--GAEKFEINYEIYLADVLVAKAVTRHVCIDANTRSKQ---------SMEIIQWLDGYRKDTEEVER.......... 141
8 -4.370[G] COG2814 Arabinose efflux permease  ali follow..  13  45LPVSLLTPMARDLQVTEGMTGQGIAISGAFA---------------VLTSLFISALAGSLNR----KTLLLGLTLAMGVSGAIVALAPNYAIYMLGRALIGVVVGGFWSMSAATAIRM............... 143
9 -4.350[R] COG4888 Uncharacterized Zn ribbon-containing protein  ali follow..  4  1....................................................MGGKRRKRTKIIRVKPKLPKTFECPRCGKVSVSVKIKDNIATITCGSCGLYTEVEVPPVFDEANAYSKFIDMYLEGRLQIK 81
10 -4.250[R] COG2514 Predicted ring-cleavage extradiol dioxygenase  ali follow..  8  180.LKEAKAFYTDVLGFDIVGNYAGMSALFVSAGGY---NAPPKPTNASGLDYYTVVLPHQEELDLVANRVKHAGYSIEETENSFRVKDPVSGAYIT...................................... 282
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;