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Query: IDP00140 pyrroline-5-carboxylate reductase, putative BA_0197 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLTKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLRARYNVSTTTDWKQHVTSVDTIVLAMPPSAHEELLAELSPLLSNQLVVTVAAGISPSYLEERLPGGTPVAWIMPNTAAEIGKSISLYTMGQFVNETHQETLQLLLRGIGTSQLCTEEEVHQLTAVTGSAPAFLYYFAESLIEATKSYGVDEATAKHLVIQMISGSASMLEQTQDPANLREQVTTPGGSTAEGLKALYLast
1 -100.000IDP00140 pyrroline-5-carboxylate reductase, putative BA_0197 [Bacillus anthracis str. Ames]  ali  100  1MLTKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLRARYNVSTTTDWKQHVTSVDTIVLAMPPSAHEELLAELSPLLSNQLVVTVAAGISPSYLEERLPGGTPVAWIMPNTAAEIGKSISLYTMGQFVNETHQETLQLLLRGIGTSQLCTEEEVHQLTAVTGSAPAFLYYFAESLIEATKSYGVDEATAKHLVIQMISGSASMLEQTQDPANLREQVTTPGGSTAEGLKALY 245
2 -86.400IDP02179 gene: proC; pyrroline-5-carboxylate reductase [Coxiella burnetii RSA 493] CBU_2090 [Coxiella burnetii RSA 493]  ali follow..  30  1.MNTSNITFIGGGNMARNIVVGLIANG-YDPNRICVTNR-SLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILTKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWVSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMAETEQSVVQLRQFVTSPGGTTEQAIKVL. 245
3 -85.500IDP02492 gene: proC; pyrroline-5-carboxylate reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT1559c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  29  1....MKICFIGGGNMAAAMIAGMTSHG-YKSQDIIVFDR-NEHKCLNLIKKYNINTSTSLLNTIKLADVLILAIKPQNMFELIKNIRDTVSTQVIVTVAAGIQTSAYEELFNKEISFARTIPNTPSSLGYGATGIFFNKVIAADKKDLVIDIMQTMGVVTVVDEKEIDIVAAIASSGPAYYFQFMEHMVEAAIKQGLDKKQAEKLVVQTCLGAAQMANTNENMSELRKNVTSKKGITYEALNIF. 241
4 -29.500IDP90565 ketol-acid reductoisomerase [Vibrio cholerae O1 biovar eltor str. N16961] VC0162 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  34YLKGKKVVIVGCGAQGLNQGLNMRDSGLDVSYALRQAAIDEQRQSFKNAKNNGFNVG-SYEQLIPTADLVINLTPDKQHTSVVNAVMPLMKQGAALGYSHGFNIVEEGMQIRKDITVVMVAPKCPGTEGFGVPAVHPENDPQGEGWEIAKAWAAATGGHSSFVAEVKSDLMGEQTILCGMLQAGSIVCYEKMVADGIDPGYAGKLLQFGWETITEALFGGITHMMDRLSNPAKIKAFELSEELK. 293
5 -16.500IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  15LIKSKKVAIIGFGSQGHAHAMNLRDNGV----NVTIGLREGSVSAVKAKNA----EVVSVSEASKIADVIMILAPDEIQADIFNVIKPNLSEGKAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGH-GGGTPCLIA-QDESKNAKNLALSYASAIGGGTTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEAGYEPEMAYFECLHEMKLIVDLIYQ.......................... 242
6 -15.400IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  14VLKEKKVAIIGYGSQGHAHAQNLRDNGF----DVVVGLRKGKSWDKAKEDGFSV---YTVAEAAKQADVVMILLPDELQPEVYEEIAPNLQAGNSLVFAHGFNVHFDQVKPPVNVDVFLVAPKGPGSEGGAVPAFAVYQDATGVATEKALSYADGIGATRAFKEETETDLFGEQAVLCGGVTALVKAGFETLVDAGYQPELAYFECLHELKLIVDLMYEG......................... 241
7 -13.900IDP02524 gene: ilvC-2; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1852 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  13LLQGKTVAVIGYGSQGHAQAQNLRDSGV----EVVVGVRPGKSFEVAKADGFEV---MSVSEAVRTAQVVQMLLPDEQQAHVYAEVEENLREGQMLLFSHGFNIHFGQINPPSYVDVAMVAPKSPGQEGNGVPAVAVHQDATGTALHVALAYAKGVGCTTTFQEETETDLFGEQAVLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELKLIVDLMYEG......................... 240
8 -12.900IDP05722 gene: tyrA; prephenate dehydrogenase [Bacillus anthracis str. Ames] BA_2954 [Bacillus anthracis str. Ames]  ali follow..  16  15....KKVVLIGTGLIGGSLALAIKKDHDV---TITGYDIFQEQVERAKELHVVDEIAVDLQHACEEAHLIVFASPVEETKKLLHKLASFLREDVIVTDVGSTKMNEAEALFSKEISFIGGHPAKAHLFENAFYILTPMHHVPNEHVEELKDWLKGTGHFLVLNTEEHDYVTGIVSHFP---HLIAAGLVKQVEKHAGDNPLIHQLAAGGFKDITRIASS--SPKMWSDIVKQNREHLMVLLKEW. 262
9 -12.500IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  16  1....MKIGWIGLGAMGTPMATRLRDAGL----EVSVYNRTESKAAPLKEK--GVAVYTSPIDLAAKVDLVFTMLSKAAIDAVLAPKFWEQMSKKIVSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVLAHLGSQTF---------LGKVGQGTGLLAQMGVAYSEAAKRLGVDAESFLQIIGQSGMNSPLF............................. 212
10 -12.100IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali follow..  15  5...KHPIAILGAGSWGTALALVLARKGQ-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDKTRIAWGTKGLAKGSVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDD----MIGVELCGSVKNILAIATGISDGLKLGSNARAAL-----ITRGLTEMGRLVSVFGGKQETLTGLAG.......... 242
11 -11.700IDP92023 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_010260 [Toxoplasma gondii ME49]  ali follow..  12  13QSGPLKVSVVGSGNWGSVIAKIVALNAQKSYVDIINKTHENRKYLPGHKLPENLVALPDVVEACRDSDLLIFIMPHQFATKVCEQLAEARGHARAITLLKGLHVENFKTKLDIVDCCVLSGANVANDVAREAEATIGYSPEETDAALIWQQLFDTPYFKVNALPD----VAGVQVCGAVKNVIAIAAGFCDGLGLGIRLGVEEMKQFAMIFFDNIMAETFFDSAGYADVITT............. 281
12 -11.400IDP92082 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_107570 [Toxoplasma gondii ME49]  ali follow..  14  19QKGPLRVAVIGSGNWGSVIGKICAQNAERSYVDIINQKHENVKYLPGHKLPDNLVAVPDVVEACRGADLLVFVMPHQFVAKVCDQLAKA-SHARAISLLKGLYVEGIRSKLNIVECAALSGANVANDVAREAEATIGHSPDETDTALIWQQLFDKPYFKVNTLPD----VAGVQLCGAVKNVVALAAGFCDGLGLGIRLGVEEMKQFGMIFFDNVIAETFFDSAGYADVITT............. 287
13 -11.200IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  2...QKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYRLKAIQDWQANIIEFDSILVATPSSGFKNTILELKECIPQQNIISATKGFCHDSAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINYARYVQELFSNENFRCYTTTD----IIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAAL-----ITRGLAEIKKLGLKLGANSETFIGLSCL......... 242
14 -11.100IDP02668 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1526 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  2....TKITVVGAGSWGTALAMVLADNGH-ELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNVVLIVVPTKAYREVLQDMKKYVGPTTWIHASKGIEPGTIEEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDG---LGLGDNAKAALMTR---GLTEIARLGRKMGGNPLTFAGLTG.......... 242
15 -10.500IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  1....MNIVVLGPGAVGSLWALHLHSAGH---QVALWSRQAQPTITLQLDEEAPISFRNQNLDTLIHADLLLITVKAWQVEAALQPLLPHLRETILLFMHNGMAVEAISESLTHFPVLFATTLNQVSHTGFGQTQVGPFNA-LGARCDFIADVFNHALAPVTWNPEIINPLTAIHQC--PIITAILDEVTAVMQAEAISRDGVYQVIQATAANLSSMHQD.......................... 249
16 -10.400IDP91227 gene: tyrA; T-protein [Escherichia coli CFT073] NT04EC3201 [Escherichia coli CFT073]  ali follow..  11  100....PVVIVGGGGQMGRLFEKMLTLSGYQ-------------------VRILEQHDWDRAADIVSDAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHP--PDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGRLHRISAVEHDQNMAFIQALRHFAFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQD---PQLYADIIMSSERNLALIKRY. 320
17 -10.100IDP05340 putative oxidoreductase [Clostridium difficile 630] CD3450 [Peptoclostridium difficile 630]  ali follow..  12  1.MKNIKMGMIGLGSIAQKAYLPILTK--SERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEIIKILLNYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYKEIKNNATEIVSINICKHGLNSLRNVRFDSTLIDDYIHVIDTALWLANE--------VEISGEDLFLTDNKNLIFVSHKLKGKNFSINTSMHRDSGTKLEQEILSKGKIQR....... 234
18 -10.000IDP00126 gene: mviM; putative virulence protein NT01ST1449 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  13  1.MRTLRIGIVGLGGIAQKAWLPVLTN--TAGWTLQGAWSPSRDKALRICESWRIPYVDSLANLASSCDAVFVHSSTASHYAVVSE-----------LLNAGVHVKPLAENLRDAERLVALAAQKKLTLMVG.................................................................................................................. 120
19 -9.920IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]  ali follow..  12  1.MTKANFGVVGMAVMGRNLALNIESRGY----TVAIYNRSKEEDVIACHPEKNFVPSYDVESFVNSIEKPRRIM--PGTDATIQALLPHLDKGDILIDGGNTFYKDTIRRNEELAN--SGINFIGTGVSGGEKGALEGPSIQKEAYELVADVLEEISAKAPEDGKPCVTYIGPDGAG-GDMQLIAESYDLMQHLLGLSAEDMAEIFTEWNKGELDSYLIEITADILSRK................ 243
20 -9.620IDP00461 gene: tyrA; bifunctional chorismate mutase/prephenate dehydrogenase YPO3285 [Yersinia pestis CO92]  ali follow..  11  100....PVVIIGGQGQMGRLFSRMLNLSGYQ-------------------VRTLEQEDWSQAESILADAGMVIVSVPIHITEEVINRLPKLPADCILLDLASVKNKPLQAMLAAHEGPVLGLHP--PDVGSLAKQVVVYCDGRDPQAYQWLLEQLQVWGRLHRISAVEHDQNMAFIQALRHFAFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQD---PQLYADIIMSSEDNLALIKRY. 320
21 -9.150IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  1.MENLQIGVVGVGVMGKSLALNFESKGY----SVALYDISKEDETIEENRGKNLVGTHIVEEFVNSLESPRKIL--EITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAE--EGINFIGAGVSGGEEGALKGPSIQKDAYEKVKDMLENISAKVNNEP----CCSYIGPNGAGHYVKMVHNGIEYGDMQLICE.............................................. 198
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.