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Query: IDP00191 conserved hypothetical protein YPO0932 [Yersinia pestis CO92], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSTLRIPIALQQAVMQCLRHYLQLANQHLGTAYPEPKVNYHQRGTNAGSAYLQSFEIRLNPVLLLENKQPFIDEVVPHELAHLLVYRQFGRVAPHGKEWRWMMEQVLKVPASRTHQFEVASVRSKTFNYQCKCQQHSLTIRRHNKVLRGESEYRCRQCGEKLQFITINPDLast
1 -91.200IDP00191 conserved hypothetical protein YPO0932 [Yersinia pestis CO92]  ali  100  1MSTLRIPIALQQAVMQCLRHYLQLANQHLGTAYPEPKVNYHQRGTNAGSAYLQSFEIRLNPVLLLENKQPFIDEVVPHELAHLLVYRQFGRVAPHGKEWRWMMEQVLKVPASRTHQFEVASVRSKTFNYQCKCQQHSLTIRRHNKVLRGESEYRCRQCGEKLQFITINPD 170
2 -14.700IDP05689 putative cellsurface protein [Listeria monocytogenes EGD-e] lmo1654 [Listeria monocytogenes EGD-e]  ali follow..  11  47......NSKYMSFIQSGANTWNAYKKGVIGANKSDVYCSDISANNNINATTYSNGKITFNKKNMDKKNNAGKQNVATHELGHGL---------GHNASSDVMYQYSTSKTTLSTNDKQSYDAAYKKY........................................... 164
3 -13.200IDP00206 putative heat shock protein YPO1706 [Yersinia pestis CO92]  ali follow..  14  61SVGGEVIERPRNETEYWLLETVRRQSQQVGIAMPQVAIYQAPDINATGA-RRDASLVAVSTGLLQNMSRDEAEAVIAHEISHVA...................................................................................... 145
4 -12.800IDP02151 hypothetical protein GBAA3159 [Bacillus anthracis str. `Ames Ancestor`] GBAA3159 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  51......SSIIKSGWQAADSAWYTASRINFTVSASSVNTL-ESSSTYYGRMKTSKFAGDINAGNTNITKSNVAKSTGVHEFGHAI---------GHNSG-TSIMNSNRNRTTMHVPQTDDKNGVNAIY........................................... 175
5 -12.200IDP91935 heat shock protein HtpX [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100001517 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13  69NGAREVDEQTAPDLYHVVEDMALVA----QIPMPRIFIIDDPALNATGS-NPQNAAVAATSGLLAIMNREELEAVMGHEVSHIR...................................................................................... 149
6 -11.500IDP91379 Zn-dependent protease with chaperone function [Vibrio vulnificus CMCP6] VV1_1473 [Vibrio vulnificus CMCP6]  ali follow..  19  142LDLQLQPSQLPEEQQSAIRQRVQQFAQVLPELPYDIKVEFRSMPEGANAFALPGGTIVLLDELVALQTQQQLDSIILHEMGHVH--------HRHMM--KQVVHSTI............................................................... 239
7 -11.400IDP00182 M48 peptidase family protein YPO0398 [Yersinia pestis CO92]  ali follow..  17  148FKPSALPAERQEAIQQLFLQVMPPQMRQERTPL---KLVLMTAPTTANAFMLPDGTMVISDDLIKLTSDDALAAVMLHEMGHH--------AHRHSMQ........................................................................ 235
8 -11.300IDP00190 putative lipoprotein YPO0927 [Yersinia pestis CO92]  ali follow..  17  67...............SQYGKRMAKIAAALGDNINGTPANYKVVTKDVNAWAMANGCIRVYSGLMDMMTDNEVEGVVGHEMGHVAL--------GHTRK........................................................................ 142
9 -10.900IDP01749 putative iron-binding protein [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1224 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  11  30VEVVSDRSVSKNEVKELLAEFFNYMKDHFNDE------KYMQLIGYPNLEEHRKIHKEIIQTMINLIKDIKSTNDLKEKLYIVAKKWLLEHILYEDMKVEKWRSSSLSTDDGGDVSFEAAEDEDNEYLYTCNCPGHDVPYSIHQKIELQGRKFTCKTCKQAIKFYKK... 197
10 -9.980IDP02340 hypothetical protein GBAA2884 [Bacillus anthracis str. `Ames Ancestor`] GBAA2884 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  64.......RIIAESLPIIIQEVTNAYHNKFNFDVKMKFHLFVGGFGSNAFVEREIIGDMFFAAEKLSPDLNHLRVIVAHEIGHIYHNVMLQN............................................................................... 147
11 -9.900IDP00211 hypothetical phage protein YPO2101 [Yersinia pestis CO92]  ali follow..  14  30......ATEVLEWVNSQILSDDGELHNPDHGHLIDADIKIKQGRTVLGQAEQVAMRITLAADYCAQCSDLEFCALIEHELYHISHATDEFGAPKFNKEGQPVLK--------RGHDIEEFVGVVRRYGASVEVQEMIDAANKPAEVAHLNVARACGTCLLKLA....... 211
12 -9.590IDP04077 gene: pepN; aminopeptidase N [Francisella tularensis subsp. tularensis SCHU S4] FTT1793c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  16  222IYAFKQDIDKCHYAMQAVKDSMKWDEDRFGLEYDLDTFMI--AMENKGLNIFNTKYIMASNKTATDKDFELVQSVVGHEYFHLTVFRDQEFTSDLNSRDVKRIDDVRIIRSAQSHPIRPESYIEMNNFYTVTVYNKGAEIIRMIHTLLGEEGFQ................ 410
13 -9.300IDP04359 gene: pepN; aminopeptidase N [Yersinia pestis CO92] YPO1414 [Yersinia pestis CO92]  ali follow..  16  219......NLDRADWAMTSLKNSMKWDETRFGLEYDLDIYMI--AMENKGLNVFNSKYVLAKAETATDKDYLNIEAVIGHEYFHLTVFRDQEFSSDLGSRSVNRIENVRVMASPMAHAIRPDKVIEMNNFYTLTVYEKGSEVIRMMHTLLGEQQFQ................ 401
14 -9.300IDP92127 aminopeptidase N, putative [Toxoplasma gondii ME49] TGME49_021310 [Toxoplasma gondii ME49]  ali follow..  18  262VWSTPENVAKLSWALQSIIRAMKGDEILFGRDYDSNVFHI--AMENKGLNIFNCDSLLADPTTTTDEEYRGILRVVAHEYFHLTVYREQEFMGSQYSSGVARVEDARLVSGPLAHPVRPDHYASVDNLYSVTVYKKGAEIFRMYATLLGPSAFR................ 450
15 -9.280IDP02828 hypothetical protein GBAA4243 [Bacillus anthracis str. `Ames Ancestor`] GBAA4243 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  52FSDREISYKDSIQSQEKLASFFQTCVN--EAPECDLYICYFKETAVIACAYSLAKQQQLTGYIVLTNSAAPMKNTLAHEIGHIL...................................................................................... 140
16 -9.250IDP91732 O67990_VIBMI [Vibrio mimicus]  ali follow..  11  331IRSQDLSDRQAARACDVLNAKEEDFHQVVNSGYVPVAFLFNNTTDNGGQYLEGNPAEANNQARFYANGDDLSILNLEHEYTHYLVWWLEGFAEHYKQGYQAAIELIPQGKMSLSDVMATTYSHDSNRIYRWGYLAVRFMMEKHPQDVES..................... 527
17 -9.130IDP05145 hypothetical protein BAS4679 [Bacillus anthracis str. Sterne] BAS4679 [Bacillus anthracis str. Sterne]  ali follow..  11  120......QRQDRGYHEDLWDMYRTLIPAKYRGNITEFDLITDGYDGVVAHVM-KDWTLSLDTL--SAVNIDEVMKTLIHETAHVLT..................................................................................... 202

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.