Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: IDP00843 hypothetical protein SACOL1859 SACOL1859 [Staphylococcus aureus subsp. aureus COL], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .  650    .  660    .  670    .  680    .  690    .  700    .  710    .  720    .  730    .  740    .  750    .  760    .  770    .  780    .  790    .  800    .  810    .  820    .  830    .  840    .  850    .  860    .  870    .  880    .  890    .  900    .  910    .  920    .  930    .  940    .  950    .  960    .  970    .  980    .  990    . 1000    . 1010    .
# Score Template Links and tools%idFirst MEEGYRLKFIFIGNQNNNIKNKNFSNPHNILFDSKKDIILTQDLCEEFLNLNINKQDHAIELLKKELSPLLFEDSLSYLKEEFINEKLEFNISNLASRYTANNDVDTINNKIIEGISITNNFKYTNISYLKELKGYIENDILDKMKSKYAKNIYLNFKKIFSNLEQSVNNYLELEEEFEEKKKYLSEIYELIDEINIDPYIFLTEHNECNIYKISENEKLELQTYMSKIEKVLLKYQTYLKETCKECLFYPYLLVQGEAGIGKSHLLAHLSKKLRDENHIIYLFLGQFFTKNEDPWHQILNDLEVTNSVDNFLRSISNKAKETKKRAFIIIDALNEGEGKRLWGNYFQSFINHIKKYSNIALIFSIRTPFEDVILPKNAIQDNNIVVFQHEGFSKEENYNPIVSFCDFYGLELPKLPILNPEFNNPLFLKLMCEYCVNKFKEFDQTISVAELFTNVLKTVNINLSKEDKFDFDKNINVVQKVIKGLVELMNDSEFNQLNYEESYTVVNNIAKEYVQKSNRFLEALIDENILIKNTGYKGEMIIYFSYERMGDYFLSEYLLEKYRNVDKRDLVTKLQSDEKVTRYFQKEDDLSYNRGLINELFIKLANEFNIELFEVFPQFKNNYNMIYSFINSLVWRKDGSISKHTKCYISDNVIPYDAFRNNFLDVLLIKMPQKNHPLNIWALHKLLKQCNLGKRDFLWTQYISINNEKVFEIINWLFSNYKKLDEETAEKYMIFLTWIFSATNNKLRDLGTKSLVKLFKTFPTKIIGLLKLFENNNDPYIVERLYASVLGATLRIDICEIHIEIANYIYEEIFDKEMVYPHILMRDYARQTIEYISLSKDISNINLEKIRPPYKSNWYKKEYSNLNIDDYIKSLKNKLDSHLHFSIDKIKNSMTTEYGRGTGAYGDFGRYVFGYAVRNWVKGFKSDQDLSNIALMRIFEMGYDAKLHGEFDMWVNRYDNFNNSIERISKKYQWIAYYEILAKLVDKFPDVQYSGLWDDYIRDIDPTLLLLEIDKLast
1 -203.000IDP00843 hypothetical protein SACOL1859 SACOL1859 [Staphylococcus aureus subsp. aureus COL]  ali  100  1MEEGYRLKFIFIGNQNNNIKNKNFSNPHNILFDSKKDIILTQDLCEEFLNLNINKQDHAIELLKKELSPLLFEDSLSYLKEEFINEKLEFNISNLASRYTANNDVDTINNKIIEGISITNNFKYTNISYLKELKGYIENDILDKMKSKYAKNIYLNFKKIFSNLEQSVNNYLELEEEFEEKKKYLSEIYELIDEINIDPYIFLTEHNECNIYKISENEKLELQTYMSKIEKVLLKYQTYLKETCKECLFYPYLLVQGEAGIGKSHLLAHLSKKLRDENHIIYLFLGQFFTKNEDPWHQILNDLEVTNSVDNFLRSISNKAKETKKRAFIIIDALNEGEGKRLWGNYFQSFINHIKKYSNIALIFSIRTPFEDVILPKNAIQDNNIVVFQHEGFSKEENYNPIVSFCDFYGLELPKLPILNPEFNNPLFLKLMCEYCVNKFKEFDQTISVAELFTNVLKTVNINLSKEDKFDFDKNINVVQKVIKGLVELMNDSEFNQLNYEESYTVVNNIAKEYVQKSNRFLEALIDENILIKNTGYKGEMIIYFSYERMGDYFLSEYLLEKYRNVDKRDLVTKLQSDEKVTRYFQKEDDLSYNRGLINELFIKLANEFNIELFEVFPQFKNNYNMIYSFINSLVWRKDGSISKHTKCYISDNVIPYDAFRNNFLDVLLIKMPQKNHPLNIWALHKLLKQCNLGKRDFLWTQYISINNEKVFEIINWLFSNYKKLDEETAEKYMIFLTWIFSATNNKLRDLGTKSLVKLFKTFPTKIIGLLKLFENNNDPYIVERLYASVLGATLRIDICEIHIEIANYIYEEIFDKEMVYPHILMRDYARQTIEYISLSKDISNINLEKIRPPYKSNWYKKEYSNLNIDDYIKSLKNKLDSHLHFSIDKIKNSMTTEYGRGTGAYGDFGRYVFGYAVRNWVKGFKSDQDLSNIALMRIFEMGYDAKLHGEFDMWVNRYDNFNNSIERISKKYQWIAYYEILAKLVDKFPDVQYSGLWDDYIRDIDPTLLLLEIDK 1016
2 -26.600IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  10  139................................................................................PAIVRRLHSHVENMLDLAWERGFVSQYECDEIRLPIFTPSQRARRLLDLATVKANGLAAFLLQHVQELPVPLALPLEAATCKKYMAKLRTTVSAQSRFLSTYDGAETL--CLEDIYTENVLEVWADVGMAGP--------------PQKSPATLGLEELFSTPGHLNDDADTVLVVGEAGSGKSTLLQRLHLLWAAGQD-VFPFSCRQLQKPLSVRTLLFEHCCWPDVGQE---DIFQLLLDHPDRVLLTFDGFDEFKFR---PTSVQTLLFNLLQLKNARKVVTSRPAAVSAFLRKYI------TEFNLKGFSEQGIELYLRKRHHEPGVALQETSALHGLCHLPVFSWMVSKCHQE-LQEGGSPKTTTDMYLLILQHFLLHATPPDSASQGLGPSLLRG-LGRLALWGLGMCCYVFSAQQLQAA-------------SPDDISLGFLVRAKGVVPGSTAPLEFLHITFQCFFAAFYLALSADVPPALLRHLFNCGRPG---------NSPMARLLPTMCIQASEGKDSSVAALLQKAEPHNLQITAAFLAGLLSREHWGLLAECQTSEKALLRRQACARWCLARSLRKHFHSIPPAAEERLARKAARGLNVGHLKLTFCSVGPTECAALAFVLQHLRRDYNSVGDIGVEQLLPCLG-ALYLRDNNISDRGICKLIECALHC-EQLQKLALFNNKLTDGSMAKLLACRQNFLALRLGNNYITAAGAQVLAEGLRGNTSLQFNRVGDEGAQALAEALGDHQSLRWLSLV....................................................................................................................................................................... 935
3 -17.300IDP91667 POLG_CXB3W [Coxsackievirus B3 (strain Woodruff)]  ali follow..  9 1084............................................................................................................LKQKVSQYYGIPMAERQNNGWLKKFTEMTNAC-------KGMEWIAIKIQKFIEWLKVKILPEVREKHEFLNRLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYASEAKRVFSLEKKMSNYIQFKSKCRCLLLHGSPGAGKSVATNLIGRSLAEKLNSSVYSLPPD----------------------------PDHFDGYKQQAVVIMDDLCQKPDGKDVSLFCQALEEKGILFTSPFVLASTNAGSINAPTVSDSRALARRFHFDMN--------EVISMYSQNGKINMPMSVKTCDEECCPVNFKKCCPLVCGKAIQFIDRRTQVRYLDMLVTEMFREYNHRHSVGATLEASRAFICLQAITTFVSVAGIIYIIYKLFAGFQGAYTGIPNQKPKEFAVAMMKRNSSTVKTEYGEFTMLGIYDRWA---VLPRHAKPGPTILMNDQEVGVLDAKELVDKDGTNLEL---------TLLKLNRNEKFRDIRGFLAKEEVEVNEAVLAINT----SKFPNMYIPVGQVTDYGFLNLGGTPTKRMLMYNFPTRAGQCGGVLMSTGKVLGIHVGGNGHQFSAAL------LKHYFNDEQGEIEFIESSKEAGFPII-----TPSKTKLEPSVFHQVFE--DKEPAVLRN--------GDPRLKVNFEEAIYIGNVNTHVDEYMMEAVDHYAGQLATLDISTEPMKLEDAVYGTLDLTTSAGY-----------PYVALGIK---KRDILSKKTRDLTKLKECMDKYGLNLPMVTYVKDELRSAE------------KVAKGKSRLIEASSLNDSVAMRQT--------FGNLYKTFHLNPGVVTGS-AVG---FW---SKIPVMLDGHLIAFDYS--------GYDASLSPV.... 1967
4 -16.900IDP91668 Q914E0_9ENTO [Echovirus E7]  ali follow..  9 1093............................................................................................................LKQKVSQYYGIPMAERQNNGWLKKFTEMTNAC-------KGMEWIAIKIQKFIEWLKVKILPEVREKHVFLNRLKQLPLLESQIATIEQSAPSQSDQEQLFSNVQYFAHYCRKYAPLYAAEAKRVFSLEKKMSNYIQFKSKCRCLLLHGSPGAGKSVATNLIGRSLAEKLNSSVYSL----PPDPDHFDGYKQQ-------------------------VVIMDDLCQNPDGKDVSLFCQALEEKGILFTSPFVLASTNAGSINAPTVSDSRALARRFHFDMN--------EVISMYSQNGKINMPMSVKTCDEECCPVNFKRCCPLVCGKAIQFIDRRTQVRYLDMLVTEMFREYNHRHSVGATLEALFAFICLQALTTFVSFQGAYTGIPNQKPKVPTLRQAKVQGPAFEFAVAMMKRNSSTVKTEYGEFTMLGIYDKWA---VLPRHAKPGPT-GVLDAKELVDKDGTNLELTLLKLNRNEKFRDIRGFLAKEEVEVNEAVLA------INTSKFPNMYIPVGQVTDYGFLNLGGTPTKRMLMYNFPTRAGQCGGVLMS--------------TGKVLGIHVGGNGHQFSAAL------LKHYFNDEQGEIEFIESSKEAGFPII-----TPSKTKLEPSVFHQVFE--NKEPAVLRN--------SDPRLKANFEEAIYIGNVNTHIDEYMLEAVDHYAGQLATLDISTEPMKLEDAVYGTLDLTTSAGY-----------PYVALGIK---KRDILSKKTKDLTKLKECMDKYGLNLPMVTYVKDELRS-------------EKVAKGKSRLIEASSLNDSVAMRQT--------FGNLYKAFHLNPGIVTGS-AVG---FW---SKIPVMLDGHLIAFDYSG--------YDASLSPV.... 1976
5 -15.300IDP02091 gene: malT; transcriptional regulator MalT [Salmonella typhimurium LT2] STM3515 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  19............................................................................................................................................................................................................................................RERLLAKLSGANNFRLALVTSPAGYGKTTLVSQWAA---GKNELGWYSLDEGDNQQERFASYLIAAIQ-YASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVI-HDAMRFFLRHQ---ENFTLVVLSRNL-------ANLRVRDQLLEIGSQQFNHQEAKQFFDRRLS-SPIEAAESSRMCDDVAGATALQLIALSARQNHTSAHHSANASHLSDYLVDEVLDNVDVSTR-HFLLKSAILRSMNDALIVRVTGEE----------------------NGQMRLEEIERQGLFLQ-RMDDTGEWFSY-HPLFGSFLRQR-------------------------------------------CQWELAAELPEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSE----------------------LALLEESLKALPWESLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNAL----------------RAQVAINDGNPEEAERLAKLALD-AWFYSRIVATSVHGEVLHCKGDLSQSLSLMQQTEQ............................................................................................................................................................................................................ 516
6 -15.000IDP02556 gene: clpB; ClpB protein [Francisella tularensis subsp. tularensis SCHU S4] FTT1769c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  11  32.......................................................AHILKALLEQNDSVAISILSVCGVNIQNFIKAVNDMVDSVAVLSGEGNPQVTPSRDLIATLHKMQGLANKNGDEFISSEVFLLASLEDKSLTGLYNKFGITKEKLTKAVNDYRGGEKVSSQNQEDMKGALDKYTVDLTDLARK-------------------------GKIDPIIGRDSEIRRTIQVLQRRTKNNP--VLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLD---MGALLAGAKFRGDFEERLKSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMGNMLKPALARGELKCVATTLDEYREYV----------------------EKDPALERRFQKVLVDEPTVEDTIAILRG---LKERYELHHGVNITDSAIVSAATLSHRYIT----------------DRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMAELQYGKIPELEAQIKQIEETEAEPS----------------------------------ENKLVRTSVTENEIADVVSKATGIPVSKMMEGEKDKLL------NMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNR-----IGSFMFLGPTGVGKTELTKALAEFLFDDEDAMLRV--DMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADIFNILLQVLDDGRLTD------------------------------------------------------------GQGRTVDFKNTVIVMTSN--EMQGQDYETVKSAVMEMVLSH-FRPEFVNRVDDAIVFEPLNKEMITEIAK----IQIKRLEKRLADLSIGLEVTTGAMDKLADFDPVFGARPLKR 820
7 -14.300IDP00663 gene: clpB; ATP-dependent Clp protease, ATP-binding subunit ClpB SACOL0979 [Staphylococcus aureus subsp. aureus COL]  ali follow..  10  32.......................................................EAILSAALNESESLYKSILERANIEVDQLNKAYEDKLNTYASVEGDNIQYGQYISQQANQLITKAESYMKEYED-EYISMEHILRSAMDIDQTTKHYINNKVEVIKEIIKKVRGGNHVTSQNPEVNYEALAKYGRDLVEEVRQ-------------------------GKMDPVIGRDEEIRNTIRILSRKTKNNP--VLIGEPGVGKTAIVEGLAQRIVKKDVPESLLDKTVFELD---LSALVAGAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMGNMLKPMLARGELHCIATTLNEYREYI----------------------EKDSALERRFQKVAVSEPDVEDTISILRG---LKERYEVYHGVRIQDRALVAAAELSDRYIT----------------DRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIEESALKNE--------------------------SDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVV-----TDEEIGDIVSQWTGIPVSKLVETEREKLL------HLSDILHKRVVGQDKAVDLVSDAVVRARAGIKDPNRPIGSFLFL----GPTGVGKTELAKSLAASLFDSEKHMIRI--DMSEYMEKHAVSRLIGAPPGYIGHDEGGQLTEAVRRNPYSVILLDEVEKAHTDVFNVLLQILDEGRLTD------------------------------------------------------------SKGRSVDFKNTIIQVLLENVKETGEITESTEKAVMTSLNAY-FKPEILNRMDDIVLFKPLSIDDMSMIVD----KILTQLNIRLLEQRISIEVSDDAKAWLGQYEPQYGARPLKR 825
8 -14.200IDP04143 gene: clpB; Clp ATPase [Yersinia pestis CO92] YPO3275 [Yersinia pestis CO92]  ali follow..  10  32.......................................................LHLMSALLNQDGGTVRPLLTSAGINVARLRSDIEQALGRLPQV-GGDVQPSNELVRVLNLCDKLAQKRSDKFISSELFVLAVLED--RGTLTDMLKAAGATVAIIDKAIETMRGGDKVDDQGAEDQRQALKKFTIDLTERAEQ-------------------------GKLDPVIGRDEEIRRTIQVLQRRTKNNP--VLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLD---MGSLIAGAKYRGEFEERLKGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMGNMLKPALARGELHCVATTLDEYRQYI----------------------EKDAALERRFQKVYVAEPTVEDTIAILRG---LKERYELHHHVQITDPAIVAAATLSHRYIS----------------DRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLE----------RRIIQLKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMSELQY--------------------------GTIPELEKQLAAATALEGKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLKSERDKLL------RMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNR-----IGSFLFLGPTGVGKTELCKALATFLFDSDDAMVRI--DMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD------------------------------------------------------------GQGRTVDFRNTVVGSDLIQEHFGQMNYSEMKTVVMDVVSHH-FRPEFINRIDEVVVFHPLGRAHLASIAN----IQLERLYKRLEERGYEVKITQPALEFLGEFDPVYGARPLKR 819
9 -14.100IDP91438 ClpB protein [Vibrio vulnificus CMCP6] VV1_0482 [Vibrio vulnificus CMCP6]  ali follow..  11  32.......................................................VHLMVALLDQNGSPIRPLLTILNVDVTHLRSKLSEMLDRLPKV-GGDVQLSSAMGAMFNLCDKIAQKRQDAYISSEIFLLAAIED--RGPLGQLFKELGLTEQKVSQAIEQIRGGQKVNDQNAEELRQALEKFTIDLTERAEQ-------------------------GKLDPVIGRDDEIRRTIQVLQRRTKNNP--VIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLD---MGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMGNMLKPALARGELHCVATTLDEYRQYI----------------------EKDPALERRFQKVLVDEPTVEDTIAILRG---LKERYELHHHVEITDPAIVAAASLSHRYVS----------------DRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLE----------RKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSR--------------------------MSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLL------RMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPI-----SFLFLGPTGVGKTELCKTLANFMFDSEDAMVRI--DMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTD------------------------------------------------------------GQGRTVDFRNTVVGSSRIQENFAMLDYQGIKEQVMEVVTKH-FRPEFLNRVDETVVFHPLGQDHIKSIAA----IQLNRLANRMEEHGYPLEVSDKALELIAQFDPVYGARPLKR 819
10 -13.900IDP02116 gene: clpB; clpB protein [Coxiella burnetii RSA 493] CBU_0094 [Coxiella burnetii RSA 493]  ali follow..  12  32.......................................................AHVMKVLLEQTQGTVAPLLEQSKVNLSRLIDGVNKAIDSYPQV-GGEVHVSRELSKILTLMDKFAQQNKDQYISSEWFIPAALEA--KGQLRDVLIEAGADKKAIEKNIMNLRKGERVTEQSAEDQRQALAKYTIDLTEKAET-------------------------GKLDPVIGRDEEIRRTVQVLQRRTKNNP--VLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALD---MGALIAGAKFRGEFEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMGNMLKPALARGELHCVATTLDEYRKYI----------------------EKDAALERRFQKVLVEEPSTEDAIAILRG---LKERYEVHHGVEITDPAIIAAATLSQRYIT----------------DRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLE----------RRLIQLKIEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHG------------------------TQQIKEELEQARIELEAAGRAGDLARMSELQYGIIPELDKKLKAASQKEEQFHDHKLLRSRVTEEEVAEVVSKWTHIPVSKMLEGEREKLL------HMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPV-----SFLFLGPTGVGKTELCKALAVFLFDTEDAMVRI--DMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSVILLDEIEKAHNDVFNVLLQVLDDGRLTD------------------------------------------------------------GQGRTVDFRNTVIVMTSN--EFSGENYDKMKDAVMEVVAQH-FRPEFINRIDEAVVFHSLKKEQIRNIAI----IQIDRIKKRLKEKDYQLTISDDALDYLSEYDPVYGARPLKR 820
11 -13.500IDP92125 heat shock protein, putative [Toxoplasma gondii ME49] TGME49_057990 [Toxoplasma gondii ME49]  ali follow..  9  32.......................................................LHLLEAMLQDKQSFATQVLSQCPGDFEQLKEDVHLAVLKFPQQHPPPDFPSPN-HSLMAVLRHAKDIQKKMNDSLMSADSLFSALVQEKGIRSHLTAAGFMMKQIEEKAKSVRGSKKIASSDDDANFEALKKYGTDFTDLAEK-------------------------GKLDPVIGREDEIRRVIRILCRRTKNNP--VLIGEPGVGKSAVVEGLARRIVEHDVPSNL------------VGSLIAGAKFRGEFEERLTAVLQEVKDAAGKIILFIDEIHVILGAGKTEGALANLLKPMLARGELRCIATTLDEYRKYV----------------------EKDAAFERRFQQVHVREPSVQATISILRG---LKDRYASHHGVRILDSALVEAAQLADRYIT----------------SRFLPDKAIDLMDEACAIARVQVDSKPEAVDVLERQKVQLEVELLALEKE-----------------------KDPASQKRLAEVKEHLGEVADALRPLYLQYQQEKARIDELGKLAQKQDELKAKIERAQRVGDLDLVAELRFDALPGVEARFKKLQE---------EQEEYERTHKPLLTEVVGPEQIADVVHRWTNIPVQKLTQTETERFL------TLGKSLAEQVIGQPQAVEAVTQAILRSAAGLSRRNRPI-----SFLFLGPTGVGKTELCKRVAESLFDSKERLVRF--DMSEYMEQHSVSRLIGAPPGYVGHDEGGQLTEEIRRNPYSVVLFDEVEKAHSQVWNVLLQVLDDGRLTD------------------------------------------------------------SQGRTVDFSNTIIAGFLIEAAQRVDPVAAATEMVMMEVRKF-FRPELLNRLDDIVIFKALTDVNLRQVMK----LQMQEVRERLAEKRIELTMTNRAADHIVKFDPAYGARPLKR 822
12 -12.800IDP92126 clp ATP-binding chain B1, putative [Toxoplasma gondii ME49] TGME49_068650 [Toxoplasma gondii ME49]  ali follow..  10  202.........................................................................................................................................................................................................................................KEVRRVIQILSRRTKNNP--IILGDPGVGKTAIAEGLAQRIVSGDVPDTLAGRQLISLD---LGALLAGAKLRGEFEERLKSVIREVQESSGQIILFIDEIHMVVGAGSAGEDAGNILKPMLARGELRCIATTLDEYRKYI----------------------EKDKALERRFQVVLVDEPRVEDALSILRG---LKERYEMHHGVSIRDSALVAACVLSNRYIQ----------------DRFLPDKAIDLIDEAASKIKIEVTSKPTRLDEIDRKLMQLEMEKISIVS---DMKGGQDAAEQQRLQTLEKKMADLKEEQSRLNAIWEQERAEIEKIADLKQEIDEAKVEQQKAEREYNLNKAAQIRYGKIPELTQKLATLEAAAKREELSSSRLLRDTVTAEDIAQVVGSWTGIPVSRLVEGEREK----------------------LEKALNDRVIGQ------------EEGVRSVAEAIQRSRAGLCDPNR-----IASLVFLGPTGVGKTELCKALARQLFDTEEALLRF--DMSEYMEKHSTARLIGAPPGYIGFDKGGQLTEAVRRRPYSVLLFDEMEKAHPEVFNIFLQILEDGILTD------------------------------------------------------------SHGHTVSFKNCIIGSDLLLQASGTKDREEVTQALMEIVRRH-LRPELVNRMDEFVVFNPLSEANLFGIFD----LEVAKLQARLTDRRLTLSVTHRAKADIVQYDPNFGARPLRR 845
13 -12.700IDP04291 putative exported protein [Yersinia pestis CO92] YPO3603 [Yersinia pestis CO92]  ali follow..  8  81............................................................................................................................................................................................................QHLEKLQLQTKIQLDDPVSADIEQQNHYLNGWKHQLQRHLNTLYRLPWYMVIGARNSGKSTLIKEGYKLT--GEQAVIIDPAGVLIEQPTTPIAGKASLN-SRLWQSLLSWLIEQRQRQPLNGIILTVDLHQMMTANDIHQRLQEIRLSLHSQVPLYVVFTKMD--------------------LLYGFEA---------MYQSLD---------KAEREAVLGVTFSLNAADPDVWRTELKQFWQQWVAQLNGAMPDMMLNSVDAGQRSQLFSFTRQMQGLHDYVVQLLEGILYRGEHAQLLRGVYLTSAQQRGQMDDIFTQSAPQAFPTWPVSDTTPYFTKALFNQVLLAEPNLAGENGIWLQKHYYHQLNYRAGEEVLTQAKTFLSIPPPEGDDRYGNLQLPLLNPIRDATLAYGNYHERSPFLADMGLYQGNNIGPYVESTYLQLLQQRPALMSGLLEQLNAAPKGSEEKLEILRVMRMLEDGSGRNAALVWSQQFNGQRELQEQLSSHLNYALKHTDWHGARESGDQYAIKSFVPYLRPIQSAQQELSKLSIYQRVYQNLRIKAQDALPPALDLRDQIGASFDDIFVSGNDRLLV-LTRSGLQSYFIKDQLVDLTVMDSWVLNLTKNVEYSEADRKEIHRQVTEQYLGDYTATW----------RAAMNNLSVSDFEGLPQAISAIEQVISGEQPFRRALQTLSDNTRLPVISDLIPAKEQQELLQKPDYLLLTRINREFSPETAVLVENGDKGSVIQSVYQKLT--ELHRYLLAIQNS............................ 890
14 -12.500IDP04460 putative membrane protein [Yersinia pestis CO92] YPO1482 [Yersinia pestis CO92]  ali follow..  8  82...........................................................................................................................................................................................................FDELRQQAQGDDAPLPEDNAQAGETQQGEPSRLKTRLRRRYGLFWRDKVLMVVGEPDEIAALAPQLAEQGWLEGQRTVLIHGGSLQRPADETGLSEWRKLRRGRPLDGIV-------------WAMTAAQSGTPQWMDNGLRTLEKMGAALRYQPPVYLWQVLLPQLREQGMQQLSIEPHHDFLLRLAQSLDQGDAARWRQRLTPWFTEYAARIPLRGLMFSLTVPASWQGVLDDCRGARGRRVGLPW--RHQMVSAAQQAQQLAQSHAVSDQQLLRNDIGRLQSRVAQGAYQRFGLDHNAPLLEVLMPWYGQANNRILRDATAQSLYQKANSPQRAARAKTGYDQLKAYL----MMARPEKADAVFYAQVMQTTEPTRAGVSPGLWQSLAPDLWQFYAQNLPATPDTGLISQVRQVLLGQMGQRNAESTLYENTRKAWDEQIQQAIDKTVASRREEIDWVLS---DNRRAISEDISPEALKKRLTERYFTDFAGSWLSFLNSLHWNEAHNLSDVIDQLTLMSDVRQSPLIALMNTLTGQQNQALSDSLVKSAKALMNKDQARVRLKLQQVVNASDPQEMTQVLAQTVFQGKSVDLTDTQEYGSLIAGQTMFVQPLTQAWETVLQPSSASLNDQWKNAVVANWKSAFDRYPFAAS----------------------------KSDASLPMLAEFIRKDSGRIDSFLTRELGGVLHKFNPAFLAAINQLSQISDILFTDGSQGLRFEAIDGQKLHYFNQMES-----QSFRW-TMLTWTGVSSGARLYGDYQGTWGLI-RWLEQAKQKKLDEG 1077
15 -12.300IDP04443 gene: clpB; putative Clp ATPase [Yersinia pestis CO92] YPO0506 [Yersinia pestis CO92]  ali follow..  9  42.......................................................EHWLKILMDQQRGDIPALLTHYGLSQTVISTQLDRIIQHMPVTKASVQDLSSRLESVVEGGLVLSQLMASPSPIRTSHILLALLQDTQHQRWLYRLCDEFKKLPVPQVAEEYEGLLVNSIEQTSEVQRGDALVTETDSSSSKEAHAALNKWCNDLTQQARDGEIDPVIGREAELRQVIDILLRRRQNN----------ILVGEAGVGKTAVVEALARKLASGDVPPLLQGARLLSLD---LGRMQAGASMRGEFESRLKSLIDGISQSDTPVILFCDEAHTLVGAGGQAGTGVNLLKPMLARGALRMIAATTWSEYKQFIEPDAALTRRFQRVLIGEPNESTAVDMLRHFAQHHNVTIRDGAIHAAVRLSLRNLPLLDTACARVALSQYAQPQAIEQLSAQLDVLKTELGEAVDQRLDDVQTQIQAFEHELTALQSRHLHEQQLVREVLPEGEGSGMMTENARWGELMALQEAGIPSGKMLQDDIECVLNLEQRLGDHIFGQNAIKEISQAIRIARAGIQSQERPLGIFLLAGSTGTGKTETANVLVETLYGGAHNLITFNMSEFQEAHTLSTLK---VGYGKGGKLTEAVRRLLDEFDKAHADIQDAFYQVFDKGWMEDAEGRRVSFRQCFILLTCNQGAEEIEQAYLTANDIKPGALKPLVYDALLRFAPALLARVNIIPYIPLDQDAAQIASHHLARLQTRLWDEIGATLVTEGDIPG----WIASRVCSHPNHGVEELLRQTLLPAVGNEVLKRRHEAEPLREIRLIVEETELSIEFA................................................................................................................................................................................... 867
16 -12.100IDP92581 splicing factor 3a protein, putative [Toxoplasma gondii ME49] TGME49_021940 [Toxoplasma gondii ME49]  ali follow..  10  13..............................................................................................................................................................................................................QDVRNAPSSSREQARVLQELSKIRQRFAHPKKPLTGYEKKKCLTKLLYILGPVDIGHAEAISLLSSPHYSERSAAFLFCSLLLVDSHTASRDLPDLRSL------CCSSIKKELSLQHEDFALALDCASYISDPDAAAELFPLMQATANPSSSASPLIRQKAYS--RLRPSLLPCEVWASRLGQALLFEQDIFHAVLQTSQLHRWQQQLQLSAINILARPLAVRLLQLLQCFQVSGGKREVLSDEPSRREDKRRDREDEAVVKQQREAVALSLNEIVKTIFTQVATANERQSSSGKGDRTGGSGDAAVPQRGTSFFSRKKGLGAHAVSPSVIQHAVL---------YEAISLSTHLQADADK----DLKLSAAALLCSFVEEGDSNFRYKSLSLVAAMAADPDVHPELKGAVPAEEDVSLRRQAISLLFALSGPDNWSEIVLALLESLHRDAETLPNISAHIAVLVETPDPTWLVDVAFQMLQRAPQHSLQTNETETNSQGGKRIPRRSV-----DQTSSCKDTLQAVLQNFWKMAASCCPLLPLLLFALVKLAHAFPADVLQVLQELHDSRDLELQTR--AVELSALLELPDRQFVAQTLALL.............................................................................................................................................................................................................. 668
17 -12.000IDP01772 gene: clpB2; Clp ATPase [Yersinia pestis CO92] YPO3599 [Yersinia pestis CO92]  ali follow..  10  39.......................................................SQVLLQMISTPLCDVRLILSHAGVEEDELRESLDQRVSGYQAITQAYPSFSPLLVEWLQDSWLLASTE-RSGVMLLTLLLSPSRYLVPTANRLLSPINRELLRQNFANWTADSAETPRAEKGAEAGNGAEINGDSLLARYASNMTEQARN------------------GELDPVLCRDTEIDLMIDILCRRRKNNP--IVVGEAGVGKSALIEGLALRIVDNQVPEKLRNSELMTLD---LGALQAGAAVKGEFEKRFKGIMAEIAQSTTPIILFIDEAHTLIGAGNQQGGLSNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPSAQEATIIMRGLRTVYEQAHG--------------VLIDDEALQAAAVLSDRYISGRQLPDKAIDVLD-TAAARVAINLTSAPRQVSALKNELYHQGMEIEMLEREQRLSLSRPDERLSVLQQQRIEIEQQLIALNTGWEKQQHLVQQIIALRAVLLAQEESATDEQVVNLTALSDELERLQQHQTLVSPHVDKSQIAAVIAEWTGVPLNRLSQSELAVVTELPSYLGQQIKGQETAIHCLHQHLLTA-KTETVLQIADLLYGGRQYLTTI-HTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRIIDCKNIVFFLTS------NLGYQTIVDHADEPALLNERLYPELSAFFKPALLARMEVVPYLPL----GMETLQIIIHGKLNRLDTLLRQRFSADV-VIEPEVIDEILLRATRAENGARMLE.................................................................................................................................................................... 822
18 -11.900IDP01651 gene: clpB5; Clp ATPase [Yersinia pestis CO92] YPO2946 [Yersinia pestis CO92]  ali follow..  9  38.......................................................VHWLNQLWHQEDNDLKQIIRYFAVDVDAFERELAQALAKLPVGATSISDFSYHIELATERAWIYAS-LECLDTRIRSGHLLLALLTTMELRRAFFAIAPSMEKIPLEHLSKDLNFITQASPEANEAASDGSPLYDGALPGEASNAIGAAKSGGALAQYTTDLTALAREGKIDPVLGRNHEINTMVDILLRRRQNNP--LLTGDAGVGKTAIVEGLALAIAAGSMPPALSQVSLLSLD---IVALSAGASMKGEFEARLKSVLDEAIAAEKPVILFIDEVHTLIGAGGNAGTGANLLKPALARGQLRTIATTWSEFKRHI----------------------EKDPALTRRFQVLQVDEPDENTAISMLRG---LIPALEKHHGVWIMDEALQAAVRLSHRYIP----------------ARQLPDKAISLLDTACARIAVAQFSQPIELQHLTFQSETAQTELVSLEKA--------RHFGKAQDARTEQLKTSIAEHGEAADKLDQRWQAERELVSAITTIRTALYDLVSQPEPDEEKRRAYQAQLVQLEAQLSQVRTS------------------------------------LPLVQTEVNAEVIASIVADWTGIPVGQMLKDDIRAVM------ELPQRLEARVIGQPHALMQLGENIMTARAGLSDPRKPLGVFMLV----------KTETALAIAESMYGGEQNMITI--NMSEYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFD..................................................................................................................................................................................... 717
19 -11.800IDP00175 putative ATPase subunit of ATP-dependent protease YPO1471 [Yersinia pestis CO92]  ali follow..  8  38.......................................................EHWLLKLLEQGEGDITVIARRYEWDMDSLWQGLLSHLDTLPRTVQGKPQLSAALQQLIKNAWLDASLQENADAVRSVHLMAALIATPSLLVAEAAWPLLSLSTTQLQRLLPLLDNQSDERPEVQQAAALADSPVNLTDEAATVTSASGQPQLNDALQAALDKFTLDVTAKARAIFGRDSEIRQMIDILSRRRKNNP--ILVGEPGVGKTALVEGLALRIADGNVPDSLKTVSVRTLD---LGLLQAGAGVKGEFEQRLKNVIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRRYATHHGVHILDAAITAAVTLSRRFLTLLDTAGARVRMSIDTLPTALMEINAELAALAMEIEQDLLLLPNVSSTRLPEIEQRRAALAVGQHTLEQQYKEEKRLTTLIIEARQDDVRTVAAVIADTGVPLGSLLKDEQTNLLSLENRLGERVIGQAALGALAQRLRAAKTGLTSENGPLGVFLLVGPSGIGKTETALALADSLFGGEKSLITINLSEYQEAHTVSQLK---VGYGQGGVLTEAVRKLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGREIDFRNTVIVMTANLGSDHLMQLLDEQPDAPDSTLHELLRPILRDFQPALLARFQTLIYRPLQVDAKRIVAIKLNQVAQRLHCHYGLSCQIEDSLTD----TLVAACLLPDTGAIDSLLNQQILPVLSQQLLSRMSEQQR..................................................................................................................................................................................................... 859
20 -11.800IDP01664 gene: flhF; flagellar biosynthesis regulator FlhF [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0064c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  12  178..............................................................................................................................................IENFEKQFEKQINKLNDKIDLLADMMWDDKAEARKNLMIPPEFASIYKQAKESGMLENHLEAIMKATIE-NMPAAMKTNKDAVQRYFHSLLRNILPCRVESDIK--KQKIMMLVGPTGVGKTTTLAKLAFRYADKRYKTGIITLDTYRGAVEQLFQYAKMMKLPIIDSIEPKDLDEAIKSLNNCEVILVDTIGNSQYDQSKLAKTKEFLMHSNAEIDVNLVVSANTKHEDLMEIYKNFSFLNIDTLIITKFDETKVFGNIFSLVYETNIPLQEVPDDLEVANSDFLVHCILEGFNKGKNN.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 483
21 -11.700IDP01335 gene: clpA; ATP-dependent Clp protease ATP-binding subunit VC1144 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  209........................................................................................................................................................................................................................................................RKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQRSVIYSLD---IGSLLAGTKYRGDFEKRFKSILKQLEKEKD-AILFIDEIHTIIGAGAASGGQVDAANLIKPLGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKTKY------------------------EAHHDVRYTNKALRAAVELSAKYIN---------ERHLPDKAIDVIDEAGARARLMPASRRKKTVGVAEIESMVAKMA-----------------RIPEKSVSSSDKDILKNLDQKMKMLVFGQAAIDVLTEAIKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGAPPGYVGYDQGGLLTDAVIKLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKV--FTPEFRNRLDHIIWF------NSLDERVIHQVVDKFIVELQAQLDARGVSLEVSEDWLAVKGYDREMGAMGRVIQEQLKKPLANELLFGSLVDGG..................................................................................................................................................................................................... 732
22 -11.600IDP06032 beta-adaptin-like protein, putative [Toxoplasma gondii ME49] EEB01577 [Toxoplasma gondii ME49]  ali follow..  7  1...............................................................................................................................................................................................MAAASPSAPPPPPPTHHVVVPRPPAGPQFFVDQKRGELYELRQVLRSLPTERDVTKQRDALKKLIAYMTVGLDDVVMLASTADLVQKKMIYQYLTNYADTNPSLSLLAINTFQ---------KDCNDEDPRLRGLALRSLCSLRLSCMLEYIEPAARKGASDPSPYVRRAAVMGMLKVC--KLLQELMATDEESSLQRIDEIRQR----------------------LHEALFDD-AICALNELEAETGGLQVTKKIATHFLNRIKRFGVCVILNLVASYQPETEEEAFDVMNILDDKLKSSSAAVV---GCANCFLELTRGNAELRKQVYCRLKPP--LLTLATTGYPEI---------AHTILRHILL----QTGGEDAVEIFAGESRQLFCRYTDPSYLKATKLQTLAAIATENNCVDMIAEIREYVCDAD--------------ADIARQSLAALGVIACRIPSAADDVVTLLLSFVEMELADFLASAAFVILRDI------------LRKYTKMISRLVEAIRIYALRLSDGEGVAA---VVWMLGEFSKNIDDA------------PYILEEIVDRFDE-EPPVVRMELLTAA--TKTFFNYPGEMQPILGKLLEKAVNDTS---NPDIHDKALFYYRFLKTSLQDARRILSTPLPPAEE............................................................................................................................................................... 586
23 -11.600IDP01480 clpB protein VCA0116 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  39.......................................................EYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTYSRE-QVLDTYPAFSPLLVELLQEAWLLSSTE-RSGAIFLAALTRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQARN------------------GELDPVLSRENELNLMVDILCRRRKNNP--IVVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLD---LGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSANLLKPALARGELSTVATTWKEYKKYF----------------------EKDPALTRRFQLVKLDEPTIDQAVDILRG---LNSVYEKAHNVLITDDALKAAAELSARYIS----------------GRQLPDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERA--------------------------QFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQ-----------MNTDELHKITHLTSILGQA------------IKGQETAIERIHRHLLTARADLRRPGR-----KGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTI--NMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFD..................................................................................................................................................................................... 706
24 -11.400IDP04729 putative membrane protein [Yersinia pestis CO92] YPO0515 [Yersinia pestis CO92]  ali follow..  9  52............................................................................................................................................................................................................ARAPLPKRKKKTVQLDRVSARFHDAMLTLQHADLSSQKTRWQRWRQRRFLVMGPPGCGKTSIVYE---------------SSEKFLLSEQYGLAQTTDIGPTQDCNWWL---------TDRAVYIDTAG-QSEEAGTARQKLFSMIRKYRRYPGVDGIVLCLD---VSVLLNSSVTERKSLA---------DTLRLRILEVASTFQADI------------AVYLFL-------------NNIDKLPGGETFLSLMNDELLAGHNEKGQNNFVADEERYRELLTRVSRYVLEILHDSEMRHQLLLFTESLGALQKPLFGLFEQ---IFPATPIGYTGCLR--------WFGSTQNLTSWEALYYPSSTSTFESRPAGQMYFPALSQAITERGVLHATGPMPLRNRLLNIGKYVFVVLVLCILLLMLSARYFWEYDYIGYATARFEETRRIVRDIPITNQVNDNLVAAYEQLGYINTHYLESSPPLLTPYFEHRLLNQAMLQTYHRHLNKVF------------------------------PAVQNYVTNELKKDTQSPDGDNYDTLKVYLMLGSQEALVQWFMSRWESFAPQGYGQNDRKLFSYHLSELFSPKVKLNDELIRESRIKAMKTPIHIRVINRIHDAPLPARIEDLSLADAAGPSVTLMLRRKSP-----------------------------STVTDLAIPAFYTRASYHDVVNPQLQEASEAMINEEAWVLSDGKASVSQVSLLAAAQKLSDEARKYYQWDAFFNDI-RVRPINGLDDAALLARQLSDPSSP......... 768
25 -11.300IDP00151 gene: mshM; MSHA biogenesis protein MshM VC0403 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  42........................................................................................................................................................................................................................................................GEGVSKLTGEVGTGKTMVCRMLLTHLGDEVALIYLPNPM---SGEELRQAVAAELQLDASPVRVVEQIQTRLHQQGKRVVALVDEAQALSDEAL--ETLRLFGNETEQTKLLQIVLIGQPELDVRLAQHHLRQFRQTFNANLRPLTQAETEVYIESRLQKAQAPYPNATLKKAVWR-PRLINQICH...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 236
26 -11.300IDP92130 helicase, putative [Toxoplasma gondii ME49] TGME49_061800 [Toxoplasma gondii ME49]  ali follow..  8  458VPADADTLVLT-EFDAMSVFQQTKVPAVSVPMGAHSLPVQVLPFLERFKKIILWMDDDGAELFAAKLGIGRCHLVRSSLVFDSLLR--ARPLSPEHSALNESAGCARTKRKAKAGRENCGESEEKSRHPTNKQTETLRGSRSSPPDSAGEEDAPEAARSEESAKTDLPDLRGGPPKDANEALLRGFDLKLFLESATP------VPHAQILTFRDLRNSVFDEVMNPGRVRGVPSVTLPAFTRLLGGLRRGELSVWTGGTGMGKTTILSQLSIDFCLQGVPTLWGSFEEIDGDRARFDFFADKFA-STHVDEVLDAMDYACYVLDVG-HVVLDNLQFMLSGQA-WDMQNSAIEKFRRFATISIVVHPRKEDDDAPLGLS---------------------------------SVFGSVKSTQEADNVIILQRRRRTAAQAGSASSRTSRRGGGGLESSGVPPAGEGAHVTNYLELRKNRFSGELGNVPYVFNRNSLTIRASTEKANIIEEGRETREKNIEKNGRNNVHAGVQLLQSGHFDTSKILF....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1008
27 -11.300IDP90627 gene: cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase [Vibrio cholerae O1 biovar eltor str. N16961] VC1239 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  2..........................................................................................................................................................................................................................................................TVHFVLGGARSGKSSYAELLAKQTAQALGATLHYVATATALDDEMRERIAHHQARRTAEWNEHEVLAEALTRFQRQDLVLVDCLEAALCAARIEQHVDSLLAALAQTQAHIILVSNE------------------------GMGVVPMGELTRMFVDHAGIAALADSVTFVVAGLPQRLK.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 177
28 -11.200IDP90100 ZZZ_0016 [Escherichia coli 042]  ali follow..  10  11.................................................KLTPESRNTLDSAINYAISRSHHEVDCLHLLWKLLQEHKYIAEVLYEQSLFNPEWVLNAIESELIRINTVPQSSPVFSESMQTLLEKTWIHASTKWQIDHIDIPVFLSTMINFRDSIFPLNVSDALCCDMDVAEELLISFSDEAEHSASHRPTDRSSHEYLSKYTENLSLRAETGKLDPVTGREKEVRQLIDILLRRRQNNP--ILTGEPGVGKSSIVEGLALQIASGRVPDVLKNVRIHALD---MGALLAGASVRGEFENRLKSLLTELNSLDGTAILFIDEAHSLIGAGGLPGQTANLLKPALARGELRIIAATTWGEYKKYFEKDGALARRFQIVKVAEPNQDVTAEMLRMMEKHHNVSIREEAITATVHLSDRYLHLLDTACSRVAVSQSTSPDAIQDVEASLVRYQGELALTQERSDVLRQEMLANKIAQLEEELEQLKSAWRHQSELVAKIDSPMVFECVDKNCVADVVSGTGVPLGVCLDGEQQKASGLLRCLEQRVLGQYAMSAIASQVLICRADLKDPVKPDGVFLLAGPSGTGKTETARALAEFVYGDENKLITINMTEFQEAHT-----VSTLKGAPPGYVGFGQGGTLTERVSHNP------YSVILLDEIEKAHPDVLEFFFQIFDSGIIEDRDCLIIMTSNFASENITNIWNDGETNRDRIKEMLLPLFNEHFG-FMGRTN--FTPLHSKTLRDIVLIKIDKICQRFEQASGQM-DWITHHCQCDKSGAIDSVLNSTVLPVLARYLTDSEDNRTPKKIRISVRK............................................................................................................................................................................................ 835
29 -11.100IDP91389 Type II secretory pathway, component ExeA [Vibrio vulnificus CMCP6] VV1_1437 [Vibrio vulnificus CMCP6]  ali follow..  15  42........................................................................................................................................................................................................................................................GEGIVKVTGEVGTGKTMVCRMLIDQLSDKVNLVYLPNPV---SGHELQMAIAREMGLKYDSVSLVPLIQDCMRQRGMRTVLLVDEAQALPLEAM--EALRLFGNETEQEKLLQIVLFGQPELDERIAQHELRQFRQTFSCQLRPLTIEEGVAFIDSRLAKAGLTTEQKKALWRGAGGPRLINQLCH...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 237
30 -11.100IDP92584 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] TGME49_044290 [Toxoplasma gondii ME49]  ali follow..  8  23....................................................................................................................................................................................................................RSKQEEDRIVANEIATLKVKLNEPNISQHKMQELLIRSLYVELLGDASFAHFHAVKMTNQT-IKAKRLGYLACNLFLSEDNELMLLLINTIQKDLASPNILNV-------------SALHCVARLLTPEMLPALLPSLSSLLQH-AAVRVMAVHKVLDLKEREQERRAKLAQQKGSRASSVDEDFESEVMEGLREK----------MRRALCDS-SLHVIHRLAAKNVAAWRDLVS--SLVSILKQIIDRKLPKDYEYHRVPAPWIQIKILSLLSTLAAGDQRAS---EEVYELLQEVMRRADAAGVNVAYAVIYECVRTIAALYPYPKLLDIAGCSISRFISARYVGVTGLAAVVQVSPAYATQHQLVVVDCLEDSDDTLKRKTLDLLVKITNPV-------------NVAVVVEKLLGHSRATVDAHLRANLIQKIIMLAERYSPDPRWFLETILCVLEVSGPSLPLASGGNARCLSGGSTAGNLAAGLCYSTAYSLLQLVAEGPTDDEESDKAFREYAVNDMVALLERKKLVIPDVLMQVISWVLGEFGCYYHAVIDLLASCEDPTTQAWILTAILKLCVFYGRCASVSTV-----DAGSDPSKSSRPRGISCGLLHLLQKQQR................................................................................................................................................................................. 632
31 -10.700IDP01877 negative regulator of genetic competence ClpC/MecB [Bacillus anthracis str. `Ames Ancestor`] GBAA0080 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  8  1..............................................................................MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEALIALGLSPEKVQKEVEALIGRGTEASQTVHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNANTPTLDSLARDLTVVARENRLVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRVMTLD---MGTVVAGTKYRGEFEDRLKKVMDEIRQAG-NIILFIDELHTLIGAGGAEGAISNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKRYEAHHRVSITSDRYITDRFLPDKAIDLIDEAASKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQEVTVEDIANVVSTWT-----------------RIPVSKLAQTETDKLLNLESILHDRVIGQEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDEDAMIRIDMSEYMEKHSTSRLV---VGYEEGGQLTEKVRRLLDEVEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTIVIMTSNVGAEAL-VQDESRDYSDMKGKVMDELKKA--FRPEFLNRIDEIIVF------HMLEKKHIQEIVTLMVNQLVNRLKEQEIELHLTEGAIADKGFDREYGALRRAIQKHVEDRLSEELLKGAIEKGQ..................................................................................................................................................................................................... 791
32 -10.700IDP00697 ATP-dependent Clp protease, putative SACOL2563 [Staphylococcus aureus subsp. aureus COL]  ali follow..  9  118........................................................................................................................................................................................................................................................TKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISVD---ISSLEAGTQYRGAFEENIQKLIEGVKSSQ-NAVLFFDEIHQIIGSGATGSDLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDTVEILKKFEEHHQVKLPDD-----------VLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAVDKVETEKRISELENDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTGIPVSQMDDNDIERLKNISNRLRSKIIGQQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMI----TLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGNGNDAEEKDIMHEMKKFFR----------PEFLNRFNGIVEF------LHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDWLIEEGYDEELGALRRIVEQQVRDKITDYYLDHTDVKH...................................................................................................................................................................................................... 686
33 -10.700IDP02389 gene: clpC; endopeptidase Clp ATP-binding chain C [Listeria monocytogenes EGD-e] lmo0232 [Listeria monocytogenes EGD-e]  ali follow..  10  199........................................................................................................................................................................................................................................................TKNNPVLIGEPGVGKTAIAEGLAQQIVRNEVPETLRGKRVMTLD---MGTVVAGTKYRGEFEDRLKKVMDEIRQAG-NVILFIDELHTLIGAGGAEGAISNILKPPLARGELQCIGATTLDEYRKYIEKDAALERRFQPIKVDEPTVEESIQILHRYEAHHRVAITDEALEAAVRLSDRYISVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQKLKKSLEETKANEVTEDIVAEVVASWT-----------------GIPVAKLAETETNKLLNMEKLLHERVIGQAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGD------DSMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKP------YSVVLLDEIEKAHPDVFNMLLQVLDDGRLTDSDFRNTVIIMTSNIGAQEMKQDKSMGFNVTDPL--------------KDHKAMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHVKLTEGAKSKIAKDGYDPEY--ARPLKRAIQKEV................................................................................................................................................................................... 772
34 -10.600IDP92583 beta adaptin protein, putative [Toxoplasma gondii ME49] TGME49_040870 [Toxoplasma gondii ME49]  ali follow..  9  3............................................................................................................................................................................................................................DGNYFQPAKRGELHELKEELHSSNKEKKKEAVKKVIAAMTVGKDDVVNCMQTTNMELKKLVYLYVINYAKAQPELAILAINTFR---------KDSLDPNPLIRALAVRTMGCIRLEEITEYLVEPLRRSCKDPDPYVRKTAAICV----------------AKLFSIRPDMVGEEGFIEELTTMLSDSNPVVVAN-----------AVAALSEISENSGRNYMK--NILNAKESNVNKLLAALNECTE---PETPRAAESVLDRVTARLSHANSAVVLSAIKVVMKLLDKVTNPDVVRAVHRKLCPPLVTLLSAEPE-------------QYVALRNIEL------IVQKRPSILASEVKMFFCKYNDPVYVKIEKLDILVRLVSEKNVDQVLSELKEYATEVD--------------VDFVRKAVRCIGRCAIKLDCAAERCVAVLLDLIQTKVNYVVQEAIVAIK-------------DIFRKYPNQYESMISTLCENLETLDEPA---AKASMVWIVGEYVDRIDNA------------DELLETFLETFHDEPSIVQLQLLTATV----LFLKKPAHTQDLVTKVLKMATEETY---NPDLRDRAYIYWRMLARNPEAAKKVVFAPKPPINED.............................................................................................................................................................. 553
35 -10.400IDP02312 FtsK/SpoIIIE family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA2190 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  483...............................................................................................................................................................................................................................................IHDKIEKKGHGPHGLMAGTTGSGKSEVIQSIIAALAATYHP-MAFMLIDYKGGGMSNTASITNLEDPNLIERARISLKAELERRQKHLFIVIDEFAQMKEQPEFMDELISVAAIGRTL-GVHLLLATQK----SGVVNDKIWSNSRFRICLRVQDDADSREMLKI--EYLQVTVGLIDDVANQAQYPLKLDL------------MPGTGKTTMLQTIIMSLAVSHTPEEGIIQEGENEKMKRLFGFLKQEITNRKESFSNIGAIVVMVDGRFKNEFEKENEVLELLLRESFYFSLNQTID------MFDRVRNNIPMALTFELQDGTEYHNLMKGQPPELFQAALPFIGESELEYSQQLKTIIQKMNGEWNGEKAKTIPMVPKEIFVEHMVGKLETAQISAGIETEDIRLQS-IGGRIEGGKTSLLQTLLFTTTYQYSPEKVELYERPTGILALGDLPHV-AIQLKEMLDELLELINNREAVMPTLDPNVTVEFPYKRIIIAIDDIDQMLTVLSNKIELIVQNCKNKGVHFMTAATTSS---WFAEIRKRSIGYLLGTTQNNDVYFFNMKLPHTEMDQELLSGDGYCIRRKPIKIKCAYTPLHLLRTMIDKISVKWTELKV............................................................................................................................................................ 1341
36 -10.400IDP92801 gene: cas3; Cas3 [Vibrio phage ICP1_2011_A] AGG09390 [Vibrio phage ICP1_2011_A]  ali follow..  8  348.........................................................................................................................................................................................................................................KFAWQNGVNMVDSSIDNMFCINMASTGKGKTLANLKLLQHFGNVRCSFLGMVSLTKQTAKQFLDMGVDYNSAATTTDHLVKASGVKKGNKQMHSDLVLDEIDDYGIEDM--VVLARLVYLTACYGNKVIISSAT---ITPAISNIFYEAYSSGYKVFCANKQTTYKGVNVVWWDEFGIKVEKVTDQFSNLNTRFVNKRITNLLESTPKHKALVVDQDDNMEAVKQSITTLHNAHNSGGVSTTIKDCVAVTQELQNWCYHSRFVGDTKAQMEEYLSKVLNRKGDEYKKFVDTTTPTAIVVATPVVEVGRDFDFDW-AIIEPSSERSIVQCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 751
37 -10.300IDP92713 OmpA domain-containing protein [Pseudomonas putida KT2440] NP_745234 [Pseudomonas putida KT2440]  ali follow..  11  67................................................................................................................................................................................................HHNLEGLLRDDADQAVLSAAPADREEVSLLRERLLQGIERLHSNKPRGTSNKDALYALPWYLVIGQPAAGKSTMILQ-----------------------SGLNFPYAEREGVRVAGLGGTRNCDWFFSSEA----VLLD-MNSPEEAGKWRGFLQLLRQHRQRRPLNGLIVSV----IADILHGSVEDQERVA---------KRLRERIQESCALLEVRL------------PIYLVF-CDLIPG--------------FTAFYRQLDDAARGEKGYEQADWGQRFSNAMDELTRYWGQMASQQLVQQD------------------------------IQVTRRNDAAYRFPLEALKPRLHQ--FVDSLLRANPYQNAEMLR--------FYFTAALQADEAQWGCHGQHVAERFALEHAEGTGTAGSQPAFINSLFRKVIIPDQHLVALYTSNHRERRRKAGWVGAAGLAALVLCSLWGWSYLNNRATLASIADELAQAKADDQAASGQYTAWRSLDRLRFWAAHYHEQHHAKGVPLGMRLGLYQGHEVEPLLRDRYFATLQNVML--KPTADNLTRTLYLLTT............................................................................................................................................................................................................................................. 564
38 -10.200IDP05133 gene: flhF; flagellar biosynthesis regulator FlhF [Clostridium difficile 630] CD0264 [Peptoclostridium difficile 630]  ali follow..  14  104....................................................................................................................................................................................................................EIVESIRIDLQEMKFNGIDTSKNLVEILKKKIKIENQVGKIALVGPPGVGKTTTIAKLAAKLFEENKKVGVITIDTYRGAVEQLKIYTDIMNIPFKGVISPDEMELALDEMKDCDVVLIDTTGRGYKNSMQILEIKNLIDKAETDN-IHLVLNCTTRESDTKAIIDSYRNVNFKSLIITKLDETITYGSIFNIMNYAQKPIS.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 308
39 -10.200IDP92576 RecName: Full=Myosin-D; Short=MyoD; AltName: Full=TgM-D MYOD_TOXGO [Toxoplasma gondii]  ali follow..  9  156...............................................................................................................................................................................................................................PDVDKLPPHVFYASRRAMTNMHQLKKPQTIIVSGESGAGKTETTKMLMK---------YLATSAGGNLDLKIQTAIMAANPVLEAFGNAKTVRNNNSSRFGRFMLLDVAREGGIQHGKVVAFLLEKIVCQDKDERNYHIFYQFLKGAPGHMRQRYMLQPLEAYTFDAPGIVDTEDFEQTVKSLESMNMTETETCTIWSIVSGVLLMNAKPTGKTEAGVENAACFVACSLLFLDYPSILHELTVKNKIESRWTVPDSEMLRASLAKGMFEQ------FLWIIRKLNADIEPKGGSFDVFMGLLDIFGFEVFQNNSLEQLFINITNEVLQRNFTDIVFEKELQLYSKEGILIETLLGKGTSVLAALEDQCISPSGTDEKFVSSLASKLAGNKCFIPSKNTKSLEFTVVHTIGKVIYNADGFAFKNKDVLRP---------------IIEITRASTNDVVRGLFEGVKVEKGKMAKGMLIGSQFMTQLKGLMEVIQ-------------------------KTESHFIRCIKPNDDKVPLKWVNSKVLIQLHAL-------ILEALHLRQLAFSYRRTFEEFAKTICVELLKSTSISADEYTMVFLKPQAAKMLVRLQREALSAWEPLVG...................................................................................................................................................................... 781
40 -10.100IDP05191 gene: fleN; flagellar number regulator [Clostridium difficile 630] CD0265 [Peptoclostridium difficile 630]  ali follow..  12  1.............................................................................................................................................................................................................................MIDQAQILRKIAMEKRGLDEFIVENENVPKIITIAGKGGVGKSNLATNLSICLTKLNKKVLILDADIGMSNIDIIMGVNVKGTIIDVING--KNIEDIISQTKYGVNIISGGSALNHIEDFTEAQRNKFIHSIEQIHDV-IIIDTGAGMSKSLLSFIYCSTEFFLITTPEPTSLTDAYSLLKAISNF---------------GIKRSANIIINRVIDLEEAKSTYKRIKMVVDKFLNKVSLCVKKQIPFILEYPTSIASKCIIAIAKRMVSQSRE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 274
41 -10.100IDP01342 septum site-determining protein MinD VC1960 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  8.........................................................................................................................................................................................................................................................SRIIVVTGKGGVGKTTSSAAIASGLALRGKKTAVIDFDIGLRNLDLIMGCERRYDFVNVINGEATLNQALIKDKRNENLFILPASQTRDKDALTKDGVQRVLNDLKEMGFDFIICDSPAGIEQGALMALYYADEAIVTTNPEVSSVRDSDRILGIL--------DSKSMRAEQGQAPIKQHLLLTRYNPARVTQGEMLSVQDVEEILHVPLLGVIPESQAVLNASNKGVAGQAYQDTVARLLGEQVEFRFLTE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 264
42 -10.000IDP92128 clpB protein, putative [Toxoplasma gondii ME49] TGME49_082200 [Toxoplasma gondii ME49]  ali follow..  9  59.................................................SISRDARDQLDQAEVLAMYMRHRQITPVHFLTVLLEVQGEFSIVRSLEQCGANVYLKKAMSNVLIKLPTSADVEIVDELESTPQLKRVALRALEIAQKDKKQTIGM------EHLITSLFEENNLRKSLEQAGCNVKVFLEHSTTMYENKFKQDVASRSMKKQPTEGSPATSRAKPDASDEEFVQSFGVDMTKLAAEGKLEPVVCLVGEPGVGKTAVVEGLAQRLVEGMVPKSLENKILFAVD---LGALIAGATYRGEFEKRMKALIRYAVNQEGRVILFIDELHMLMGAGKSDGTMANLLKPPMARGEIRLVGAT----------------------TQEEYKIIEKDAAMERRLKPIFIEEPSTDRAIYILRK---LSDKFESHHEMKISDEAIVAAVMLSHKYIRN---------------------------------------------------------------RKLPDKAI------------------DLLDEAAATKRVKWDLRSLNDDEVAMERKNSEQFEEETRKVEQQDQQRIEKQNHGDGTEE-----------------------------ELKNLEKEIEEQSLHEKQELVLTADDVAQVISLWTGIPLAKLTDDEKSKIL------RLSDLLHSRVIGQDDAVKAVADAMVRARAGLSREGMPVGSFLFL----------KTELAKALAMEMFHSEKNLIRI--DMSEFSEAHSVSRLIGSPPGYVGHDAGGQLTEAVRRRPHSVVLFDEIEKGHQQILNIMLQMLD----EGRLTDGKGLLVDFTNCVIILTSNVGAQYIISAYEQAEKESKTALATFDPKSGAKGAEAASEGDDSSSEKKDKKGAVLDKNKKSGNWKKEARRKILSEIAGSGLLKPEVVNRFSGVIIFEPMNPADVRKILA----IQSKDLKNALQRKGIELVIDASAEEFIVQYTHKFGARPLKR 895
43 -9.870IDP02671 gene: clpE; ATP-dependent protease [Listeria monocytogenes EGD-e] lmo0997 [Listeria monocytogenes EGD-e]  ali follow..  9  130........................................................................................................................................................................................................................................................NKNNPVLIGEPGVGKTAVVEGLANAIVAGDVPSKLMNKEVILLD---VASLVSGTGIRGQFEERMKQLIKELQERK-NTILFIDEVHTIVGAGSAEGSMGNILKPALARGDLQMIGATTLKEYRTIEKDAALER-RFQPVTVSEPSTKETLTILNKYEDFHEVVYSSARYIQDRHLPDKAIDLMDEVGSKNLSIEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAIIEEKT-----------------GIPVGRLQEDEQSKMKNLERNLTGKVIGQDAVKKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSISKLI---VGHEEAGQLTEKVRRLLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVSFKDTVIMTSNAGATDTEASVGFNTTTETKLEKGSDILAKLGAFKPEFLNRLDSVIEF------KSLEKDDLVQIIDLMLVDLNEMLAQEGVTIDVSKEHLIDLGYDPKFGALRRTIQEHLEDTIADSLIDQPEAKNL..................................................................................................................................................................................................... 706
44 -9.840IDP92606 gamma-adaptin, putative [Toxoplasma gondii ME49] TGME49_113670 [Toxoplasma gondii ME49]  ali follow..  8  16....................................................................................................................................................................................................................KTAADERAVVSKECAEIRTAFKE--GDGRYRHRNVAKVLFISMLGPTQFAQLECLKLLASPRFAEKRVGYLGLSCLLDEQSEVLMLATNSIK---------NDLQHPNQYVNGLALTALGNIGTGEMCGAIMTQVEDLLRCSNPFIRKKAALCGVRVV--KRVGDCEEKLLACLPALLADRNHGVLISACALITALAERDPSLVSTMRTHIPTLVLLRVLALLAKGDAESSAS---LSDVLAHVATNTEGAKNVGNSVTIEDDPGLRVLGVNILGRFLSSRNVKYVALGTLQQVVRVDSKAVMRHRDILLDCLKDQDLSLRRR--------------------AVEVLFCLITDDNVRGLV-----KELLNFLLMLNDAEFKQFVVNKIA------------VAASRHAPSTRWQIDTLLKLMTLGGDAVDDAITYSFVDLVVSTPPLHSYVVHKCYFS------------FQHSLSNNAALWQAGVYGDLLVKPEKGHLLSPNGGGSMTEDTLAITPRQVADLLISVAKAKQGVLTQTLLTAAAKLAARLPERLVGLLKRFETSNNVEVQQR--SSEYMGLLEWDEWKENTSIFD................................................................................................................................................................................................................ 601
45 -9.780IDP00975 gene: minD; cell division inhibitor MinD STM1815 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  2.........................................................................................................................................................................................................................................................ARIIVVTGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRVDFVNVIQGDATLNQALIKDKRTENLFILPASQTRDKDALTREGVAKVLDSLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGI--------LASKSRRAENGEEPIKEHLLLTRYNPGRVNKGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEAGKAYADTVDRLLGEERPFRFIEE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 258
46 -9.770IDP00588 gene: minD; cell division inhibitor MinD YPO2077 [Yersinia pestis CO92]  ali follow..  10  1.......................................................................................................................................................................................................................................................MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLRNLDLIMGCERRYDFVNVIQGDATLNQALIKDKRTDNLYILPASQTRDKDALTKEGVEKVLNDLGEMNFEFVVCDSPAGIESGALMALYFADEAVITTNPEVSSVRDSDRIL-GILSSKSRRAENS-------QEPIKEHLLLTRYNPGRVNRGDMLSMEDVLDILRIPLVGVIPEDQSVLRASNQGEAGKAYEDTVDRLLGEERPFRFVEE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 258
47 -9.420IDP92636 gene: tmcA; elongator methionine tRNA (ac4C34) acetyltransferase [Escherichia coli str. K-12 substr. MG1655] b2474 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  9  191........................................................................................................................................................................................................................................................PPGVAAVTAARGRGKSALAGQLISRIAGR----AIVTAPAKASTDVLAQFAGEKFRF---------APDALLASDEQADWLVVD---EAAA-------APLLHQLVSRFPRTLLTTTVQ----------------------YEGTGRGFLLKFCARFPHLHRFELQQGCPLEKMVSEALVFDDENFTHTPQGNIVISAFEQTLWQS--------------------DPETPLKVYQLLSGAHYRTS------LDLRRMMDAPGQHFLQAAGE-ALWLVDEGGLSQQLSQA----VWAGFRRPRGNLVAQSLAAHGNNPLAATL-------RGRRVSRIAVHPARQREGTGRQLIAGA-LQYTQDLDYLSVSFGYTGELWRFWQRCMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVDPLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQK--DAQLCTTLKLSGRKMLLVRQR---EEAAQALFALNDVRTERLRDRITQW................................................................................................................................................................................................................................... 667
48 -9.390IDP06029 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] EEB01203 [Toxoplasma gondii ME49]  ali follow..  8  15............................................................................................................................................................................................................DRASAGMRALINIVSKSECQYFEEGHFNAAQVKKELQDASVESKVTAMKRLLAAHAGGAPEVVKAIAVPDLELKRLVYLFLIQYAEGNRDLALLSINSFQKDLTDRNQV-ALKALASIRLLEVVLLVISLKRAAADCS-QDQFEELKSIVLTLVEVSVVGAALIAFRETPLPVPGLEAADQGKDAREFRGQAAALALLHGHYRRLQKCLLQLEPFTQVVAVDIFMRYCRLFFADPVEHYRRQPSATIGADTSSTDLGRTSEKTADSPGNPVPTDFRLFLSNLPLLLHSESSAVV---AATAALFSLLPSATSAWQAAVHPLLR--CMHTSAPDLQEPLLH----------TIAVLGSAAPSL-----------IPHVRSFFLRFSDSPTVKQAKLKVLRSLLVSASSQYSSGDGVSSLALLLLTEVRTYIHWPGDQALLSSSFRLLTFLALRFPGVQAASMQTFVQLLDAPSAAL-VLALQTLLQRQLEQQRESS------ARGGQLGHLLLQLVSQFPRVHAPPARAS---VVWIVGQYQREVGWVA-----------ADFLRQLVPKFKA-EAEEVKLQILLLA--LKVWAFHWLNKRGLAGDENDRVFNPD-------GEDGSGAPPAAT................................................................................................................................................................................... 708
49 -9.360IDP92608 Rab 11b, putative [Toxoplasma gondii ME49] TGME49_120480 [Toxoplasma gondii ME49]  ali follow..  12  14............................................................................................................................................................................................................................................................VILVGDATVGKTHLLSRYIRGTLPKSPKATITRTVPLAVGGTVKAQIWDTAG-----QERYRSITSAHYRRAVGALLVYDVTRKST------LNASKWLEELRQNSEVIMMVGNKLDLVEKDPTARDVP-----------------YELAAKFAQANGLYFSEASAVTAFNVKHIFEHLLQEIYNHRTQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 183
50 -9.230IDP93933 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001006900 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  8  1...........................................................................................................................................................................................................................................................MILITGGARSGKSSL----AERLAAQAAERVFYIATSVVTDAEMAARVALHRASRRTWEGYRDLGVVLEKHVEPGEAVMLECIDFTALEEGISQQITELLAACARSSAPIYLVTNE------------------------GMGIVPENRLARHFRDIAGLAAAADEVFLVVSGIEVKIK.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181
51 -9.140IDP92574 cell division cycle 48 protein [Toxoplasma gondii] ACU32853 [Toxoplasma gondii]  ali follow..  7  205...............................................................................................................................................................................................................................DDIGGCRKQMAQIREMIE-KTLGVKPPRGVLLYGPPGSGKTLIAKAVAN---ETGAFFFLINGPEVMSK------------AGEAESNLRRAFEEA--EKNAPAIIFIDEIDEKTNGEVERRVVSQLLTLMDGLKGRGQVVVIGATNRQNSIDPALRRFGRFDREIDIGVPDDNGRLEI------LRIHTRNMKLANDVKLEELAAN--THGFVGADLAQLCTEAALSCIREKMDLIDDTIDAQVLNSMAVTQEHFTSALQCCNPSSLRETVVEVPLEDVKRNLQEMILYPIDHPEKYEKFGMSRGVLFYGPPGCGKTLLA---------AVASECSANFVSIKGPELLTMWESEANVREVFDKARAASPCVLFFDELDSIGTQRGNSL---------------------------GDAGGAGDRVMNQMLTEIDGVGPMKNLFFIGATNRPEL------LDEALLRPGRLDQLIYIPL----DLPARISILQATLRKAPVAKNVPVPFLAQKTAGFSGADLAELCQRAAKAAIR--DIVYEITRKHFEEGLAGARRSVSQTDLTKYDNFRMKFDPLYKSQAAGGETQVLI.......................................................................................................................................................................................................... 781
52 -9.070IDP92596 Ras family domain-containing protein [Toxoplasma gondii ME49] TGME49_089680 [Toxoplasma gondii ME49]  ali follow..  8  14............................................................................................................................................................................................................................................................IVLIGDSGVGKSNMLSRFTRDEFNLESKSTITKSVYLDEGKVIKAQIWDTAG-----QERYRAITSAYYRGAVGALLVYDITKRQS------ENVERWLKELRDHADVILLVGNKSDLKHLRAATKFANREHLAFIETSALDATNVEQAFHQILAEI............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 173
53 -9.070IDP01831 gene: ftsY; signal recognition particle-docking protein FtsY [Bacillus anthracis str. `Ames Ancestor`] GBAA3985 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  12..............................................................................................................................................SKQTDTVTEKFKQGLEKTRNSFADKVNDLVFRYRKVEDFFEELEEILIGADVGVSTVMELIDQLKEEVQRRNIQDPREVQAVISEKLIEIYKGDSDFTNEVNMQKDGLTVVLFVGVNGVGKTTTIGKMAHKFKSEGKSVLLAAGDTFRAGA--IEQLVEVIKQGSGSDPAAVMYDAVQAAKARNVVLLCDTAGRLQNKVNLMKELEKVKRVIEREHEVLLVIDATTGQNGLSQAKTFREATNVTGIVLTKLDGTAKGGIVLAIRNEMDVPVEQMDDLQQFDPEQYVYGLFANLVETEE................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 328
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.