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Query: IDP01174 hypothetical protein BA_2823 BA_2823 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNNILNQIKKEVNMDLLNGLWPGFKRAAFALYDDEHVYVFHHPLFLKDNDEYRVLKWEEQFKGDTCILFKDYPTAIVNMNRYKDYASLLAIVVHELFHCYQYLNKESRFPNESLGFQYPIIEENIQLRNKERICLYDAVHCKSQAEKNNYIKQFIELREQRASVMGEAFITYEYMVESIEGPAWYVEMNAYNTVCKSDESDTLRKYSGLILDVYDANCNMRKSCYSSGMLLCLLLDEILPEWKISFFNSDKSLYAFLKQNINVDLSLNNEITISKETKQILHFVQNERDKEIKQFYGEEGYDLYIVGDIKLNSFNPMNVKLNGNKVLHKTFLSVSIHNKTYMINQPVLASFEEDFKNMTQVHIIMNEKPIETKNGLast
1 -116.000IDP01174 hypothetical protein BA_2823 BA_2823 [Bacillus anthracis str. Ames]  ali  100  1MNNILNQIKKEVNMDLLNGLWPGFKRAAFALYDDEHVYVFHHPLFLKDNDEYRVLKWEEQFKGDTCILFKDYPTAIVNMNRYKDYASLLAIVVHELFHCYQYLNKESRFPNESLGFQYPIIEENIQLRNKERICLYDAVHCKSQAEKNNYIKQFIELREQRASVMGEAFITYEYMVESIEGPAWYVEMNAYNTVCKSDESDTLRKYSGLILDVYDANCNMRKSCYSSGMLLCLLLDEILPEWKISFFNSDKSLYAFLKQNINVDLSLNNEITISKETKQILHFVQNERDKEIKQFYGEEGYDLYIVGDIKLNSFNPMNVKLNGNKVLHKTFLSVSIHNKTYMINQPVLASFEEDFKNMTQVHIIMNEKPIETKNG 375
2 -11.100IDP91732 O67990_VIBMI [Vibrio mimicus]  ali follow..  348LNAKEEDFHQVVNSGYVPVADDNTERVEVAVFANNDSY------VNYSAFLFNNTTDNGGQYLEGNPAEANNQARFVAYRYANGDDLSILNLEHEYTHYLDARFNQYGTFSDNLAHGHIV---------------------------------------------------------WLEGFAEYMHYKQGYQAAIELIPQGKMSLSDVMATTYSHDSN---RIYRWGYLAVRFM----------MEKHPQDVESLLVLSRPGQFAQWAQTNLGEQYNAEFAVWLDTFKAETPENPDPSEPETKPEEAVTALTANQSVTLSGQAYSEHLFYIDVPEHSREFQVT............................... 618
3 -11.100IDP02340 hypothetical protein GBAA2884 [Bacillus anthracis str. `Ames Ancestor`] GBAA2884 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  63IRIIAESLPIIIQENAYHNKFNFDVKMKFHLF--------------------------GGFGSNAFVEREIIGDMFFAAEKLPDLNHLRVIVAHEIGHIYHN------------------------------VMLQNDGMDWGKAEWADATVNLYR-----------------------EGIATYLSKQIIKGLNEENEEHIKKRFLEDYIEGWTFEKEKEWFRYFLGTAFVEYIVQALGESEVFIFWNKYNLKSSVLDWLS................................................................................................................. 280
4 -7.920IDP01176 peptidase, putative BA_2869 [Bacillus anthracis str. Ames]  ali follow..  12  43LVSALNVYKKGKISITWHEIMVKENNEAIIPFSVAVQNIYGA-RNAIESGWVDAEPRENKPPGGFCAPFFSEKESRISMRYDGSIDS-VRILAHELGHAWHFYNMSFEQSSSFLDDYLPMSTAESASIFFETLLINYLIQTDSIDIKKSLLSWKIRMAIRASFEFEKNFYEKCKESPISADEIEKISIVAQEKAYGNALSEYQPFVWMKYVQFYIADVPFYNYPYTFGYLVSFSLSTFHSKFKEFLRENGKPVEELIKKHFEIDITS----------YAFWDKAFKQISKDIDAYLR.............................................................................. 356
5 -7.860IDP00224 putative membrane protein YPO3058 [Yersinia pestis CO92]  ali follow..  81YAKFTSVILADT-----EDTWKPIFQKMGRTYQDPKLVMYRGATQTGCGTGQSVMGPFYCPADSTIYIDLSFYEDMKNKLGAGGDFAQAYVIAHEVGHHVQHLMGIDAKVRQQQQGV-SQAEGNRLSVKMELQAWGKAMEEQQVLEAGDLQEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQ............................................................................................................................................................................................... 264
6 -7.820IDP91565 gene: ECs0850; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34273 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  52YQQIEAALDKIGSTETGRVLLNAIESIS----LKSETVVIHLNSSRLGVMAHRDIDAENHRGTGSDFHCNLNAVEYPCGEGISVVDFHATIVFHELLHVFHNLNGERLKVESSRA----ESQKYSPLLLEEARTV-GLGAFSEEVLSENKFHE-MPRRTSY...................................................................................................................................................................................................................... 206
7 -7.220IDP02828 hypothetical protein GBAA4243 [Bacillus anthracis str. `Ames Ancestor`] GBAA4243 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20.....DRVAKDLAV--AESIWHPIVLNELFRFSDREISYKDSIQSQEKLASFFQTCVNEAPECDLYICYIGSDYFYIVLTNSAAPMKNIYTLAHEIGHILFTRRVHGKLTHAD-----PHSPTGSEHHPSPTNLMYPIVPRPENVHIQSLLEQKALSLQSSLLQRKKQ............................................................................................................................................................................................................... 205
8 -6.480IDP02619 gene: nrdF; ribonucleotide-diphosphate reductase subunit beta [Bacillus anthracis str. `Ames Ancestor`] GBAA1372 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  6WNKKEDDFSLMFWKQNIAQFW---TEEEIAVSSDKNTW----VQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGIITSYYRRLLKPEVTK-----------------KELYMAMVASVFLESYLFYSGFFYPLYLAGQGKLTASGEIINLIIRDESIHGVFVGILAQQ------IFAELSAEDQQEVQKE---TQELLMELYEIEMAYTEEIYTSIGLVEDVNRFVRYNANKG................................................................................... 264
9 -6.390IDP02151 hypothetical protein GBAA3159 [Bacillus anthracis str. `Ames Ancestor`] GBAA3159 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  59..............QAADSAWYTASRINFTVSASSVNTLNSWFESSSTYYGRMKTSYNTSTKKVTKFAGD-------GNTNITKSNVAKSTGVHEFGHAIGIGH----------------NSGTSIMNSNRNRTTMHVPQTDDKNGVNAI................................................................................................................................................................................................................................. 174
10 -6.260IDP05145 hypothetical protein BAS4679 [Bacillus anthracis str. Sterne] BAS4679 [Bacillus anthracis str. Sterne]  ali follow..  128.EDLWDMYRTLIPAKYRGNI------TEFDLITDGYD------------GVVAHVMLSIENPKDWTLSLD-------TLDSAVNIDEVMKTLIHETAHVLTLGHKQIPVDENYIKDFEEDKDENSYIHQFYNSFWKSIEQEWTEKKVEESEETQIEFFKEKHDEFVSQYGTTNVAEDIADTFTAFILQDSKKVKEGTELKYKKIAFFYQFPELVKMRAEVLSGLYDIS................................................................................................................................................... 348

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.