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Query: IDP01235 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase BA_5512 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKICTMGLGYIGLPTSAMFAKYGTEVVGVDIHQKVVDKLNNGEIHIEEPGLGEVVKEVVANGKFRASLTPEEADAFIISVPTPNHDDEHKSCDLSYVLTATEKVLPFVKKGNVIIVESTIAPRSMDDYVKPLVEEAGFTVGEDIYLVHCPERVLPGQILHELVHNNRIVGGVTPACAEAGARVYGVFVEGEIIKTNAKTAEMSKLMENTFRDVNIALANELTKVCNSLDINVLDVIEMANKHPRVNLHYPGPGVGGHCLAVDPYFIVAKAPELANIIKLSRETNVSMPHYVTEKVKELLAGVENPKVAAFGVTYKGNVDDMRESPAMDVIDLIRNEGITVSAHDPHVESDFFELHSAEEAVKDAHLILVLTDHDEFKTMNYDSLAPYMAKTVVFDTRNCVQAVSTGEMKIINFGTLYEALNKNVMMVLast
1 -112.000IDP01235 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase BA_5512 [Bacillus anthracis str. Ames]  ali  100  1MKICTMGLGYIGLPTSAMFAKYGTEVVGVDIHQKVVDKLNNGEIHIEEPGLGEVVKEVVANGKFRASLTPEEADAFIISVPTPNHDDEHKSCDLSYVLTATEKVLPFVKKGNVIIVESTIAPRSMDDYVKPLVEEAGFTVGEDIYLVHCPERVLPGQILHELVHNNRIVGGVTPACAEAGARVYGVFVEGEIIKTNAKTAEMSKLMENTFRDVNIALANELTKVCNSLDINVLDVIEMANKHPRVNLHYPGPGVGGHCLAVDPYFIVAKAPELANIIKLSRETNVSMPHYVTEKVKELLAGVENPKVAAFGVTYKGNVDDMRESPAMDVIDLIRNEGITVSAHDPHVESDFFELHSAEEAVKDAHLILVLTDHDEFKTMNYDSLAPYMAKTVVFDTRNCVQAVSTGEMKIINFGTLYEALNKNVMMV 427
2 -102.000IDP00702 gene: cap5O; capsular polysaccharide biosynthesis protein Cap5O SACOL0150 [Staphylococcus aureus subsp. aureus COL]  ali follow..  61  1MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVSTTPDASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILSFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTEACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKLIQTGREINNSMPAYVVDTTKQIIKVLSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEDIEVCAYDPHVELDFVE-HDMSHAVKDASLVLILSDHSEFKNLSDSHFDK-MKHKVIFDTKNVVKSSFEDVS-----YYNYGNIFNFI... 418
3 -97.800IDP01406 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase VC0918 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  46  4.KVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTINKGEIHIVEPDLDIVVRSAVMTGKLKATLTAEPADAFLVAVPTPFKGD-NHEPDLSYIEAAAKTIAPVLAKGNLVVLESTSPVGTTEKLAQWLAEAQQKGIAADVKIAYCPERVLPGYVLQELVSNDRVIGGVSKACSEKAVALYKTFVKGECIVTNARTAEMAKLTENSFRDVNIAFANELSLVCNKLKINVWELIRLANRHPRVSILNPGPGVGGHCIAVDPWFIVNSCPDEAQLIRTAREVNDGKPHWVVDQVKQAADQFKKPIIACLGLAFKADIDDLRESPALDITKHLAESKGQLLAVEPNITEQGIELVSLERALELANIVVVLVDHKEFKAADKTEF----AKKVVIDTRGVVA.......................... 413
4 -94.200IDP00425 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase YPO3863 [Yersinia pestis CO92]  ali follow..  42  4ETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHIVEPDLDKVVKIAVEGGYLQAVTKPQAADAFLIAVPTPFKGD--HEPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEAQQAGEAADINIAYCPERVLPGQVMVELIQNDRVIGGMTPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVSQNPQLARLIHTARLVNDGKPLWVVDRVKAAVADASEVKIACFGLAFKPDIDDLRESPAVGVARLIAEWHGETLVVEPNVEQGLVTLKDTATALQQADVLVMLVDHKQFKAIKPEDI----KQQWIVDTKGVWR.......................... 420
5 -92.900IDP04467 putative nucleotide sugar dehydrogenase [Yersinia pestis CO92] YPO2174 [Yersinia pestis CO92]  ali follow..  24  1MKVTVFGIGYVGLVQATVLAEVGHDVLCIDIDANKVADLKKGRIAIFEPGLAPLVKENYEAGRLQFSTDVAHGVIQFIAVGTPPDED--GAADLKYVLDVASTIGTYMDSPKVIIDKSTVPVGTADKVHQVIQAIEQRGEKIDFSVVSNPEFLKEGAAVADCKRPERIVIGIDTDALELISELYEPFNRNRMLVMDIRSAELTKYAANGMLATKISFMNEIANIAERLGADIEKVRQGIGSDSRIGFIYSGCGYGGSCFPKDIQALIRTAEDKGQLLQAVEQINNQQKYKLTEFIKSHFSQLAGKTFAVWGLAFKPNTDDMREAPSRVVMESLWEAGATIQAYDPEAMDETQRMGTKESALQGADALIICTEWQSFRAPDFDMIKSRLKHPVIFDGRNLYDPERLNSR-----GFTYYGIGRGVSI. 445
6 -82.200IDP95261 WecC protein [Acinetobacter baumannii ATCC 17978] YP_001083149 [Acinetobacter baumannii ATCC 17978]  ali follow..  30  2......................................................................................DQVNRPDLTPLKKASETVGQALKKGDIVVYESTVYPGATEEVCIPILEKSGLKFNQDFFAGYSPERINPGDKVNTLTKIKKITSGSTPEVANTVDAVYASIITATHKASSIKVAEAAKVIENTQRDLNIALVNELSVIFDRIGIDTLDVLEAAGSKWNFLPFRPG-LVGGHCIGVDPYYLTHKAEEVGQVILAGRRINDNMARYVARNTIKLMIDVPRSKVGVLGVTFKENCPDIRNSKVADLIKELEFWGAQVVVADPWADAEEVKELGTVNAQNPVDSLIVAVGHSEFRSLSASELRSYVKKPVLADVKSLFDRTQMSDV-----GFTVFRL....... 345
7 -77.900IDP01494 UDP-glucose 6-dehydrogenase VCA0780 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  20  1MKIAIAGTGYVGLSNGILLAQ-HNEVVALDIVVSRVEQLNDKISPIADPEIESFLQHQP--LNFRATCDYQDAQFVVIATPTDYDPQTN-HFDTRTVEAVIDDVLA-INPQAIMVIKSTVPVGYTKRIKQRLCC---------NNLIFSPEFLREGRALYDNLYPSRIIVGESERGQAFATLLAQGAKKMPILLTHSTEAEAVKLFSNTYLAMRVSFFNELDTYAETHGLDTKQIIEGVGLDPRIGYNNPSFGYGGYCLPKDTRQLLRNFEDVPNLIRAIVDANTTRKDHIAFSILN----RNPKVVGIYRLIMKSGSDNFRASSILGIMKRIKAQGVEVVIYEPVLNEGSPVIRDLAQFKAMAEVIVTNRRVAELEDVAE-----------KIYTRDLFGQD........................ 388
8 -75.200IDP01969 gene: kfiD; putative UDP-glucose 6-dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1441c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  20  1MKIVIVGIGYVGLANAILFSKNNNEVVLLDIDENKIQSINNHKSPIKDKLIEKFFVQNI--SKLHATSNYFNADFAVIATPTDYDEQLN-FFDTRSIENVLKDIKN-INSKINVIIKSTVPIGYTKTIKQKF---------NMSNIVFSPEFLREGSALYDSLYPSRIIIGDKSVGKTIGDLFLKNIEKKDIFYMDSDEAESVKLFSNTYLAMRVGFFNEVDSYARKHNLNSADIIKGISADDRIGYNNPSFGYGGYCLPKDTKQLLANFYNINSLIKAIVETNEIRKKFITQLILE----KKPNILGIYRLIMKQNSDNFRNSVIIDIIKYLQEYNSNIEIYEPLVKENIKVENDFNVFGAKVDLIIANRFDDKLKEIK-----DKVFSADVFY-TDI............................ 393
9 -19.300IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  13  1MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVAVYT----------------SPIDLAAKVDLVFTMLSDK-----------AAIDAVLAPKFWEQMSKKIVVNMSTIAPLESLSLEKIAQKHQATYL--EAPVSGSVGAAKAGALL--------ILAAGDEEVISKLKPVLAHLGSQTFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIG........................................................................................................................................................................................... 203
10 -13.000IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  4LQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDET-------IEENRGKNLVGTHIVEEF-----VNSLESPRKILLMV--------NAGEITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAEEG------GAGVSGGEEGALKGPS---------IMPGGQKDAYEKVKDMLENISAKVSYIGPNGAGHYVKMVHNGIEYGDMQLICEAYFFLKQTLDEFHEIFAEWNKGELNSYLIEITA-TGKPLVDVILDTAGQKGTGKWTSQSALDLGISLPIITESVFARCISALKEERVNASKVLSGPKDKTAIGVEKAELIEAV---------------RQALYMSKICSYAQGFTQLKAASEEYNW-NLDFGSISMLWRGGCIIRAA.............................. 371
11 -13.000IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]  ali follow..  10  4ANFGVVGMAVMGRNLALNIESRGYTVAIYNRSKEKTE---------------DVIACHPEKNFVPSYD-VNSIEKPRRIMLMV--------QAGPGTDATIQALLPHLDKGDILIDGGNTFYKDTIRRNEELANSG------GTGVSGGEKGALEGPS---------IMPGGQKEAYELVADVLEEISAKATYIGPDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSAEDMAEI............................................................................................................................................................................................ 219
12 -11.700IDP02668 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1526 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  3.KITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHEN------SRYLPGITLPSTIVAYSSLEEANVVLIVVPT------------KAYREVLQDMKKYVAGPTTWIHASKIEPGTSKRISEVIEEEIPEDLIKDVVVLSGPSHAEE---VGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNII-ALAAGITNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTGMG-----LIVTCTSVHSRNWRAGNMLGKGHSLEE-----VLESMGMVVEGVRTTK-AAHELAEKMEV----EMPITAALYDVLFNGNNVK...................................................................................... 318
13 -11.300IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  1MNIVVLGPGAVGSLWALHLHSAGHQVALWSRQAQPTITLQLDEEAPISFRNQN-------------LDTLIHADLLLITVKA-------------QVEAALQPLLPHLNRETILLFMHN--MGAVEAISESLTHFPVLFA-----TTHGALKATLNQVSHT--GFGQTQVGPFNALGARCDFIADVFNHALAPVTEIQQALWRKLAVN-------CAINPLTAIHQCAN--------------------------GALVAPEFTPIITAILDEVTAVMQAEAISGEAEA-LRDGVYQVIQATAANLSSMH-----QDVFHRRPTEIDFITGYVVRKGEQHGIATPVNSALYQQIKTLEQSWSKA............................................................... 296
14 -10.800IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  18KKVAIIGYGSQGHAHAQNLRDNGFDVVVGLRKGKSWDKAKEDGFSVYTV-----------------AEAAKQADVVMILLP-----------DELQPEVYEEEIAPNLQAGNSLVFAHGFNVHFDQVKPPVNVDVFLVAPKGP-------RTFSEGGAVPALFA---VYQDATGVATEKALSYADGIGATRAGVLETTFKEETETEQAVLCGGVTALVKAGFETLVDAGYQPELAYFEC............................................................................................................................................................................................ 227
15 -10.800IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali follow..  7.PIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVN------NRYLPNYPFPETLKAYCDLKASTDILIVVPS------------FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELG---QVPMAVISGPSLATE---VAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNIL-AIATGISNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLG-----------LVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAI----EMPLTFQVHRILHEDLDPQ...................................................................................... 318
16 -10.700IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  4.NILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKNNNHKYLPSIEKFPSRLKAIQDWQAN--IIEFDSILVATPS------------SGFKNTILELKECILPQQNIISATKGFCHDSYALLSEIAEDI---PTTKFALLTGPSFAKE---LANQLPTAVVVASKDINYARYVQELFSNENFRCYTTTDIIGAQVGGAVKNVL-AITAGIANAHAALITRGLAEIKKLGLKLGANSETFIGLSCLG-----------LLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNLAKKHNV----EMPLVFATYRILYEAADPR...................................................................................... 317
17 -10.200IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  19KKVAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVK----------------AKNAGFEVVSVSEASKIADVIMILAP-----------DEIQADIFNVEIKPNLSEGKAIAFAHGFNIHYGQ--IVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESKNAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLALIQAGFETLVEAGYEPEMAYFECLHEMKL-IYQGGI--------ADMRYSISNTAEYGDYITGPKIITEETKKAMKGVLKDIQNGVFAKDFILERRAGFARMHAERKNMN----SLIEKTGRNLRAMMPWISAK............................................................................. 332
18 -9.760IDP05101 gene: hbd; 3-hydroxybutyryl-CoA dehydrogenase [Clostridium difficile 630] CD1058 [Peptoclostridium difficile 630]  ali follow..  12  1MKLAVIGSGTMGSGIVQTFASCGHDVCLKSRTQGAIDKLDKNLTKLVTKGKMDEATKAEILSHVSSTTNYEDMDLIIEASVE----------DMNIKKDVFKLLDELCKEDTILATNTSSLSITE---IASSTKRPDKVIGMHF---FNP----------PMMKLVEVISGTSKVTFDTVFELSKSINKVPVDVSESPGFVVNRIL--------IPMINEAVGIYADGVASKEEIDEAMKL--------------GANHPMGPLALG................................................................................................................................................................ 229
19 -9.320IDP02524 gene: ilvC-2; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1852 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  17KTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMS-----------------VSEAVRTAQVVQMLLP-----------DEQQAHVYKAEVEENLREGQMLLFSHGFNIHFGQINPPSYVDV--AMVAPKSPGHLVRRVFQEGNGVPALVA---VHQDATGTALHVALAYAKGVGCTRAGVIETTFQEETETEQAVLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELKLIVDLMYEG-------TNMRHSISDTAEFGDYVTGSRIVTDETKKEMKRVLTEIQQGEFAKKWILENQAGRPTYNAMKKAEQ----HQLEKVGEELREMMSWIHAP............................................................................. 329

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.