Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: IDP01485 hemolysin secretion protein HylB VCA0220 [Vibrio cholerae O1 biovar El Tor str. N16961], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .
# Score Template Links and tools%idFirst MIINKFSLKWMLAIAVAIPAIALLFVAFTSLNTMSVMQAQSNSLYANTAAPMRAMAEATSRIPRMRVGIDMMLLQETALKDAKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFELLast
1 -95.600IDP01485 hemolysin secretion protein HylB VCA0220 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali  100  1MIINKFSLKWMLAIAVAIPAIALLFVAFTSLNTMSVMQAQSNSLYANTAAPMRAMAEATSRIPRMRVGIDMMLLQETALKDAKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL 548
2 -84.600IDP04179 methyl-accepting chemotaxis protein [Vibrio cholerae O1 biovar eltor str. N16961] VCA0068 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  25  4.LLSGLSIKLQVVVPVFFTLLLLIIGITFSTSSLKTAFHQVTVSTEQLITDKDNLTTLIDNTYAMRISAIYSLFRPAEVTALPNVLKEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMI--PLLNIEHSDQEKDERFTAQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREI-AKGNLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
3 -67.500IDP91343 methyl-accepting chemotaxis protein [Vibrio vulnificus CMCP6] VV2_0072 [Vibrio vulnificus CMCP6]  ali follow..  34  171.......................................................................................................................................................................................................ALPGLGIWSLLLLSVAISYSSTRRLESLSAEARKV-FDNPLMELVYNKKVDDISEIKLALKMRQSELNAVVGRIQDSNQQLIDSARNSSSNSDKASHNLKGQTHETEQVAAAITEMHSTANEIAQNAQSASDATDQAHSAASEGMITVQDTVKAIKLLAGQLDETSDVVSQLAQHGKTIGDVLIIIQGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAQRSHESTEEIQKVIGLIQSSTQKAVSSMSEGTHLAEQCVSSADSSGQKLQILLDQVTDISDRNNQIATAVEEMARVTEDMSSSVQSISDACSATNVLSSDTCHQCNALVKSLDSQGKLVSQFR. 517
4 -64.700IDP95280 methyl-accepting chemotaxis protein [Acinetobacter baumannii ATCC 17978] YP_001085820 [Acinetobacter baumannii ATCC 17978]  ali follow..  26  295.........................................................................................................................................................................................................................DRNQNAILRLLDEIADLA-DGDLRSYATV-SEDFTGAIADSINFAIDQLRDLVSRIHETSQEVARYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQIASNGAQVVNRSIEGMDTIREQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILALNAAIQASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVKTIQTDTNEAVISMEQTTTEVVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQTTTATFDTARSVSELANMAESLRESVTDFKL 623
5 -57.600IDP01047 putative methyl-accepting chemotaxis protein STM3152 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  20  3.LLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEV-SEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGG------GTPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFGASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRI-AQGDLSQPIEALGRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMN--------------GISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIG--------------ESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVTQQNAALVEQVSAAAAALERQTEDLQRSVQQFRL 513
6 -56.700IDP02076 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM3216 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  19  1MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLIDNFNDFIIAQQLMLLDEEGRW-----SQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIREARQQYLESRFRIL-QDIQSHNRQAAIQEMMTRTVQVQKVYKDKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAI-ADGDLTRHITTDYKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTSEATKLSAGAASVVKNNGEMMNQVTQKMR--------------VINDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRQLAQKSASSASEIRNLIE--------------DSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQALHLKELVNVFRV 513
7 -56.400IDP02460 gene: cheD; methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1675 [Yersinia pestis CO92]  ali follow..  21  1.MFKRMKVVTSLLLVLVLFGALQLVSGGLFFKSLQNDQENFNVLQVIRQQQSVLNESWV-YLLQTRNTLNRAGVRYMMDINHTGSGPTVKDLISSAKGTLSVAEDRFKRYEKIPQNSSQDPEGAKKLKQSYEEYFSALTELINLMETNKINEFFNHPTTSFQNEFEQNYNNYLTQNDGLYDSAVEDSNQSFSFAMGVVITVLVVVLVMMLLVWLGMQQILIHPLNHLIAHIKHI-ANGDLTQNIEVHGRNEVGTLAASLKHMQSELVTIVGEVRVGADAIYSGASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAENARQASQLALSASETAQKGGKVVADVVQTMH--------------EIAGSSQKIADITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLID--------------DSVNRVDLGSVLVESAGETMGDIVNAVTRVTDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLEEQASMLTQAMSVFVL 517
8 -56.300IDP02090 gene: tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor [Salmonella typhimurium LT2] STM3577 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  22  1..MKNIKVITGVIATLGIFSALLLVTGILFYSAVSSDRLNFQNASALSYQQQELGGSF-QTLIETRVTINRVAIRMLKNQRDPASLDAMNTLLTNAGASLNEAEKHFNNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKADNYAAYGNLDAQKAQDDMEQVYDQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQRVLLRPLQRIMAHIQTI-ADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVDNVVSTMN--------------DIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKVLIE--------------NSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFRI 516
9 -56.200IDP01089 gene: tsr; methyl-accepting chemotaxis protein I STM4533 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  21  1.MLKRIKIVTSLLLVLALFGLLQLTSGGLFFNSLKNDKENFTVLQTIRQQQSALNATWVELLQTRNTRAGIRWMMDQSNIGSGATVAELMQGATNTLKLTEKNWEQYEALPRDPRQSEAAFLEIKRTYDIYHGALAELIQLLGAGKINEFFD---QPTQSYQDAFEKQYMAYMQQNDRLYDIAVEDNNSSYNQAMWVLVSVLIAVLVVIIAVWFGIKLSLIAPMNRLIESIRHI-ASGDLVKRIDVEGSNEMGQLAENLRHMQSELMRTVGDVRNGANAIYSGASEIAMGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVDNVVQTMR--------------DIASSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIE--------------DSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRI 517
10 -56.000IDP01940 gene: trg; methyl-accepting chemotaxis protein III [Salmonella typhimurium LT2] STM1626 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  21  15.FLHHIRLVPLFSSILGGILLLFALSAGLAGYFLLQADRDQRDVTDEIQVRMGLSNSANHLRTARINMIHAGAASRIAEM---DEMKANIAAAETRIKQSQDGFNAYMSRAVKTPADDALDNELNARYTAYINGLQPMLKFAKNGMFEAIINHENEQAKQLDAAYNHVLLKAIELRTERARLLSEQAYQRTRLGMMFMIGAFTLALVLTLMTFMVLRRTVIQPLQQSASRIERI-AAGDLTMADEPTGRSEIGRLSHHLQQMQHALQQTVGAVRQGAEEIYRGTSEITAGNTDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGKASRGGQMVSGVVQTMG--------------NISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIG--------------ASVSLIEQGSEEVIAAGSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRVTQQNASLVEEASAAARSLEEQAARLTQAVDAFRL 529
11 -54.100IDP02252 gene: tsr2; putative methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1229 [Yersinia pestis CO92]  ali follow..  28  259........................................................................................................................................................................................SQATAGIHSLLTTSLVTLVIIIFISAGVIALITQRALTPLTHIQQAMDAISGSADLTQRLPIEGRDEVAQIARSFNQFADKLSLVMAQIRGTSESVRVAANEIAAGNQDLSGRTESAAASLQQTSAALEQISATVAQSASAARQANNAVFSASEDASRGGDVITKVITTME--------------SIEKASGKIGDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRILAQRSAQAAKEIKALIE--------------STVSSVASGSSQVRQASNAMTDIVSSVSDVTTIMSEITNAADEQMRGIHEINSAVAQLDTMVQQNAALVQESTAASAALQAQAADLTDTVNQFKI 595
12 -51.300IDP95064 methyl-accepting chemotaxis protein, partial [Campylobacter jejuni] AGM39603 [Campylobacter jejuni]  ali follow..  22  2.......................................................................................................................................................................................................................................................GSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQAALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHIANSINASLRNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSNAHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQLADHTS..................... 281
13 -46.700IDP01957 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM1657 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  23  2...................................................................................................................................................................LRNISVRTCIILFMVCAFLLVDTLQIAFLHDLPILITCNIIYLISALLLWWYMTCYLVVPINTVKKSIEEV-AAGNLSIHISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASIDEMAASTKNNADNTRMASIQADCATQCARKGGELMVRVTENMR--------------SITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVAGEVRNLAHRSAEAAKSIKALID--------------VTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRL 357
14 -41.000IDP01046 putative methyl-accepting chemotaxis protein STM3138 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  1......................................................................................................................................................................................................................................................................MFKKVLGLRHWNNNVVKIPPPAAESGANASDVVVDTPELCQKILMGISTIDIIRNAIIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISKEVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNIVKVDHVIWKMEVYKLLLNKDINSKITMHDQCR.................. 273
15 -36.200IDP91610 gene: ECs4554; EspB protein [Escherichia coli O157:H7 str. Sakai] BAB37977 [Escherichia coli O157:H7 str. Sakai]  ali follow..  12  27.........................................................................................................................................................................................................................................AASALSIDSSLLTDGKVDICKLMLEIQKLLGKMVTLLQQQAVFESQNKAIEEKKAAATAALVGGIISSALGILGSFAAMNNAAKGAGEIAEKASSASSKAAGAASEVANKVKATESVADVAEEASSAMQKAMATTTKAASRASGVADDVAKASDFAEDLADAAEKTSRINKLLNSVDKLTNTTAVAVTSLAEGTKTLPTTISESVKSTHEVNEQRAKSLENFQQGNLELY--KQDVRRTQDDITTRLRDITSAVRDLLEVQNRMGQSGR.............................................. 309
16 -14.600IDP04664 sensor histidine kinase/response regulator [Bacillus anthracis str. `Ames Ancestor`] GBAA0996 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  5...AKFSIRYKIMAGYLVIILFLLISFIMLNNQISNLQKSRNFIIDHDFKVLNLTNQVEKDLLTIENKAKGFITSNN---------ANYLQSLNSAERDYEKHYHDLFSLLENPSQQEKLKEINGNITNWMNKEIHPLIANHNSNKIQEIDT-------TEIQSLQSQLTDFRSTEEQLTKKRAAQLDTKNNKLELWLYSLLFLLSCISIIVSLYISNSITKTIKNVIQAIKSISSKEKITERIHVNTHDEIKDLAHTTNHLLDEISK--EWLQTEIAELILMYQGVSSIEMLGNKILSGQKTQTSCGAFYVREEYEETVYYVKKASFADQGFDIGKQSIKMGEGFIGQSALELRDIPEEFRYVTTGLLEIRPKNLLVIPVLDEVIAVMEHQDLINLGLTIHSIMGRM----------RIQTLLHESQAMTEELQVQSEELQTQAEELQMQAEELRTTNEQLESRTEEAEQKTADLQITKLELEEKASELLRSSKYKSEMSHELRTPLNSINHLSDDEIELATVIHSSGKDLLTL---INDILDLSKV 560
17 -14.000IDP04182 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VCA0238 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  9  194........................................................................................................................................................................................EAALDALSNVRSVITSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTAL-EQGRLDHRISISGPDELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKKHQQKEFFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRH-RLFHPALTEL-LLGEIWQAVVRQASLLTHAQQVELT-----------TPAQGEWQTQLCYTDCDKLLMVIRILVDNA------LRYDPTQQPIGLNLELDEEAWRVQLVDQLSVIFERYFRAENGKRYRLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTF................ 537
18 -13.800IDP04672 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1482 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  273........................................................................................................................................................................................QPVNEAMLVLKDYYVYALIIVFLVIILLSFYYSKIIVKPLIKINRVTKKM-ANFDFSEKLPVTADDEIGGLSGSINTLSVNLKDRIDRLNVANTKLQQDIERERQL----------EKTRKEFISGVSHELKTPLSVIRSFAEGIKDGVSKDTTY-----DVILEETENMNRLIVEMLE----LAKLESGTYKLDSIGELIQQVYTKLLFSMEEKHLQVN---DVNSSIFVKANRSR------------IEQVVVNLLSNA------IRYTPEGEKIQVSVITMEDTVKIEIENTLEKIWDRFYRLDASRSRHTGLGLSIVKNILDLHH................................... 578
19 -13.300IDP04331 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2181 [Clostridium perfringens ATCC 13124]  ali follow..  12  167........................................................................................................................................................................................QAIEEASALIKDFYKYIILIVIVIGLILSYVFSNLISKPLVKLNKSAKKM-SAMDFSEKCDIEREDEIGNLAKTLNFLSKNLSNALDDLKIKNKKLEEDIEKEREL----------EKLRKDFIAGASHELKTPIGIISGYAEGIKDGIVDHKDQGV---DIIIDEAEKMNKLVMDMLE----LSKLEAGKIDLHSLTELTEEVLVKNSVDINKNNLTVVKNYSPTEDLYVQGDDFK-----EQVLTNFVTNAIKYSEPNNQIIIDIKPVEEDKIYFSIENTGAPDSDINKIWTQFYRGDTSRNRGSRSTGLGLSIVKNL............................................ 472
20 -13.100IDP04691 sensory box histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5067 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  297........................................................................................................................................................................................QPVDEAVQMVQDYYIYIIAFVVVLIFLASFYYSKQIAKPLLKINDTTKKI-AHLDFTEQIPITSKDEIGDLSKNINTLSNKLNSHIGQLEQDIEKERKL-----------------EKTRKEFISGVSHELKTPLSIMKSCISILKDGV--AEHKKEYYFQAMEREVDKMDTLILDMLE----LAKFESGTYKMKYIDTVMEAICEHLSVEIEKKELRVHKHIGP----EVVANQGR------------IEQVIVNF---ITNAIRYTPNKEDIIISTIDEKDHIKVCIEN-EEQLDKIWDRFYRVDAARQRSTGLGLAISKNILELHDAEYGAENTEDGVL...................... 608
21 -12.700IDP92066 gene: GAPDH2; apicoplast glyceraldehyde-3-phosphate dehydrogenase 2 [Toxoplasma gondii] ABO93620 [Toxoplasma gondii]  ali follow..  12  200........................................................................................................................................................................................................................................DAASSGTCSESSDAAFAPEFSDLRDLFFGACDAT---------VSPDDLPSVPEALEKLAGLESDVQARGDQLDEKEKVVAEYLVAAQEAAVRHEEASRAFEDAKRNKK----------------ENLAAAAEKAALEAAAEYADLTTAAQLVTEEAEQESAKA------LADAVAAGDLRFAINQKIVNEAGPEARGKVPRALLAPK--------------HVRISDPAAGRVLKIFFHNNFAPFEDLPCAALHADAHLCRQHPRCVVQVEQSGDEVLQRCLLDEAYLALLTKTPDFCAAAPAEAETGLGNSAA. 469
22 -12.600IDP04495 sensory box sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC0622 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  392........................................................................................................................................................................................KEAFARVRQLEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQL---ANKLKDEFLATTSHELRTPLHGMIGIAEALISGANPISAAHKYQLDIIISSGQRLATLVDDLLDYHKM--DIQRCAVDLSSATRLVLELSHHYNLIG-NA-IKYTSEGDTGQG--IPAEQLEHIASRYRQGAGSISRQLIELMHGTLYVSSQPMVGTASEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELV..... 817
23 -12.300IDP04343 two-component system sensor kinase [Yersinia pestis CO92] YPO2916 [Yersinia pestis CO92]  ali follow..  10  18......SLRQLVLMAFLLVLLPLLVLAYQAYQSLDHLSTQAADINRTTLADARRSEAMTSVALEMERSYRQYCVLDD---------ATLATLYQHQRKQYTQMLVAHAPILPDARYYQTLQGLLNQLTDI-----------------KCKNSGPDKEASILLEQFSRSNAEMVQATRDVIFSRGQQLQKDIAERGQFFGWQSLLLFLVSVLLVVLFTRMIIGPVKGIERMINRLGEGRSLGNTALFKGPRELRSLAQRIIWLSERLAWLESQLRHISHELKTPLASMREGTELLADEVQDQQEVVAILDHSSRHLQQLIEQLLD---NRKLADGPGEPEHVDLAEMVGNVISAHSLPARAKMIRTET-RICWAEPTLLMRVL---------DNLYS-NATIWICSRQVNDRVQIDVANTGAPIPT------SEEIMIFEPFFQGSHQ----------------RKGAVKGSGLGSIAQDCIRRMQGDLQLVTVDYAAVCFRIEL............................................ 476
24 -11.800IDP04012 gene: virJ; sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2355 [Clostridium perfringens ATCC 13124]  ali follow..  13  163........................................................................................................................................................................................SKEYLELRDLMSNIKFIVSITFLLILIFTYFLFERIINPLNYIKNSFKRI-GDGDFKINLKVNSKDEIGDLACGVNKMANKIEEQIEKINEEKEKVLTL-----------------EKTRTEFFNNITHELKTPLTNISGYAQIMSEEDFHDNDFRKFALERINKESKRMHELIVSLIEISKNKSDIEGGEIENVNLKTLIEDLCEDFKVKGDKQGICISNNLED---IEFMCRE------------DEIRRIIINLLDNA------IKYSIKGSEIEISLFKDKEEKHIEIEEGVEKIFEPFYRENTKKSRENGLGLYICSELVKKYG................................... 463
25 -11.700IDP02181 two-component sensor/regulator [Yersinia pestis CO92] YPO0256 [Yersinia pestis CO92]  ali follow..  13  288..........................................................................................................................................................................................AWEALKPALYQLPFALAILLLLTSVLSLLLRYYLAIPLWNFINIIGAT-GPQAMEPRLPINRIDELGHIARAYNNLLDTLNEQYDTLEMKVKERTLALAEAKRAAEQAN------RRKSDHLTTISHEIRTPLNGALGAVELLQNT--PLDAGQMRLAETAHQCSLSLLAIINNLLDFSRISGQMTLSLEKLDQAMLTIHSQALSKSLILVNLLGNAVKFTPQGRGCGIDVQHQQTIFQPFMQTSDHIADNLAKMMGGHLTVFSEPGQGSC........................................................................................... 607
26 -11.600IDP04438 gene: cpxA; two component sensor kinase [Yersinia pestis CO92] YPO0073 [Yersinia pestis CO92]  ali follow..  15  151........................................................................................................................................................................................SPQSDFINLMFDRPLLLLIATMLISAPLLLWLAWSLAKPARKLKNAADDV-ARGNLKQHPELSGPQEFLATGASFNQMISSLDRMVVAISDISHELRTPLTRLQLATALMRRR-HGEGKELERIEMEAQRLDSMINDLLVLSR--SQHKNELHREPIKADELWSDVLENAQFEAEQMGKTLVV--PLFCNPAALDSALE---------NIVR-NALTDEARSGGTGLGLAIVETAVSQHRGWVKAEDSPLGGLRLIVW.......................................................................................................... 450
27 -11.600IDP04132 putative two-component system sensor kinase [Yersinia pestis CO92] YPO2997 [Yersinia pestis CO92]  ali follow..  14  156.........................................................................................................................................................................................................IWMGVLGGLFFSTLLAWNLTRPMRQLRVGFERV-AQGDLSVRLLRRRHDELTEVARDFDSMAERLQALVSALHDVSHELRSPLARLQLAIGLAHQNPDNVDNALQRIEHESERLDKMIGELLALSRAENHSLADDDEYFD--QELVKVVVNDARYEAQLLEVAAQSEYTVKGNAELMRRAIE---------NIVR-NALRFSASGQDQGPG--VEENKLSSIFDRVKSAMSGITHKVILAHGGQVEARNGEQGG............................................................................................. 437
28 -11.500IDP04694 gene: yycG; sensory box histidine kinase YycG [Bacillus anthracis str. `Ames Ancestor`] GBAA5714 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  177........................................................................................................................................................................................EDVYKQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEM-AKGNYSRKVKVHSHDEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDIATDRKGDIILLNDPAEKMLNVSRELDQSVLEVLGIQEEFTLDHLYEEPDSVLLDFSTRNEPYILR-----------SFSVIQKETGKANGLIAVLYDVTEQERI-------ERER-----REFANVSHELRT-------PLTTMRSYLEALTDGA--------QDPNIAPQFLTVIQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVSFKRSFSKKSRFIDMDTDKITQVLYNI.. 506
29 -11.400IDP04397 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA3230 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  141........................................................................................................................................................................................SRLSSTMNTLIVLTLISFPLLILIAAVGGYFITQRAFRPVQQMSDSASKIGDGKDLSKRINLKGKDEMYHLAQTFDKMFERLETSFESTSDASHELRTPTSVIISQCEYALSQRNNPKEMEESLEVILKQMSALISQLLLLARADQGNDNTFQFECINMSELTEIVVEELSLMVQEITTHIEEDLFIKADQTLMMRLL---------MNLLT-NATVHMQLFRDETNIIGKVSDNGIGISE------QHITKIWDRF----------------RVDAARTSSNIGNTGLGSMVKWIVELHGGEITVESGLGEGSTFTFKL............................................ 451
30 -11.300IDP04189 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0225 [Clostridium perfringens ATCC 13124]  ali follow..  12  166........................................................................................................................................................................................TEAYEILRNTLTIFIISGLIAIVIAIFLINTFAKELVSPLMILKQKSKNI-SEGKFKEELHITSGDEVEDLANTFNIMSENLDKYINEIKSA------------------------KLHQKKFFDNVSHEFKTPLTAIIGFSEIIPKLNDK--EKIVQSSALIEKEGKRLLNLVEEILLLAKSNKNTFEIEYTYIDVKSLIEDCLKILKIKLDNYDIKVYRNYES---FFIYGDHDKNIIDNAIKYSGCETLSISTKRSPNKMEVIIEDDGTGFIIKDEYVNPKGNGLGIKICKDIMQSQNYGFNIESELDVGTKVTLSF............................................ 461
31 -11.200IDP95472 sensor histidine kinase [Listeria monocytogenes 10403S] YP_005962624 [Listeria monocytogenes 10403S]  ali follow..  14  156........................................................................................................................................................................................SGTEQVIGTINRYMFYTILLSITVALILSAILSKLQVNRINKLRAATKDV-IQGNYNARLKENNFDEIGALAIDFNKMTQTLETSQEEIE------------------------RQEKRRRQFIADVSHEMRTPLTTISGLTEGLVNDIIP-KSETDRCIALIDTEARRLTKLVNENLD----YEKIRSNKIKLQNGKEFLELIKEQLDYVASEKGNTIT---AIDKDMAIYADYDRNIVKNSVQFTENGQITLTGTQDYKESVLTITDTG--KADMSRTNTAFGESGIGSIVKQLIEYHDGSITVTSEPNKGTSFTIRL............................................ 468
32 -11.100IDP01908 gene: ssrA; sensor kinase [Salmonella typhimurium LT2] STM1392 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  16  287...........................................................................................................................................................................................NRILKIILQQIPFTLTALVLMTSAFCWLLHRSLAKPLWRFVDVINKT-ATAPLSTRLPAQRLDELDSIAGAFNQLLDTLQVQYDNLENKVAERTQALNEAKKRAERAN------KRKSIHLTVISHELRTPMNGVLGAIELLQTTPLNIEQ----------------QGLADTARNCTLSLLAI------INNLLDFSRIESGHFTLTALLPLLDQGPAQSKKLSLRFHTDSIR------------LRQILVNL---LGNAVKFTETGGIRLTVKRHEEQ--------------LVSDSG--KGIEIQQQSQIFTAFYQ--------ADTNSQGTGIGLTIASSLAKM............. 589
33 -11.000IDP01736 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5503 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  154........................................................................................................................................................................................TGEKEVLTNVGWTFLMTSLCLVAAGIFFAIRLAKSLHKPIDQLRQMAHRL-ANGDYKSKIELNEYVEIAQLSASFNAMADGIELHIKQLKEE------------------------KEKQKDFLDRITHELKTPLTAIIGYVDLIPKL--KAKEDVKESLRYVAVESERLLSLVEELLKSSKYGTSTFEISPTVVNIKELAEEAVSIVKPRLQKFEIEVINELTD----HVVADFDKNVLDNAIKYSDATQIRMNVIVNEREAKVFVHDDGIGIDEGVLAEWSSYGHGYGYICQEIMDKQGGSMRIESSEEIGTTIFITF............................................ 460
34 -11.000IDP04247 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1402 [Clostridium perfringens ATCC 13124]  ali follow..  13  161........................................................................................................................................................................................NPKIGFKIFVYIMISLYIFIFTMSLILYSKLTSKTFTKPLDKLMNGVRKL-SLGDYSTRINIEKNNEFEELGEAFNNMASKIEEEKKLVRNIAHDLKTPLSSIIGYSNIIKNNPDIEKESLHKYISVIENNGERANEMIMELFEFYTLQSSEFILHKKYQDLSEFLRNLIADYIYLLEEKDFDFD-LEFDNKRLERAI---------GNLII-NSKFLISLKKEGDKVKIIVSDDGIGLSE------EIKKHIFNPFVREEKS----------------RNSKKGGSGLGTISKEIVEKHGGTIYLSDGPLKGCNFVIEL............................................ 475
35 -11.000IDP06113 histidine kinase sensor protein [Helicobacter pylori J99] NP_222872 [Helicobacter pylori J99]  ali follow..  7  120..........................................................................................................................................................................................LYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRF-AQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESLRSIMHELRTPITKGKILSS-----MLKEELSCKRFSSIFDHLNMLIEQFAR-------------EQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDIEADFELFAIAL---------KNMID-NA-IKYSDDKNKSKP---LKEDFEKYLQPYFKSSN------PSQAHGFGLGMYIIKNALEAMGLNLSYHYSNGRICFTIHNSFYDLEADNEELPPPRKFERGEGNEGNRK......................................... 437
36 -10.900IDP04241 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1112 [Clostridium perfringens ATCC 13124]  ali follow..  12  274........................................................................................................................................................................................KKITEELIPIIGSTLLIVIFCLIVVVILINILSKALSRRILLLKDKAEDVS-KGNFNNPIFTEDTDEIGIVTNSFGHMTRDLNDMINKV---------------------KIELEKKATELKALQAMINPLYNSLSTIKWKAIR-------------EGNDDISDITGYLAKFYRTSLNNGQDITDVKSEIDNIKSYIEIQKRIDEKG--FILQPIVENA---------------KHGIDCNQGKERGKII--VEFQEDEDSLIFKIYNSSNNNDINSIEEMPGKGYGIYNVKERIELYIECNLECSLVENNYICIALRL............................................ 566
37 -10.900IDP04673 gene: resE; sensor histidine kinase ResE [Bacillus anthracis str. `Ames Ancestor`] GBAA1498 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  163........................................................................................................................................................................................QVPIQGMERTTDFIFLSAGIAIILTTFFAFFLSTRITAPLRKMREVAFEV-SRGKFDAKAPMVSQDEIGELATALNQMGKQLKFNMNALQQEKEQLASILSSMAD--------TLNQEGEVVVINPPAEHFLQVWQEEKEIELSKKLPSE---------VELFHLVVESEQQQVVGINLQKGNYVPLYNQTKIRGAVA-VLRDMTEERRL-------EKMR-----QDFANVSHELRT---------------MVMLQGYSEAILDDIVQTKEEINEFVQIIYDESVRLGKLVNELLDLARMESGNVELHIGEVDIHPFVEKIGRKFQGIAKDTVDFKDSIEQYPFDADRMEQVLTNLIDN... 492
38 -10.900IDP04430 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA4921 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  171..................................................................................................................................................................................................PILFVSLLLLAILLIGLLSYLVSRSVIKPIFVLKDATGKI-KEGNLDFHIPVTSHDEIGQLNQGFEEMRKKLKESIEMQTQY------------------------EENRKELISNISHDLKTPITSIIGYVEGIKDGVANTPEKMDKYLTTIHTKARHMDTLIDELFLFSKLLNRVPFQFETV-ELNMFMQELIEEMQMDLSKEGIEVN-TADCEKINRVISNLIHNSVKYMDKEEKKIT--VTVSSDNNKVIVKVMDNGSGIESDTLPYISTGGSGLGAIAKQIIEEHGGNIWAESELGEGTSIFFSL............................................ 476
39 -10.800IDP04191 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0554 [Clostridium perfringens ATCC 13124]  ali follow..  11  291........................................................................................................................................................................................DFINADIQSLRKEMTIIGLLFTLVVLIFSYFLYSSIKVPLYNLLNKMKRVS-EGDLKVLVNDTYEDEIGVISDNFDSMLKRVNELIEKT---------------------LQEVEKRDLEIRMLQAQINPLFNTLNSLKWTALM-------------NQDYTVSEGLSSLAELLRNTIIDKNELVTIREELENIKNYVVIQKEVDELL--FILQPIVENS------HGI------------DENKENQKII--IKIMSEEENILISIKDNGKGFNSKEKVKDNKSGIGWNNVDERIKLTLGYGTTIYSEVNKGTIVKIVIPKSI........................................ 583
40 -10.800IDP04165 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1521 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  309........................................................................................................................................................................................WPFLKAYVTNILEVGIITLFLLVISGLFVYRGSRDLFRPIERIHRVVKMVQGKNQRIGQIGLDDKHELAQLAKQFDNMLDQLQQRNEEIVQAAHELEAKVQSRTASLQEKTAQLEHHIALLNQTRNKLVV----HEKLAALGELTAGIAHEINNPTA----ILGNTELIRFELGADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQHVNPIIDES--------ITLVKTGSKK-HNSVEVNRHQLLQILVNL---QMNAIHAMNGKGRITIRSEDWVEEGQNRGAVI-----HIEDQGCGIKTTKREGTGLGLSVSQSLLS-GEIKVQSELGVGSTFSIFLPSKNEAKLRETLLLQ... 677
41 -10.700IDP02394 gene: phoQ; sensor protein PhoQ [Yersinia pestis CO92] YPO1633 [Yersinia pestis CO92]  ali follow..  9  174...................................................................................................................................................................................VVDTIPQELQRTDLVWNWFSYVLLANLLLVIPLLWLAAYWSLRPIKALASQISQLE-KGERE-QLDENPPRELQSLVRNLNILLMNERQRYTKLADLTHSLKTPLAVLQTTLRSLRTGKQTTIEEVPIMLEQISRISQQIGYYLHRASMRSEHNVLGREIHS--PALLDSLYSALNKVYQRLTLDISPEVTFLGEKNDFMEVMG---------NVL--NACVDTLRPG-QGLGLSIAAEIIEQYQGKISITESPLGGARMMVT.......................................................................................................... 474
42 -10.600IDP04680 sensor histidine kinase, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA3066 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  55.....................................................................................................................................................................................................MLIIFLLSLLVLAFVFSRSINTVLNKINILNQTIRDLASDKKIPNIIDVKSDDEMGELIKSVNLLIERTTYRELELNKLRHDINTPLTAVRLQLYYLEGEYKGQAPVLESLYEQIQYISDLTNEFNMQSTETLENTYIVHDEVN--HNLIETMIKKWSYLYSIHKNPQDKELIWNSNELWIQRLFNIFQNVLKHSKAKKLKIIIDDINSKGTGLGLKNIEDISKTLQSNSEGTMFSFENTQKNI........................................................................................................... 333
43 -10.500IDP04484 gene: barA; two-component regulatory protein [Yersinia pestis CO92] YPO3381 [Yersinia pestis CO92]  ali follow..  14  179.....................................................................................................................................................................................................STLLLLFCMCVAILFAYRLMRDVTGPIRNMVNTVDRI-RRGQLDSRVEGHMLGELDILKNGINSMAMSLAAYHEEMQQNIDQATSDLRETLEQMEIQNVELGLAKKRAQEASRIKSEFLANMSHELRTPLNG---------------------VIGFTRQTLKTSLTPTQTDYLQTIQRSANNLLCIINDVLDFSKLEADKLILEAHTAHEKGLELTVLGDAMR------------LQQIVTNL---LGNAIKFTEEGNIDILVVVKAIASQQVTLM-------EIHDTG--IGISESQQAQL----------FQAFRQADASTSRRHGGTGLGLV-ITERLVKEMG.... 496
44 -10.500IDP04543 sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar El Tor str. N16961] VC2453 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  178.....................................................................................................................................................................................................AGLVLVIGILLSGVFASRLMYDVTRPITHMKNMVDRI-RRGHLDVRIEGKMHGELDTLKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNG---------------------VIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALEATSAHEKGLEITVVGDPLR------------IQQVLTNL---VGNSIKFTERGNIDVSVEMRALRDDVIDLQ-------MVRDTG--IGISERQQAQL----------FQAFSQADASISRRYGGTGLGLV-ITQKLVSHMG.... 495
45 -10.400IDP04007 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1319 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  16  133...............................................................................................................................................................................................QAIDRADNLLFVFMLGGFALYCMFLIWFLSRRLRELERVTHDF-ANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSTNAIAHDLRTPIFRIQWQAEVLAESQAKQQQQVASIIEDTEEMETMVDELLYYA-KLEHPESDIQSQYLEVNQWLADFIDEQSHLDADPQLLTRALVNLIRNAEKYAAIHDNGPGIEEQPHIFDAFYSTDSSRQSGFGLGLAIVKQIMARHQGEVTLTKSP................................................................................................................... 416
46 -10.400IDP91721 gene: MMRN2; multimerin-2 precursor [Homo sapiens] NP_079032 [Homo sapiens]  ali follow..  9  249.................................................................................................................NQSLHSLTQAIRNLSLDVEANRQAISRVQDSAVARADFQELGAKFEAKVQENTQRVGQLRQDVEDRLHAQHFTLHRSISE----------------------LQADVDTKLKRLHKAQEAPGTN-LVLATPGAGARPEPDSLQARLGQLQRNLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSESDETFDQISKVERQVEELQVNHTALRELRVILMEKSLIMEENKEEVERQLLELNLTLQHLQGGHADLIKNCQKLYLDLDVIRGQRDATRALETQVSLDRQLDGSSLQALQNAVDAVSLAVDAHKAEGERARAATSRLRSQVQALDDEVGALKAAAAEARHEVRQLHSAFAALLEDALRHEAVLAALFGEEVLEEMSEQTPGPLPLSYEQIRVALQDAASGLQEQALGWDELAARVTALEQASE. 670
47 -10.300IDP04463 gene: narR; nitrate/nitrite sensor protein [Yersinia pestis CO92] YPO1959 [Yersinia pestis CO92]  ali follow..  9  1MKRYLTPLVNQIALLMILLGMLGLAGMVISSWMAQSIQGNAHAI---------------NQAGSLRMQSYRLLSMIPLDSNELSYLVALEQDKTS---------HDLQQALLREGLMGQYQQIERYWQDTLKPQLQQ---------------------AKHPDEVAASVADFVHQLDALVLAIDHKTEQRLLQVTLIPLVFSLLTLSLLLAMIYYLRRRLLRPWLKLISMANAI-GRGDFSQRYTLDQRDEMGMLGTALNRMSQELSDLEQRVVNKTADLQQKNQVLAFLYHSSRQLHTHQPLSIEQLQALTTLENVQICLYENHLYRDHVNHNADAEYLMPKNRPASLTISGPVRPISHPELWQSLSWSLSDKLGQYGLLQQLVDMLVEQ-----LTSTLALESQAKHQQ--LLLMEERSAIARELHDSIAQISCLQMQTPDLPENSNLLIKQMRDELNIAYRQLRELEAALQALVNEFSERAGLSITFKYQLPPDQ-VPNHQAIHMVNIVREALNNIYKHARASEATVNVHLEQGDVVMSIT.... 537
48 -10.200IDP04428 gene: phoR; sensory box histidine kinase PhoR [Bacillus anthracis str. `Ames Ancestor`] GBAA4832 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  152........................................................................................................................................................................................EPLKDVHQKTWGLLIIGFVIACLVVVFLGMKITGQYIRPIESVTKVAIEL-AKGNYKARAYESHSDETGMLSKAINILARNLQEMTLEQEMQQDRLHTLIENMGS--------LIDSRGYINLVNRSYKETDRLYYESFHHTE----------------IELVEEIFMTEVKVRKQMLLPLGIGAPIIGTNHEWKGIVLVFHDITELKKL-------EQMR-----KDFANVSHELKT-------PITSIKGFSETLLDGAMD-------NKKFCEHFLHIILKESERMQGLIEDLLDLSKIEQQGFKLSMGTVDMKGLLEDIHMVLDNKAGEKEISLQVNTLKRVSVIGDPSRLQQIFINL.. 484
49 -10.200IDP04104 gene: rstB; two-component regulatory system, sensor kinase protein [Yersinia pestis CO92] YPO2309 [Yersinia pestis CO92]  ali follow..  14  123...............................................................................................................................................................................................HQMRLLDLALLILIGLSLALPVFLWMRPHWKDLLKLENAAQRL-GSGHLDERTHFDPTSSLSRLGVAFNQMADNINTLIVSIDGIAHELRTPLVRLRYRLAMSDNLTESEQQALHHDIGQLEALIDELLTYARLDRPQVSLNLEPIDLPAWLTTKIMDIRSIHQEREIELDIPHRGD-FGAVDLRLMERVL---------DNLVN-NALLDPSRTGGCGLGLAIVHSIALAYQGSISVNTSPLGGASFRFS.......................................................................................................... 411
50 -10.200IDP91681 LAMC3_HUMAN [Homo sapiens]  ali follow..  10 1067..................................HLLPGAREAFLEQMMSLEGAVKAAREQLQRLNKGARCAQAGSQKTCTQLADLEAVLESSEEEILHAAAILASLEIPQEGPSQPTKWSHLATEARALARSHRDTATKIAATAWRALLASNTSYALLWNLLEGRVALETQRDLEDRYQEVQAAQKA---------------------------LRTAVAEVLPEAESVLATVQQTAPYLALLASPGALPQKSRAEDLGLKAKALEKTVASWQHMATEAARTLQTAAQATLRQTEPLTKTATSASQLHQEARAALTQASSSVQAATVTVMGARTLLADLEGMKLQFPRPKDQAALQRKADSVSDRLLADTRKKTKQAERMLGNAAPLSSSAKKKGREAEVLAKDSAKLAKALLRERKQAHRRASRLTSQTQATLQQASQQVLASEARRQELEEAERVGAGLSEMEQQIRESRISLEKDIETLSELLARLGSALNETQWALERLRLQLGSPGSLQRKLSLLEQESQQQELQIQGFESDLAEIRADKQ. 1570
51 -10.200IDP04347 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2345 [Clostridium perfringens ATCC 13124]  ali follow..  14  276........................................................................................................................................................................................SNATKVPLLFKVSAFLVSLFLFIIAECVLYIKFKNLSSRMDSLVLAMEKVE-KGDIDVHIPLKDRDEITFIADNFNKMCEKLNDHIRKS---------------------LAELRQREAEIVALQNQINPLYNTLESIRMKAIC-------------NGDKEVGKMLYSLAFLFRSQVKGNLIV-SIDQEIKYCNKYLELFKECEEDL--FTLQPLIENYEVIDNGRG--IPKEKLDDINRRIRECDHSMLNVHERIKIKYGEPYGLTVTSEENKGTNMI.................................................................................... 569
52 -10.100IDP04659 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0272 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  184.........................................................................................................................................................................................IPDGVVMYDTQEGPFPFLIGVLVFIFSFFYITKRKMKQIEAMAEGVKEI-EKGNLAYRIEKKGEDEIASLTENINNMAEELMNNIEK------------------------ERKLEKQKNELITNVSHDLRTPLTSIMGYLRLLRDSKYENKEQHDEYTRIAFAKSEQLKNLIEDLFEYTKL--VLEKQEVCVNELLE-LVPQAEEHGLFVKKFPEERAYAAIDSEKMVRVFDNLLMNAIKYSKDDGEIK--VSLQRQRWEIQIVIANHSEEFTREELASRVTEGSGLGAIAKSIVELQGGSIRAEYKDG..................................................... 488
53 -10.100IDP95462 sensor histidine kinase [Staphylococcus aureus subsp. aureus USA300_FPR3757] YP_494944 [Staphylococcus aureus subsp. aureus USA300_FPR3757]  ali follow..  14  153........................................................................................................................................................................................PDIGETFSEFRTFLAVLLMLLLFISISLVIASTYSIIRPVKKLKLATERL-IDGDFETPIKQTRKDEIGTLQYHFNKMRESLGQV---VQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQINDIYTITTQLSGLTTEL--LLSELDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKSLIILA--NFLGNQRLLHQAL---------SNLLI-NAAIDIALQHSHNNIIFTISNDGSPISP------QAEARLFERFYKVSKH--------------------DNSNGLGAITKSIIELHHGTIQFTQSNEYVTTFTITLPNN......................................... 455
54 -10.000IDP04352 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0584 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  179........................................................................................................................................................................................SFLENMLLKLMKQFLIISVLTIILTTISVFIFSRVITEPLIKMKRATEKM-SKLNKPIQLGIKRNDELGSLAKTIEDLSSELTYMKKELASVAHELLTPLTYMKGYAKVAKRDSLTKEEREEYLQIIEDEVTDLVQDL--MLVQLEQHQFVIKKQKVLLRPFLERMVEKTKTTLTNLHVYCKDDLEVCIDERRMEQVM---------LNLLH-NATITIRVLAETNSFTISVQDEGEGIPE------GDIPHIFDRFYR--------VDKSRTR--------ATGGKGIGAVAKEIVELHNGSILVTSKLDVGTNFIIEL............................................ 484
55 -9.950IDP00013 LPXTG-motif cell wall anchor domain protein BA_3254 [Bacillus anthracis str. Ames]  ali follow..  8  42......................................................................................................................................................................................................................................................EIKQHKQGLDAKLQQHKENVDQTLNELNKVKENVDTKVNELHERKQVADEKINEIKQHKQELDAKLQQDKQIAEDKIAEIKEHKKQVEDKVAEVKEHKQNIDNKVNEIKEVDEKVNEMKQHKENIDQKVNELKEVKKQVDEKLAELKKAKQTAEDKLAELKENKPNTGNTLEELKKIKSNLDSLSANLELAKQDVKNKLAALQEARQDLINKINEIKQSKQTVSDDLSKKKQDLNDFKHTEKKIDDKLAEIHTTKQNIDNKINEVSQSKQTETKTGNNARELPNAGSKQSNNMALGMLS... 353
56 -9.760IDP04667 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1313 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  152........................................................................................................................................................................................KSIKDLIYDMGLILAPLALAITLLTIWIGRKIIIAITRPLSQMERVANHL-ATGDFSERITISSEDEIGRLGKAFNKMANSLETEDVKLANVSHELRTPLSYIKGYSEAILDGVAKGPQQEKVTQLIHKEMQRLVHDLL-DLAQLEGEHFPLQKQPIVFSQLIEDVLDTYEIKFIEISTNLNPEIIVMIDEDRMQQVL---------HNVLD-NADIMITLRQIDDYCELSIKDTGIGIDT------EHLENLGERFYRVDKA------RSRQHGGTGLGLA---------IVRQIVHIHDGQWQIESEKGNGTTVSIKL............................................ 457
57 -9.660IDP92003 sensor histidine kinase [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002775 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  15  39.....................................................................................................................................................................................................LLGMTIVASLVGAGISLFLLLPVFTSLGKLKEHAKRV-AAKDFPSNLEVQGPVEFQQLGQTFNEMSHDLQVSFDSIAQLSHDIKTPITSIQATVEGILDGIIKESEQAHYLATIGRQLNKLVEELNFTLNTARNQVETTSKDSIFLDKLLIECMSEFQFLIEQERQVIPESARIEGDYAKLSRIL---------VNLVD-NAFKYSAPGTDEGQGIA--VETSRNMKTGGHGLGLAIARELAHQLGGEITVSSQYGLGST........................................................................................... 336
58 -9.610IDP04515 putative sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2673 [Clostridium perfringens ATCC 13124]  ali follow..  10  276......................................................................................................................................................................................................NRYLWIIPIVLVIHFIVKFIRKYDGLDTVIKGIEKVK-KGDTDIEIKDNDDRQIRELADDVNDLRLGYKELVEE------------------------GIKNEKLKTELISNVSHDLKTPLTSII-NYVNILQLNNIKEEERKEYIEILDKKSQTLKKLIDDLFEVSKMSSELFKYNIDIIQLVQCIAEVEDVYSEKEIEFKINGPEE------CMVKIDPQRMTTNALKYSLEKTRVYVEIKDLENYVEISFKNISSYALDFDEKDSTIEGSGLGAIAKTIVELHNGKFRVECEGD..................................................... 565
59 -9.430IDP04542 putative two-component system sensor protein [Yersinia pestis CO92] YPO2000 [Yersinia pestis CO92]  ali follow..  14  153........................................................................................................................................................................................TPYMGTLNEFTRTLIVITAIGVLFVALLGFVIARIGMRPVNKLSEQAQHLAP-GNHGQRLDTLTPDELQKLAVAFNGVLERQEIAWRQLADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEEMTSIVNDML--LSHAQAGEHATQLTDVSLREETYKTTEYVEPSFAELSIHVEGDITARIDRRLFHRSL---------ANLLE-NSTVKVTISRENNLASIAVANIGAPIAA------EHLNRLFERFYR--------VDSSRARSDTH------HGLGL-SIVRAVAIMHRGDVFASSQNGINT.................................................. 451
60 -9.420IDP04662 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0650 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  148........................................................................................................................................................................................ESIEKLVNGLTKQFIIAGAITFLLTVITIFLLSRLLTKPLLHMKHATEKM-SKGDLSVSLTTTRNDEIGELSSSIQTLANDLHYMKTELASVAHELRTPLTYVRGYADIALKETTSPEQRLRYLSIIKDEITNLVQDL--SLAQMEQHNFSIQVKEVHLHTFLTRISEKVNAMYKEVSFSCPPTLLVNLDEQRFEQVV---------VNILN-NAQIHISVIEENKRISITMEDEGEGIPP------EDLPHIFERFYR--------VDKARSR--------ATGGTGLGSIVKEIVELHGGNITVTSEVDHGSCFTISL............................................ 453
61 -9.280IDP04302 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2503 [Clostridium perfringens ATCC 13124]  ali follow..  12  156........................................................................................................................................................................................RNVDNFILNFFLVFLVIGLTVLAIGIILSYFLANSIVNPITELIKVSEQM-AKGNLKVRNKIVTNDEIEKLADSLNIMAEEIENR---ISSVSHELRTPLTSIKGWAITLNNDFETLKMGFDIIEKEADRLSNMVEELL-DFSKFVSGKIKLKYEEINLKEFIEYLRLYMNPRAEREHKGITEDFIIVGDKDRLKQVF---------INII--NAFKFTHENEKIDTGCGISKEELPRVKEKFYKGKNSICDEIIALHEGTLEIYSELGKGTK........................................................................................... 453
62 -9.230IDP04076 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA2213 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  18  145........................................................................................................................................................................................DSLQENLNMLKNVLVIASLLVLIPSFFAGRMLSKFILKPVNSLIQTMEHIQ-VRGIFKKIPLKSKDELHKMGSTFNKMIDLLHQNFEKVSDASHELRTPLTVIESYAKLLKRWGMKKQDVLEESVEAIYSEAVRMKGMTNQMLLLANSSADWSLETNE------DLVRLCQVTAEQLEKTYARNFRVITDEEKIVVNID--EQKIKQVLVVLLDNAMKYSKDSQKEKVFFSIQDYGMGIPK------EDIQKVFDRFFR--------VDKARSR--------ETGGTGLGSIAKQIIDAHEGDIQLESEEGKWTKVTVNL............................................ 448
63 -9.150IDP04692 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5105 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  61.....................................................................................................................................................................................................INFFLIFFIPLSIIFFFFLTKPYLKYFSEISNGIHHL-ANGNFTNRVQVSSNDEFGDIAREINVASEKLKEAVERGDFA------------------------ESSKDQLVVNLAHDLRTPLTSVLGYLDLILKDENLTKEQIKHFSTIAYTKSQRLESLIDELFEITRMYGMLQLNKKPI-DISELLIQLDEELYPLLEKHHLEAR---NVDPHLPINGDG------------KLLARVFENL------LTNAVRYGYDGQFVDLNGYIDNEEVVVQVMNYLPYLFDMFYTGDKSRTENTGLGLFIAKNIVEQHNGTISAESNVVRTI...................... 355
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.