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current user: public |
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Query: IDP01905 gene: scsA; suppression of copper sensitivity protein A [Salmonella typhimurium LT2] STM1113 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2], from CSGID |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | MAKQQRMGWWFLCLACVVVMVCTAQRMAGLHALQMQATASAAVVSAPSSTDDGSPVTPCELSAKSLLAAPPVLFEGAILALCLLLSLLAPVRVMRLPFSPPRAISPPTLRVHLRFCVFRE | Last |
1 | -67.600 | IDP01905 gene: scsA; suppression of copper sensitivity protein A [Salmonella typhimurium LT2] STM1113 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] | ali | 100 | 1 | MAKQQRMGWWFLCLACVVVMVCTAQRMAGLHALQMQATASAAVVSAPSSTDDGSPVTPCELSAKSLLAAPPVLFEGAILALCLLLSLLAPVRVMRLPFSPPRAISPPTLRVHLRFCVFRE | 120 |
2 | -12.500 | IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124] | ali follow.. | 4 | 1 | .MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDTKKSDSNNA........................................................ | 63 |
3 | -12.400 | IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames] | ali follow.. | 9 | 1 | MKVYVKIALLCLTFTCIFALACKGTDEKKETNPTSENSKNEQNTSSEGKKEPEVKSNTDSNSKD........................................................ | 65 |
4 | -10.800 | IDP05763 hypothetical protein lmo2331 [Listeria monocytogenes EGD-e] lmo2331 [Listeria monocytogenes EGD-e] | ali follow.. | 7 | 1 | MKKGIALLAGFMLAFSIFLTGCGGTDNTRKENHSDGSAEVKNKKDNNTSDEYVEDGLLLKVGEWT....................................................... | 65 |
5 | -10.500 | IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames] | ali follow.. | 12 | 1 | MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKNP.............................................................. | 58 |
6 | -10.400 | IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames] | ali follow.. | 7 | 1 | MLKK--GILVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENKENKESKKKITAA.............................................................. | 57 |
7 | -9.820 | IDP06159 hypothetical protein jhp0866 [Helicobacter pylori J99] NP_223584 [Helicobacter pylori J99] | ali follow.. | 12 | 1 | MNKKHRLAFLGLIVGVLFFFSCQHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTS-ELQKLGFYNVFTQAEFPLDKAKNVIYV.................................. | 94 |
8 | -9.610 | IDP05121 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_0915 [Bacillus anthracis str. Ames] | ali follow.. | 6 | 1 | MLKK--TTCILGGALVFNLSGCGNTSDKTSSESKETNSKQEEKNVQTTDEAKTKENTKQKNTEQ........................................................ | 63 |
9 | -9.430 | IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames] | ali follow.. | 11 | 1 | M--KAWKSIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPETKEYGGRELKKVGQKVKETGWGTFKLEQIHS................................................. | 69 |
10 | -9.170 | IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] | ali follow.. | 9 | 2 | ...KKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQSDTSTKVDN............................................. | 73 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |