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Query: IDP01940 gene: trg; methyl-accepting chemotaxis protein III [Salmonella typhimurium LT2] STM1626 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGNTFSMQASHKLGFLHHIRLVPLFSSILGGILLLFALSAGLAGYFLLQADRDQRDVTDEIQVRMGLSNSANHLRTARINMIHAGAASRIAEMDEMKANIAAAETRIKQSQDGFNAYMSRAVKTPADDALDNELNARYTAYINGLQPMLKFAKNGMFEAIINHENEQAKQLDAAYNHVLLKAIELRTERARLLSEQAYQRTRLGMMFMIGAFTLALVLTLMTFMVLRRTVIQPLQQSASRIERIAAGDLTMADEPTGRSEIGRLSHHLQQMQHALQQTVGAVRQGAEEIYRGTSEITAGNTDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGKASRGGQMVSGVVQTMGNISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIGASVSLIEQGSEEVIAAGSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRVTQQNASLVEEASAAARSLEEQAARLTQAVDAFRLHDTGATMRSSFLLast
1 -120.000IDP01940 gene: trg; methyl-accepting chemotaxis protein III [Salmonella typhimurium LT2] STM1626 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali  100  1MGNTFSMQASHKLGFLHHIRLVPLFSSILGGILLLFALSAGLAGYFLLQADRDQRDVTDEIQVRMGLSNSANHLRTARINMIHAGAASRIAEMDEMKANIAAAETRIKQSQDGFNAYMSRAVKTPADDALDNELNARYTAYINGLQPMLKFAKNGMFEAIINHENEQAKQLDAAYNHVLLKAIELRTERARLLSEQAYQRTRLGMMFMIGAFTLALVLTLMTFMVLRRTVIQPLQQSASRIERIAAGDLTMADEPTGRSEIGRLSHHLQQMQHALQQTVGAVRQGAEEIYRGTSEITAGNTDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGKASRGGQMVSGVVQTMGNISTSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIGASVSLIEQGSEEVIAAGSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRVTQQNASLVEEASAAARSLEEQAARLTQAVDAFRLHDTGATMRSSFL 541
2 -113.000IDP02460 gene: cheD; methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1675 [Yersinia pestis CO92]  ali follow..  43  1..............MFKRMKVVTSLLLVLVLFGALQLVSGGLFFKSLQNDQENFNVLQVIRQQQSVLNESWVYLLQTRNTLNRAGVINHTGSGPTVKDLISSAKGTLSVAEDRFKRYEKIPQNSSQDPEGAKKLKQSYEEYFSALTELINLMETNK---INEFFNHPTTSFQNEFEQNYNNYLTQNDGLYDSAVEDSNQSFSFAMGVVITVLVVVLVMMLLVWLGMQQILIHPLNHLIAHIKHIANGDLTQNIEVHGRNEVGTLAASLKHMQSELVTIVGEVRVGADAIYSGASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAENARQASQLALSASETAQKGGKVVADVVQTMHEIAGSSQKIADITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDSVNRVDLGSVLVESAGETMGDIVNAVTRVTDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLEEQASMLTQAMSVFVLSVDNSNSTSDV. 528
3 -112.000IDP01089 gene: tsr; methyl-accepting chemotaxis protein I STM4533 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  43  1..............MLKRIKIVTSLLLVLALFGLLQLTSGGLFFNSLKNDKENFTVLQTIRQQQSALNATWVELLQTRNTLNRAGIQSNIGSGATVAELMQGATNTLKLTEKNWEQYEALPRDPRQSEAAFLEIKRTYDIYHGALAELIQLLGAGKINEF---FDQPTQSYQDAFEKQYMAYMQQNDRLYDIAVEDNNSSYNQAMWVLVSVLIAVLVVIIAVWFGIKLSLIAPMNRLIESIRHIASGDLVKRIDVEGSNEMGQLAENLRHMQSELMRTVGDVRNGANAIYSGASEIAMGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVDNVVQTMRDIASSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRIHQQQQRAREVA. 528
4 -111.000IDP02090 gene: tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor [Salmonella typhimurium LT2] STM3577 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  44  1...............MKNIKVITGVIATLGIFSALLLVTGILFYSAVSSDRLNFQNASALSYQQQELGGSFQTLIETRVTINRVAIRMDPASLDAMNTLLTNAGASLNEAEKHFNNYVNSEAIAGKDPALDAQAEASFKQMYDVLQQSIHYLKADNYAAYGN---LDAQKAQDDMEQVYDQWLSQNAQLIKLASDQNQSSFTQMQWTLGIILLIVLIVLAFIWLGLQRVLLRPLQRIMAHIQTIADGDLTHEIEAEGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFRIQKQPRREASPT. 527
5 -110.000IDP01047 putative methyl-accepting chemotaxis protein STM3152 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  40  1............MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMD----VKIGGGTPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFGASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEALGRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMNGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVTQQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTA. 524
6 -109.000IDP02076 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM3216 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  32  3...............LHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRANTGMQNIITNDYPTTVKANLLID--NFNDFIIAQQLMLLDEEGRWSQSSQKELDEISQRITALLDEL-SSNRHDAASQKIITEIREARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYKDKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLALISIAAGCVMGWYIVRSITRPLDEAVRFAEAIADGDLTRHITTDYKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTSEATKLSAGAASVVKNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRQLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA.... 521
7 -94.400IDP01957 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM1657 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  34  2.............................................................................................................................................................................LRNISVRTCIILFMVCAFLLVDTLQIAFLHDLPILITCNIIYLISALLLWWYMTCYLVVPINTVKKSIEEVAAGNLSIHISEFGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASIDEMAASTKNNADNTRMASIQADCATQCARKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVAGEVRNLAHRSAEAAKSIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQPGYSEHALS. 368
8 -93.700IDP02252 gene: tsr2; putative methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1229 [Yersinia pestis CO92]  ali follow..  43  259..................................................................................................................................................................................................SQATAGIHSLLTTSLVTLVIIIFISAGVIALITQRALTPLTHIQQAMDAISSGDLTQRLPIEGRDEVAQIARSFNQFADKLSLVMAQIRGTSESVRVAANEIAAGNQDLSGRTESAAASLQQTSAALEQISATVAQSASAARQANNAVFSASEDASRGGDVITKVITTMESIEKASGKIGDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRILAQRSAQAAKEIKALIESTVSSVASGSSQVRQASNAMTDIVSSVSDVTTIMSEITNAADEQMRGIHEINSAVAQLDTMVQQNAALVQESTAASAALQAQAADLTDTVNQFKI............ 595
9 -56.000IDP01485 hemolysin secretion protein HylB VCA0220 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  21  2..............IINKFSLKWMLAIAVAIPAIALLFVAFTSLNTMSVMQAQSNSLYANTAAPMRAMAEATSRIPRMRVGIDMMLLQETALKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKEQARKLQARFEQMVREELEPMLQAFANNDMTTAQNIYRDKYAPTYGEMRKQANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL............ 548
10 -54.300IDP04179 methyl-accepting chemotaxis protein [Vibrio cholerae O1 biovar eltor str. N16961] VCA0068 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  23  2............RQLLSGLSIKLQVVVPVFFTLLLLIIGITFSTSSLKTAFHQVTVSTEQLITDKDNLTTLID----NTYAMRISAIYSLFRPAEVTALPNVLKEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNQEKDERFTAQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIESSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV............ 547
11 -53.700IDP91343 methyl-accepting chemotaxis protein [Vibrio vulnificus CMCP6] VV2_0072 [Vibrio vulnificus CMCP6]  ali follow..  27  187.................................................................................................................................................................................................................................ISYSSTRRLESLSAEARKVFDNPLMELVYNKKVDDISEIKLALKMRQSELNAVVGRIQDSNQQLIDSARNSSSNSDKASHNLKGQTHETEQVAAAITEMHSTANEIAQNAQSASDATDQAHSAASEGMITVQDTVKAIKQLAQHGKTIGDVLIIIQGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAQRSHESTEEIQKVIGEGTHLAEQCVSSADSSGQKLQILLDQVTDISDRNNQIATAVEEMARVTEDMSSSVQSISDACSATNVLSSDTCHQCNALVKSLDSQGKLVSQFR............. 517
12 -50.800IDP95280 methyl-accepting chemotaxis protein [Acinetobacter baumannii ATCC 17978] YP_001085820 [Acinetobacter baumannii ATCC 17978]  ali follow..  28  293.................................................................................................................................................................................................................................EYDRNQNAILRLLDEIADLADGDLRSYATV-SEDFTGAIADSINFAIDQLRDLVSRIHETSQEVARYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQIASNGAQVVNRSIEGMDTIGESSQEIGNIVSLINDIADQTNILALNAAIQASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVEQTTTEVVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQTTTATFDTARSVSELANMAESLRESVTDFKLPD.......... 625
13 -39.600IDP95064 methyl-accepting chemotaxis protein, partial [Campylobacter jejuni] AGM39603 [Campylobacter jejuni]  ali follow..  19  2................................................................................................................................................................................................................................................................GSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQAALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHIANSINASLRNITESVDEITNVINLIKDVSDQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATTEVEMNIEQVEKISIDSNAHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQLADHTSC................................ 282
14 -34.700IDP01046 putative methyl-accepting chemotaxis protein STM3138 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  16  1......................................................................................................................................................................................................................................................................................MFKKVLGLRHWNNNVVKIPPPAAESGANASDVVVDTPEPYETIDIIRNAIIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEINTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISKEVKNLSEDVKHSSKSVSTLTDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNIVKVDHVIWKMEVYKLLLNKDIN........................................ 263
15 -27.700IDP91610 gene: ECs4554; EspB protein [Escherichia coli O157:H7 str. Sakai] BAB37977 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  31......................................................................................................................................................................................................................................................LSIDSSLLTDGKVDICKLMLEIQKLLGKMVTLLQDYQQKQLAQSYQIQQAVFESQNKAIEEKKAAAGILGSFAAMNNAAKGAGEIAEKASSASSKAAGAASEVANKASAMQKAMATTTKAASRASGVADDVAKASDFAEDLADAAEKTSRINKLLNSVDKLTNTTAFAVTSLAEGTKTLPTTISESVKSTHEVNEQRAKSLENFQGNLELYKQDVRRTQDDITTRLRDITSAVRDLLEVQNRMGQSGRLA............................................. 311
16 -21.800IDP92066 gene: GAPDH2; apicoplast glyceraldehyde-3-phosphate dehydrogenase 2 [Toxoplasma gondii] ABO93620 [Toxoplasma gondii]  ali follow..  10  1............MSLYPRSSVRLRLPLSHCLFLALFLFLSFDNFLPTSRSLNSFS-----------------------------AAALRLDGRDGPRPQTPETFSSSAFAEPSPESTPGACPLSSNDGELSLQQAEALLREEQTLATEYAQRAAGDVQQFTAAAQEAAARGDMSAAKELAAAAAASAAEAEDLAAYAQAVGETDPAVLRER------------AKEEAERFEQEERRQRGGDAASSGTCSESSDAAFAPEFSDLRDLFFGACDAT---------VSPDDLPSVPEALEKLAGLESDVQARGDQLDEKEKVVAEYLVAAQEAAVRHEEASRAFEDAKR--NKKENLAAAAEKAALEAAAEYADLTTAAQLVTEEAEQESAKA------LADAVAAGDLRFAINQKIVNEAGPEARGKVPRALLAPKHVRISDPAAGRVLKIFFHNNFAPFEDLPCAALHADAHLCRQHPRCVVQVEQSGDEVLQRCLLDEAYLALLTKTPDFCAAAPAEAETGLGNSAAQATGTPVSPFA.. 480
17 -12.500IDP04691 sensory box histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5067 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  296.................................................................................................................................................................................................LQPVDEAVQMVQDYYIYIIAFVVVLIFLASFYYSKQIAKPLLKINDTTKKIAHLDFTEQIPITSKDEIGDLSKNINTLSNKLNSHIGQLEQDIEKE----RKLEKTRKEFISGVSHE---LKTPLSIMKSCISILKDGVAEHKKEYYFQAMERE-VDKMDTLILDMLE-LAKFESGTYKMKYIDTVMEAICEHLSVEIEKKELRVHKHIGP----FEVVANQGRIEQ--------IVNFITNAIRYTPNKEDIIENKGTHIEE--EQLDKIWDRFYRVDAARQRSQGGTG-LGLAISKNILELHDAEYGAENTEDGVLYLPKKA........................ 617
18 -12.200IDP04182 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VCA0238 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  1............MRLIERTMFRYRLAFVLALLLTLILAQVGVAYWSNQVANQHLLRGQISSQILQGFMQLSTEKQQLKVWLAEYL-LIKDGSTLKRDMRFSKIEALLHKLNLLTEQAQQHSLTVQDFSEINQQIKTNFASLKKALRSWEIAKITDDDERWLLLSQSFDRVDDTDLRQLLTQAISLQQQRTSRYEEAALDALSNVRSVITSLAVFGMVSGALLGVWLLRTLSKPLAELVKSTTALEQGRLDHRISISGPDELKTLARHFNYMAQSLEQAQQKERMSRQLI---EREVADRTQELAQALQT----LEKAKHQQKEFFANVSHELRSP--ATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIELLMLIRHDERLFHPAAVVRQASLLTHAQQVELCYTDCDKLLM--------IRILVDNALRYDPTQQPILVDQGIGIAE--ADLSVIFERYFRAENGKRYRPDGLG-IGLTLAQ--SIVKQLDGEIRIESVLEQG............................. 530
19 -12.200IDP04672 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1482 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  8  270...............................................................................................................................................................................................ASLQPVNEAMLVLKDYYVYALIIVFLVIILLSFYYSKIIVKPLIKINRVTKKMANFDFSEKLPVTADDEIGGLSGSINTLSVNLKDRIDRLNVANTKLQQDIERERQ-----KTRKEFISGVSHELKTPLSVIRSFAEGIKDGVKDTTYYTDVILEETENMNRLIVEMLE-LAKLESGTYKLDSIGELIQQVYTKLLFSMEEKHLQVNIDVNSS---IFVKANRSRIEQ--------VVNLLSNAIRYTPEGEKIIENTGNPIPE--ESLEKIWDRFYRLDASRSRHTGGTG-LGLSIVK--NILDLHHAEYGVYNTTNSV............................. 590
20 -11.700IDP04543 sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar El Tor str. N16961] VC2453 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  185......................................................................................................................................................................................................................GILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAM---------------------AVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARLANMSHELRTPLNGVIG-MLKTLQTIEKSANNLLTIINILDFSKLEAGKLALEVNLQATSAHEKGLEITLIDPKIRGVVGDPLRIQQVLTNLVGNSIKFTERG------------NIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLQAFSQADASISRRYGGTGLGLV--TQKLVSHMG................ 495
21 -11.700IDP04664 sensor histidine kinase/response regulator [Bacillus anthracis str. `Ames Ancestor`] GBAA0996 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  1............MKSKAKFSIRYKIMAGYLVIILFLLISFIMLNNQISNLQKSRNFIIDHDFKVLNLTNQVEKDLLTIENKAKGFITSNNAN------YLQSLNSAERDYEKHYHDLFSLLEDNPSQQEKLKEINGNITNWMNKEIHPLIANHNSNKIQEID------TTEIQSLQSQLTDFRSTEEQLTKKRAAQLDTKNNKLELWLYSLLFLLSCISIIVSLYISNSITKTIKNVIQAIKSISSKEITERIHVNTHDEIKDLAHTTNHLLDEISK-----REWLQTEIAELILMYQGVSSIEMLGNKILSGIIQKTQTSCGAFYVREEYEETASFADQGFDIGKQSIKMGEGFIGQSALILRDIPEEFRYVTTGLLLVIPVLFEDEVIALEEKASELLRSSKYKSLANMSHELRTLATVIHSSGKDLLTLINDDLSKVEAGKLDVIFEATNISDMAASMHQNVEDSDTIPDLFYTDAKRIEQISNAF----KFTEKGSVSLHFDSIETSNLSHDMQSISKDWITISVKDTG........ 667
22 -11.600IDP04484 gene: barA; two-component regulatory protein [Yersinia pestis CO92] YPO3381 [Yersinia pestis CO92]  ali follow..  13  186......................................................................................................................................................................................................................CMCVAILFAYRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGHMLGELDILKNGINSMAMSLAAYHEEMQQNIDDLRETLEQMEIQNVELGLAKKRAQEASRIKSEFLANMSHELRTPLNGVIGFTRQTLKT--------SLTPTQTDYLQTIQRSANNLLCIINVLDFSKLEADKLILEIILLAHTAHEKGLELTLINNDVDQVLGDAMRLQQIVTNLLGNAIKFTEEG------------NIDILVVVKAIASQQVTLMVEIHDTGIGISESQQAQLQAFRQADASTSRRHGGTGLGLV--TERLVKEMG................ 496
23 -11.600IDP04331 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2181 [Clostridium perfringens ATCC 13124]  ali follow..  9  164...............................................................................................................................................................................................TSFQAIEEASALIKDFYKYIILIVIVIGLILSYVFSNLISKPLVKLNKSAKKMSAMDFSEKCDIEREDEIGNLAKTLNFLSKNLSNALDDLKIKNKKLEEDIEKERELEKLRKDFIAGASHELKTPIGIISGYAEGIKDGIVDHKDQGVYLDIIIDEAEKMNKLVMDMLE-LSKLEAGKIDLHSLTELTEEVLVKNSVDINKNNLTVVKNYSPTEDLYVQGDDFK--------IEQVLTNFVTNAIKYSEPNNQIIENTGAHIPD--SDINKIWTQFYRGDTSRNRGSRS--------------TGLGLSIVKNLLQAHESEFGVMNTENGVKFYFTLKKSKEIDEVEEI 507
24 -11.200IDP04438 gene: cpxA; two component sensor kinase [Yersinia pestis CO92] YPO0073 [Yersinia pestis CO92]  ali follow..  13  171......................................................................................................................................................................................................................TMLISAPLLLWLAWSLAKPARKLKNAADDVARGNLKQHPELSGPQEFLATGASFNQMISSLDRMVVAQQR----ISDISHELRTLATALMRRRHGEGKELERIEMEAQRLDSMIND----------------------------VLSRSQHKNELHREPIKADELWSDVLENAQFEAEQMGKTLVVTAPPGP--WPLFCNPAALDS--------LENIVRNALRYSHHHIAVVDDDGPGVSP--EDREQIFRPFYRTDEARDRASGGTG-LGLAIVE--TAVSQHRGWVKAEDSPLGGLR........................... 446
25 -11.200IDP04495 sensory box sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC0622 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  392..................................................................................................................................................................................................KEAFARVRQLEKLFVFAMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDAMINTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTS---HELRTPL--HG--------IGIAEALISGANGPISAAHKYQLDIIISSGQRLATLVDLLDYHKMRYGALDIRLVLELSHHLLGKKTLRIVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGK-QVVDTGQGIPA--EQLEHIFEPLIQAGHDASRYRQGAG-LGLSISR---------QLIE-----HGTLYVSSQPMVGTTFSFTLP........... 729
26 -11.000IDP04694 gene: yycG; sensory box histidine kinase YycG [Bacillus anthracis str. `Ames Ancestor`] GBAA5714 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  171............................................................................................................................................................................................YVVASMEDVYKQMKDINQIFATGTVIALLVTAVLGILLAQTITRPISDMRRQAIEMAKGNYSRKVKVHSHDEIGQLALSFNNLSKKLQQARSSTESERRKLSSVLSHMTDG---IATDRKGDIILLNDPAEKMLNVSTALDQSVLEVLGIQEEFTLDHLYEEPDSVLLDFSTRSFSVIQKETGKANGLIAVLYDVT------------EQERIERERREFANVSHELRTPLTTMRSYLEALTDGAWQDPNIAPQFLTVIQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFEMSKEQNVSFKRSFSKKSRFIDMDTDKITQVL................. 503
27 -10.800IDP04165 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1521 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  341..................................................................................................................................................................................................................................SRDLFRPIERIHRVVKMVQLGKNQGQIGLDDKHELAQLAKQFDNMLDQLQQRNEEIVQAAHELEAKVQSRTASLQEKTAQLEHHIALLNQTRNKLEKLAALGELTAGIAHEINNILGNTELIRFELGADASRVEEEIDAILLQIERIRNITRSLLQYS-EITWQHVNPIIDESKTGSKKRDIEFVLKAHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRIIEDQGCGIKP--ENLKRIFD-------TTKREGTGL---GLSVSQ--SLLSQSGGEIKVQSELGVG------------STFSI............ 660
28 -10.800IDP04132 putative two-component system sensor kinase [Yersinia pestis CO92] YPO2997 [Yersinia pestis CO92]  ali follow..  13  160.......................................................................................................................................................................................................................VLGGLFFSTLLAWNLTRPMRQLRVGFERVAQGDLSVRLLRRRHDELTEVARDFDSMAERLQALVSAREQ----LHDVSHELRSPLARLQLAIGLAHQNPDNVDNALQRI-------EHESERLDKMIGELLALS--------RAENHSLADDDEYFDLQELVVVVNDARYEAQLPGVEIQLEVAAQSE-----YTVKGNAELMRR--------IENIVRNALRFSASGQQVKVTLSALDKRYQIQVNKLSSIFDPFVRVKSAMSGKGYGLGLAITH--KVILAHGGQVEARNGEQGGLV........................... 439
29 -10.600IDP04012 gene: virJ; sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2355 [Clostridium perfringens ATCC 13124]  ali follow..  11  163..................................................................................................................................................................................................SKEYLELRDLMSNIKFIVSITFLLILIFTYFLFERIINPLNYIKNSFKRIGDGDFKINLKVNSKDEIGDLACGVNKMANKIEEQIEKINEEKEKVLTLE----------KTRTEFFNNITHELKTPLTNISGYAQIMSEEDFHDNDFRKFALERINKESKRMHELIVSLIEISKNKSENVNLKTLIEDLCEDFKVKGDKQGICISNNLED----IEFMCREDEIRR--------IINLLDNAIKYSIKGSEIIENLSDEISS--EGVEKIFEPFYRENTKKSRELGGNG-LGLYICS--ELVKKYGGDISFNYSNGKV............................. 475
30 -10.600IDP04673 gene: resE; sensor histidine kinase ResE [Bacillus anthracis str. `Ames Ancestor`] GBAA1498 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  157............................................................................................................................................................................................FVYESLQVPIQGMERTTDFIFLSAGIAIILTTFFAFFLSTRITAPLRKMREVAFEVSRGKFDAKAPMVSQDEIGELATALNQMGKQLKFNMNALQQEKEQLASILSSMADG---ITLNQEGEVVVINPPAEHFLQVWQEEKEIELSKKLPSELVELFHLVVESEQQQVVGINLQKGNYVVLMTPLYN--TKIRGA-----VAVLRDMTEERRLEKMRQDFANVSHELRTPMVMLQGYSEAILDDIVQTKEEINEFVQIIYDESVRLGKLVNELLDLARMESGNVELHIGEVDIHPFVEKIGRKFQIAKDKEVALTVDFKDSIEQYPFDADRMEQVL................. 486
31 -10.300IDP95472 sensor histidine kinase [Listeria monocytogenes 10403S] YP_005962624 [Listeria monocytogenes 10403S]  ali follow..  11  156..................................................................................................................................................................................................SGTEQVIGTINRYMFYTILLSITVALILSAILSKLQVNRINKLRAATKDVIQGNYNARLKENNFDEIGALAIDFNKMTQTLETSQEEIERQEKRIADVSHEMRTPLTTISGLTE----GLVNDIIPKSETDRCIALIDTEARRLTKLVNENLDYE----KIRSNKIKLQKTRFNGKEFLELIKEQLDYVASEKGNITVAIDKDMAIYADYDRLTQVFINIVKNSVQFTENGQITLTGTQDYKESVLT-----ITDTGIGMNT--EELEQIWERFYKADMSRTNTAFGESGIGLSIVK--QLIEYHDGSITVTSEPNKG............................. 461
32 -10.200IDP02181 two-component sensor/regulator [Yersinia pestis CO92] YPO0256 [Yersinia pestis CO92]  ali follow..  11  289.....................................................................................................................................................................................................WEALKPALYQLPFALAILLLLTSVLSLLLRYYLAIPLWNFINIIGATGPQAMEPRLPINRIDELGHIARAYNNL---------------------LDTLNEQYDTLEMKVKERTLALAEA-----------KRAAEQANRRKSLTTISHEIRTPLNGALGAV-RLAETAHQCSLSLLAIINLLDFSRIESGQMTLSMLTIHSQALSKSLALSTISANIPLELELDTLRLRQI-NLLGNAVKFTPQGR--VEDTGCGIDV-----QHQQTIFQPFMQTSDH-GTGLGAIADNLAKM-----MGGHLTVFSEPGQGS............................. 606
33 -10.100IDP01908 gene: ssrA; sensor kinase [Salmonella typhimurium LT2] STM1392 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  287.....................................................................................................................................................................................................NRILKIILQQIPFTLTALVLMTSAFCWLLHRSLAKPLWRFVDVINKTATAPLSTRLPAQRLDELDSIAGAFNQLLDTL--------------------------------QVQYDNLENKVAERTQALNEAKKRAERANKRKSLTVISHELRTPMNGVLGAI-GLADTARNCTLSLLAIINLLDFSRIESGHFTLHMQTIQGPAQSKKLSLRTVGQHVPLYFHTDSIRLRQI-NLLGNAVKFTETGG-LVSDSGKGIEI--QQQSQIFTAFYQADTNSQGTGIGLT-IASSLAKM-----MGGNLTLKSVPGVGT............................. 604
34 -10.100IDP04430 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA4921 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  171............................................................................................................................................................................................................PILFVSLLLLAILLIGLLSYLVSRSVIKPIFVLKDATGKIKEGNLDFHIPVTSHDEIGQLNQGFEEMRKKLKESIEMQTQYEENISNISHDLKTPITSIIGYVEGIKDGVANTPEKMDKYLTTIHTKARHMDTLIDELFLFSKLDLNRVPFQFETVELNMFMQELIEEMQMDLS--EGIEVNLQLHASPLYVTA----DCEKINRVISNLIHNSVKYMDKEEKKITVTVSSDNNKVI-----VMDNGSGIES--DTLPYIFERFYRAEQSRNSSTGGSG-LGLAIAK--QIIEEHGGNIWAESELGEGTS........................... 471
35 -9.970IDP04247 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1402 [Clostridium perfringens ATCC 13124]  ali follow..  8  161..................................................................................................................................................................................................NPKIGFKIFVYIMISLYIFIFTMSLILYSKLTSKTFTKPLDKLMNGVRKLSLGDYSTRINIEKNNEFEELGEAFNNMASKIEEEKKLKEKSEKLVRNIAHDLKTPLSSIIGYSNIIKNNPDIEKESLHKYISVIENNGERANE-----------------MIMELFE-FYTLQSSEFILQDLSEFLRNLIYIYLLEEKDFDFDFEISEDD----LYLEFDNKRLER--------IGNLIINSVKYNKKGTKFVSDDGIGLSE--EIKKHIFNPFVREEKSRNSKKGGSG-LGLTISK--EIVEKHGGTIYLSDGPLKGCN........................... 470
36 -9.970IDP04515 putative sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2673 [Clostridium perfringens ATCC 13124]  ali follow..  11  282......................................................................................................................................................................................................................IPIVLVIHFIVKFIRKYDGLDTVIKGIEKVKKGDTDIEIKDNDDRQIRELADDVNDLRLGYKELVEE-KLKTELISNVSHDLKTNYVNILQLNNIKEEERKEYIEILDKKSQTLKKLIDDLFEVSKMSSGKVELFKYNIDIIQLVYQCIAEVEDVYSE--------KEIEFKING-------------------CMVKIDPQRM-------SRVFQNLTTNALKYSLEKTRVYVEIKDLENYVEISFKNISSARGDESRNSTIEGSGLGAIAKTIVEL................................................. 553
37 -9.950IDP06113 histidine kinase sensor protein [Helicobacter pylori J99] NP_222872 [Helicobacter pylori J99]  ali follow..  11  138......................................................................................................................................................................................................................VGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVL----LRSIMHELRTPITKGKILSSKEELSCKRFSSIFDHLNMLI----EQFARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKKSPIHVSSSNYIIEADFELFNMIDNAIKYSDDKQVFLDFIGNNLVVSNKSKPLKEDFEKYLQSSNPSQAHGFGL----GMYI------IKNALEAMGLNLSYHYSNGRICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQL.................. 440
38 -9.940IDP04007 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1319 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  147.......................................................................................................................................................................................................................LGGFALYCMFLIWFLSRRLRELERVTHDFANGNLQARASTKSSKSVGKLNHSFNMMADKISHLILSNKALTNAI---AHDLRT-ESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVN----QWLADFIDEQSHLDADPQLLTRALVIRNAEKYAGDRLLIEASTVDAKL-DNGPG--IEEQHWPHIFDA-----------TDSSRNKAQSGFGL----GLAI------VKQIMARHQGEVTLTKSPLGGA........................................................... 420
39 -9.750IDP04104 gene: rstB; two-component regulatory system, sensor kinase protein [Yersinia pestis CO92] YPO2309 [Yersinia pestis CO92]  ali follow..  12  136......................................................................................................................................................................................................................IGLSLALPVFLWMRPHWKDLLKLENAAQRLGSGHLDERTHFDPTSSLSRLGVAFNQMADNINTLIVSKKLLIDGIATPLVRLRYRLAMSDNLTESEQQALHHDIGQLEALIDELLTYARLDRPQVSLNLEPIDLP----AWLTTKIMDIRSIHQERE------------------IELDIPHRGDFGAVDLRLMERVLDNLVNNALRYSHQRLRIGLWFDGDNACLQ-----VEDDGPGIPP--EERTRIFEPFVRLDPSRDRATGGCG-LGLAIVHSIALAYQGSISVNTSPLGGASFR........................... 409
40 -9.720IDP04352 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0584 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  179..................................................................................................................................................................................................SFLENMLLKLMKQFLIISVLTIILTTISVFIFSRVITEPLIKMKRATEKMSKLNKPIQLGIKRNDELGSLAKTIEDLSSELTY-MKKERG--EFLASVAHELLTPLTYMKGYAK----VAKRDSLTKEEREEYLQIIEDETDSVTDLVQDLFMLVQLEQHQFVIKKQKVL-----RPFLERMVEKTKTTLTNKQMLHVYCKDDLEVCIDERRMEQVMLNLLHN-AYQHSLENTTITIRVLAETNSFT----SVQDEGEGIPE--GDIPHIFDRFYRVDKSRTRATGGKG-IGLAVAK--EIVELHNGSILVTSKLDVG............................. 477
41 -9.620IDP04347 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2345 [Clostridium perfringens ATCC 13124]  ali follow..  14  276..................................................................................................................................................................................................SNATKVPLLFKVSAFLVSLFLFIIAECVLYIKFKNLSSRMDSLVLAMEKVEKGDIDVHIPLKDRDEITFIADNFNKMCEKLNDHIRKS---------------------------YLAELRQREAEIVALQNQINPH-------NTLESIRMKAICNGDKEVGKMLYSLAFLFRSQVKGNLIVSIDQEIKYCNKYL----ELFKFRYDEKFKFKIECEEDLYDKGIVKFTLQPLIENYFVHGIRLERDDNELKIYIYKHLEDIVVEVEKLDDINRRIRECDHSGKSGMLNVHERI.................................................... 546
42 -9.620IDP04428 gene: phoR; sensory box histidine kinase PhoR [Bacillus anthracis str. `Ames Ancestor`] GBAA4832 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  146............................................................................................................................................................................................LVKSTIEPLKDVHQKTWGLLIIGFVIACLVVVFLGMKITGQYIRPIESVTKVAIELAKGNYKARAYESHSDETGMLSKAINILARNLQEMTLEQEMQQDRLHTLIENMGSG---ILIDSRGYINLVNRSYKETFHVTEYLDRLYYESFHHTEIIELVEEIFMTEVKVRKQMLLPLGIFEVYGAPIIGTNHEWKGI-----VLVFHDITELKKLEQMRKDFANVSHELKTPITSIKGFSETLLDGAMDNKKFCEHFLHIILKESERMQGLIEDLLDLSKIEQQGFKLSMGTVDMKGLLEDIHMVLDNKAGEKEISLQVNTLKRVSVIGDPSRLQQIF................. 481
43 -9.530IDP01736 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5503 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  151...............................................................................................................................................................................................NELTGEKEVLTNVGWTFLMTSLCLVAAGIFFAIRLAKSLHKPIDQLRQMAHRLANGDYKSKIELNEYVEIAQLSASFNAMADGIELHIKQLKEEKEKLDRITHELKTGYVDLLKAKEDVKESLRYVAVESERLLSLVEELLKSSKGTSTFEISPTVVNIK--ELAEEAVSIVKPVVADFDKTKQIF---------LNVL--DNAIKYSDATQHDDGIGIDEGVLAEWNES-----------PEGKILPSSYGHGY----GLYI------CQEIMDK-GSMRIESSEEIGTTIFITFLLPRRMEDIKNLKAV....................................... 475
44 -9.390IDP04158 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1088 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  139................................................................................................................................................................................................DLSYLEQQLAHARKWTLLIVLGEMGLVALFSYLLGNALTRRLTELKTATDQITFGNREVLLEIQGHDEISRVAHSFQQMVQSL-------RHSEATMRDYQHQLEQWNLELEDKVNQRTETLLAKNQQLEEMNTKLTLMKDKLVETEKMIS-AAGFAHEINNPNGALKSHLQLLQQDFNQLKVGFEQID------ILLSGSDFHGKFTQTKNALYLEESFSGIEESLRDALHCVDRIKTIV-DKVQRCQAEPALHDSSWVSPLSLVEQAIQICGLREWVVWK--EQTLYPPLIYCYSNDFVTALSANAAYASDDPMIRIELSLRHDHQQLEIEV............... 464
45 -9.340IDP04189 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0225 [Clostridium perfringens ATCC 13124]  ali follow..  12  163...............................................................................................................................................................................................LINTEAYEILRNTLTIFIISGLIAIVIAIFLINTFAKELVSPLMILKQKSKNISEGKFKEELHITSGDEVEDLANTFNIMSENLDKYINEIKSAKLHFDNVSHEFKTGFSEILNDKEKIVQSSALIEKEGKRLLNLVEEILLLAKNKNTFEIEYTYIDVK--SLIEDCLKILK-IYGDHDKTKQVF---------INII--DNAIKYSGCE--------------TLSISTKRSPNKMEVIIEDDGTGFIIKDEYVNPKGNGLG--IKICKDIMQS-YGFNIESELDVGTKVTLSFSIGKNNEIKEEDF......................................... 474
46 -9.250IDP04667 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1313 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  152..................................................................................................................................................................................................KSIKDLIYDMGLILAPLALAITLLTIWIGRKIIIAITRPLSQMERVANHLATGDFSERITISSEDEIGRLGKAFNKMANSLETE----VKRKEFLANVSHELRTPLSYIKGYSE----AILDGVAKGPQQEKVTQLIHKEADRMQRLVHDLLDLAQLEGEHFPLQKQPIV-----SQLIEDVLDTYEIKFIEKKIISTNLNPEIIVMIDEDRMQQVLHNVLDN-AIRYTNQNGDIMITLRQIDDYCE-----IKDTGIGIDT--EHLENLGERFYRVDKARSRQHGGTG-LGLAIVR--QIVHIHDGQWQIESEKGNG............................. 450
47 -9.050IDP04550 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0460 [Clostridium perfringens ATCC 13124]  ali follow..  11  449...................................................................................................................................................................................................................VVIYSGILFYFGRKYIDKWKKDYNKILEKTKEISNGNLDSKDDE-DCGFFNPMRDELNNIQKGFKAAVDE-RMKTELISNVSHDLKTAYVDL--KGEEDEEKRKAYLETLERKSQRLKHLIEDLFEVSKATTGNINLNIMDVDISYLMKQVVLELDDKINE--------AGLDMRLSLPEEKVILPL---GQR--------------------TYRVFENLIINVVKYALPNSRVYIDIKEGRENVDVIIKNISEISDRFVRGDKSRNTEGSGLGLAIVK---------SFVE-LQGGKFHIEVDGDLFKAIISF............... 740
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.