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Query: IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQAVQELLERSPKAELast
1 -110.000IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali  100  1MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQAVQELLERSPKAE 332
2 -104.000IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  43  1...MQKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNHKYLPSIKFPSRLKAIQDWQANIIEFDSILVATPSSGFKNTILELKECILPQQNIISATKGFCHDSALLSEIAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINYARYVQELFSNENFRCYTTTDIIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLSCLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNLAKKHNVEMPLVFATYRILYEAADPRDIVKELMTRQLKNE 331
3 -102.000IDP02668 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1526 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  41  2.....TKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKHENSRYLPGITLPSTIVAYSSLEEALVDVNVVLIVVPTKAYREVLQDMKKYVAGPTTWIHASKGIEPGTKRISEVIEEEIPEKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGNNVKDAVGSLMGRVRKHE 332
4 -89.500IDP92082 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_107570 [Toxoplasma gondii ME49]  ali follow..  24  18LQKGPLRVAVIGSGNWGSVIGKICAQNAEQVRMWVFEEKLTDIINQKHENVKYLPGHKLPDNLVAVPDVVEACRGADLLVFVMPHQFVAKVCDQLAKAVPSHARAISLLKGLYVEGQLFSDTIRSKLNIVECAALSGANVANDVAREEFAEATIGHSPDETALIWQQLFDKPYFKVNTLPDVAGVQLCGAVKNVVALAAGFCDGLGLGTNTKSAIIRLGVEEMKQFGMIFFDNAETFFDSAGYADVITTVFGGRNARCAAEFVRQKGSKTWDQIEAEGQKLQGTLTAREVFEVISSHEVDFPLFTVTYDIAFKGRDPADLVRVFETREVRPH 375
5 -87.500IDP90690 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1196c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  35  2.....MRIAVIGAGKWGSALHLALKE-NHNCFISSLH----------------------QRDLEDFVSIKEAL-ECEYLVFALSSQGMRAWLKEN--FINKGQKILIASKGIEDQSQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFF-PDFIKTYIDNDVRGAEICGAYKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLDSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIF-KGKSVQEATQNLLKQN.... 297
6 -80.500IDP92023 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_010260 [Toxoplasma gondii ME49]  ali follow..  25  12LQSGPLKVSVVGSGNWGSVIAKIVALNAQEVRMWVYEEMVTDIINKTHENRKYLPGHKLPENLVALPDVVEACRDSDLLIFIMPHQFATKVCEQLAEAVPGHARAITLLKGLHVENTLFSDIFKTKLDIVDCCVLSGANVANDVAREEFAEATIGYSPEETALIWQQLFDTPYFKVNALPDVAGVQVCGAVKNVIAIAAGFCDGLGLGTNAKTAIIRLGVEEMKQFAMIFFDMAETFFDSAGYADVITTVFGGRNARCAAEFRRGGKATWDQIEADLGQKLQGTLTTKEVYEVIAAYEVEFPLFSVTYEIAFNGRDPNDLIRVFKTSEVRQH 369
7 -19.700IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  16  2......NIVVLGPGAVGSLWALHLHSAGHQVALWSRQAQPTITLQLDEEAP-----------ISFRNQNLDTLIHADLLLITVKAWQVEAALQPLLPHLNRETILLFMHNGMGA-----VEAISESLTHFPVALKATLNQVSHTGFGQ-TQVGPFNALGARCDFIADVFNHALAPVTWNPEIQQA-AVNCAINPLTAIHQCANG-ALVAPEFTPIITAILDEVTAVMQAEAIS----GEAEALRDGVYQVIQATAANLS--------SMHQDVFHRRPTEIDFIT---YVVRKGEQHGIATPVNSALYQQI..................... 286
8 -15.400IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  15  2......KIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEK--------------GVAVYTSPIDLAAKVDLVFTMLSKAAIDAVLAPKFWEQMSKKIVVNMST-----APLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVL-----------AHLG-------SQTFYLGVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKK-GMWLQDNYPAAFSLKLMAKDIRLAKN-----------EAGEAMKLPFLFQAEELY..................... 260
9 -14.100IDP02492 gene: proC; pyrroline-5-carboxylate reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT1559c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  9  2......KICFIGGGNMAAAMIAGMTSHGYK----------SQDIIVFDRNEHKCLNLIKKYNINTSTSLLNTIKLADVLILAIKPQNMFELIKNIRDTVTSTQVIVTVAAGIQTSA------YEELFNKEISFARTIPNTPSSLGYGATGIFFNKVIAADKKDLVIDIMQT-----------MGVVTVVEDEKEIDIVAAIA-------SSGPAYYFQFMEHMVEAAIKQGLDKKQAEKLVGAAQMAL-------------------NTNENMSELRKNVTSKKGITYEALNIFEQFNLGGIVDKAIQANIARAQQLAIEFTKLIDN..... 274
10 -14.000IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  12  19.....KKVAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVKAKNA---------------FEVVSVSEASKIADVIMILAPDEIQADIFNVIKPNLSEGKAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESKNAKNLALSYASATFKAETETDLFGEQLCGGLSALIQAGFETLVEAGYEPEMAYFECLHEMKLIVDLIYQGG---------------IADMRYSISNTAEYGDYITGPKIIEETKKAMKGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLKTGRNLRAMMPWISAKK 333
11 -12.300IDP02179 gene: proC; pyrroline-5-carboxylate reductase [Coxiella burnetii RSA 493] CBU_2090 [Coxiella burnetii RSA 493]  ali follow..  11  3....TSNITFIGGGNMARNIVVGLIANGYD----------PNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETILVISLAVGVTTPL------IEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRA-----------VGLVIWVSSEDQIEKIAALS-------GSGPAYIFLIMEALQEAAEQLGLTKETAELLTGAARMALETEQSVVQLRQ-------------------FVTSPGGTTEQAIKVLESGNLRELFIKALTAAVNRAKELSKTVDQ......... 274
12 -12.100IDP00140 pyrroline-5-carboxylate reductase, putative BA_0197 [Bacillus anthracis str. Ames]  ali follow..  15  4....KHRILFIGAGRMAEAIFSGLLKTSK---------YIEEIIVSNRSNVEKLDQLRARYNVSTTTDWKQHVTSVDTIVLAMPPSAHEELLAELSPLLS-NQLVVTVAAGISPSY------LEERLPGGTPVAWIMPNTAAEIGKSISLYTMGQFVNETHQETLQLLLRGIGTSQLCTEELTAVTGSAPAFLYYFAESLIEATKSYGVDEATAKMISGSASMLEQTQDPANLREQVTTPGG.......................................................................................... 235
13 -11.800IDP04467 putative nucleotide sugar dehydrogenase [Yersinia pestis CO92] YPO2174 [Yersinia pestis CO92]  ali follow..  14  2......KVTVFGIGYVGLVQATVLAEVGHDVLCIDIDANKVADLKKGRI-APLVKENYEAGRLQFSTDAQAGVAHGVIQFIAVGTKYVLDVASTIGTYMDSPKVIIDKSTVPVGTADKVHQVIQAILEQIDFSVVSNPEFLKE----RPERIVIGTDDSGALELISELYE---------------PFNRNHDRMLVMDIRSAELTKYAANGMLATKISFMNEIANIAERLGADIEKVRQGIGSDSRI-------YHFIYSGCGYGGSCFPKDI--------------QALIRTAEDKGYKPQLLQAVEQI...................... 296
14 -11.500IDP90565 ketol-acid reductoisomerase [Vibrio cholerae O1 biovar eltor str. N16961] VC0162 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  36...KGKKVVIVGCGAQGLNQGLNMRDSGLDVSYALRQAAIDEQRQSFK---------NAKNNGFNVGSYEQLIPTADLVINLTPDKQHTSVVNAVMPLMKQGAALG-YSHGFNIVEEGMQ------IRKDITVVMVAPKCPGTEVRGVPTLIAVHPENDPQGEGWEIAKAWAAATGGHRAGCLASSFVAEVKSDLMGEQTILCGMAGSIVCYEKMVADGIDPGYAGKLLQFGWETITEALKFGG--ITHMMDRLSNPAKIKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADWA.................................. 321
15 -11.300IDP01406 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase VC0918 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  1...MFNKVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTINKGEIHDIVVRSAVMTGKLKATLTAEPA----DAFLVAVPTSYIEAAAKTIAPVLAKGNLVVLESTSPVGTTEKLAQWLAEARPAADVKIAYCPERVLPLQELVSNDRVIGGVSKACSEKAVALYKTFVKGECIVTNARTAEMAKLTENSFDVNIAFA-------NELSLVCNKLKINVWELIRLANRHPRVSILNPGPG-FIVNSCPDEAQLIRTAREVNDGKPHWVVDQVKQAADQFKKPIIACLGLAFKADIESPALDITKHLAESK.................. 345
16 -11.300IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  12  18.....KKVAIIGYGSQGHAHAQNLRDNGFDVVVGLRKGKSWDKAKEDGFS---------------VYTVAEAAKQADVVMILLPELQPEVYEEEIAPNLQAGNSLVFAH-NVHFDQVKPPVNVDVFLVAPK----PGHLVRRTFSEGGAVPALFAVYQDATGVATEKALS------------YADGIGATRAGVLETTFKEETETDL-QAVLCGGVTALVKAGFETLVDAGYQPELAYELKLIVDLMYEMRYSVSDTAQWGDFVSGPRVVEDTKKAMGTVLAEIQDGTFARGWIAEHKAGKPNFYATNEKENEHEVVGRKLRGMMP...... 325
17 -10.800IDP01235 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase BA_5512 [Bacillus anthracis str. Ames]  ali follow..  8  2......KICTMGLGYIGLPTSAMFAKYGTEVVGVDIHQKVVDKLNNGEIHGEVVKEVVANGKFRASLTPEEA----DAFIISVPTSYVLTATEKVLPFVKKGNVIIVESTIAPRSMDDYVKPLVEEAGGEDIYLVHCPERVLPLHELVHNNRIVGGVTPACAEAGARVYGVFVEGEIIKTNAKTAEMSKLMENTFDVNIALA-------NELTKVCNSLDINVLDVIEMANKHPRVNLHYPGPG-FIVAKAPELANIIKLSRETNVSMPHYVTEKVKELLAGVENPKVAAFGVTYKGNVESPAMDVIDLIRNEGITVS.............. 341
18 -10.600IDP00702 gene: cap5O; capsular polysaccharide biosynthesis protein Cap5O SACOL0150 [Staphylococcus aureus subsp. aureus COL]  ali follow..  11  2......KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISQEVYEEVLSSGKLKVSTTPDAS----DVFIIAVPTSLVMRALDSILSFLEKGNTIIVESTIAPKTMDDFVKPVIENLGGEDIYLVHCPERVLPLEELVHNNRIIGGVTEACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYDVNIALA-------NELTKICNNLNINVLDVIEMANKHPRVNIHQPGPG-FIIAKDPENAKLIQTGREINNSMPAYVVDTTKQIIKVLSGNKVTVFGLTYKGDVESPAFDIYELLNQE................... 336
19 -10.400IDP00425 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase YPO3863 [Yersinia pestis CO92]  ali follow..  11  2...SFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETINRGAIHDKVVKIAVEGGYLQAVTKPQAA----DAFLIAVPTIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEARPDADINIAYCPERVLPMVELIQNDRVIGGMTPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFDVNIAFA-------NELSLICDEQGINVWELIRLANRHPRVNILQPGPG........................................................................................ 261
20 -10.400IDP02524 gene: ilvC-2; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1852 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  17.....KTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE---------------VMSVSEAVRTAQVVQMLLPDEQQAHVYAEVEENLREGQMLLFSHGFNIHFGQINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAVHQDATGTALHVALAYAETTFQEETETDLFGEQLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELKLIVDLMYEGG---------------LTNMRHSISDTAEFGDYVTGSRIVTDETKKMKRVLTEIQQGEFAKKWILENQAGRPTYNAMKKAEQNHQKVGEELREMMSWIHAPK 330
21 -10.100IDP01494 UDP-glucose 6-dehydrogenase VCA0780 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  2......KIAIAGTGYVGLSNGILLAQ-HNEVVALDIVVSRVEQLND-KISPIADPEIE--LNFRATCDKRDAYQDAQFVVIATPTRTVEAVIDDVLAINPQAIMVIKSTVPVGYTKRIKQRLCC-------NNLIFSPEFLRE----YPSRIIVGEKSERGQAFATLLAQG---------------AKKMDIPILLTHSTEAEAVKLFSNTYLAMRVSFFNELDTYAETHGLDTKQIIEGVGLDPRI..................................................................................... 238
22 -10.000IDP01969 gene: kfiD; putative UDP-glucose 6-dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1441c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  12  2......KIVIVGIGYVGLANAILFSKNNNEVVLLDIDENKIQSINN-HKSPIKDKLIE--SKLHATSNIKEAYFNADFAVIATPTRSIENVLKDIKNINSKINVIIKSTVPIGYTKTIKQKF-------NMSNIVFSPEFLRE----YPSRIIIGDKSVLGKTIGDLFLKN---------------IEKKNVDIFYMDSDEAESVKLFSNTYLAMRVGFFNEVDSYARKHNLNSADIIKGISADDRI-------KYYNNPSFGYG-GYCLPKDTKQL---------------LANFYNIPNSLIKAIVET...................... 281
23 -9.450IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]  ali follow..  12  2...TKANFGVVGMAVMGRNLALNIESRGYTVAIYNRSKEKTEDVIACHPE----------KNFVPSYDVESFVNSIEKPRRIMLMPGTDATIQALLPHLDKGDILIDGGNTFYKDTIRRNEELANSINFIGTGVSGGEKGALE------GPSIMPGGQKEAYELVADVLEEISAKAPEDGKPCVTYIGPD---------GAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSAEDMA............................................................................................. 217
24 -9.390IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  2...ENLQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDETIEENRG----------KNLVGTHIVEEFVNSLESPRKILLMEITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAEEINFIGAGVSGGEEGALK------GPSIMPGGQKDAYEKVKDMLENISAKVNNEPCCSYIGPNGAGHYVKMV-----------HNGIEYGDMQLICEAYFFLKQTLDLTAE................................................................................................ 212
25 -9.170IDP05101 gene: hbd; 3-hydroxybutyryl-CoA dehydrogenase [Clostridium difficile 630] CD1058 [Peptoclostridium difficile 630]  ali follow..  13  1.....MKLAVIGSGTMGSGIVQTFASCGHDVCLKSRTQGAIDKCLATKGKMDEATKAEILSHVSSTTNYED-LKDMDLIIEASVEDM-KDVFKLLDELCKEDTILATNTSSLSITEIASSTKRPDKVIGMHFFNPVPMMKLVEVISGQLTSKVTFDTVFELSKSINK-------VPVDVSESPGFVVNRILIPMI--------------NEAVGIYADGVASKEEIDEAMKLGANHPMGPLALGDLIHPLLAKMVRANQLGRKTKIG................................................................. 275
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.