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Query: IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MENLQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDETIEENRGKNLVGTHIVEEFVNSLESPRKILLMVNAGEITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAEEGINFIGAGVSGGEEGALKGPSIMPGGQKDAYEKVKDMLENISAKVNNEPCCSYIGPNGAGHYVKMVHNGIEYGDMQLICEAYFFLKQTLDLTAEEFHEIFAEWNKGELNSYLIEITADIFKKKDEETGKPLVDVILDTAGQKGTGKWTSQSALDLGISLPIITESVFARCISALKEERVNASKVLSGPKDKTAIGVEKAELIEAVRQALYMSKICSYAQGFTQLKAASEEYNWNLDFGSISMLWRGGCIIRAAFLQNIKEAYETNTDLPNLLLDPYFKEIVESYQGGLRQIISMAVQQGIPIPAFSAAISYYDSYRTAKLPANLLQAQRDYFGAHTYKRVDKEGTFHTKWILast
1 -122.000IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`]  ali  100  1MENLQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDETIEENRGKNLVGTHIVEEFVNSLESPRKILLMVNAGEITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAEEGINFIGAGVSGGEEGALKGPSIMPGGQKDAYEKVKDMLENISAKVNNEPCCSYIGPNGAGHYVKMVHNGIEYGDMQLICEAYFFLKQTLDLTAEEFHEIFAEWNKGELNSYLIEITADIFKKKDEETGKPLVDVILDTAGQKGTGKWTSQSALDLGISLPIITESVFARCISALKEERVNASKVLSGPKDKTAIGVEKAELIEAVRQALYMSKICSYAQGFTQLKAASEEYNWNLDFGSISMLWRGGCIIRAAFLQNIKEAYETNTDLPNLLLDPYFKEIVESYQGGLRQIISMAVQQGIPIPAFSAAISYYDSYRTAKLPANLLQAQRDYFGAHTYKRVDKEGTFHTKWI 469
2 -113.000IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]  ali follow..  64  1MTKANFGVVGMAVMGRNLALNIESRGYTVAIYNRSKEKTEDVIACHPEKNFVPSYDVESFVNSIEKPRRIMLMVQAGPGTDATIQALLPHLDKGDILIDGGNTFYKDTIRRNEELANSGINFIGTGVSGGEKGALEGPSIMPGGQKEAYELVADVLEEISAKAPGKPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSAEDMAEIFTEWNKGELDSYLIEITADILSRKDDEGDGPIVDYILDAAGNKGTGKWTSQSSLDLGVPLSLITESVFARYISTYKEERVHASKVLPK-PAAFNFEGDKAELIEKIRQALYFSKIISYAQGFAQLRVASKENNWNLPFADIASIWRDGCIIRSRFLQKITDAYNRDADLANLLLDEYFLDVTAKYQQAVRDIVALAVQAGVPVPTFSAAITYFDSYRSADLPANLIQAQRDYFGAHTYQRKDKEGTFHYSW. 470
3 -57.300IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  15  1...MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVA----VYTSPIDLAAKVDLVFTMLSDKAAIDAVLAPKFW---EQMSKKIVVNMSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGLLILAAGDEEVISKLKPVLAHLGSQ------TFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGV----DAESFLQIIGQSGMNSPLFQAKKGMWLQDNYPAAFSLKLMAKDIRLAKNEAG-EAMKLPFLFQAEELYSQAEKSGLGGLDMAAVYHYLEKGEH.................................................................................................................................................................... 285
4 -23.400IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  15LKEKKVAIIGYGSQGHAHAQNLRDNGFDVVVGLRKGKSWDKAKEDGFS-----VYTVAEAAKQADVVMILLPDELQPEVY---EEEIAPNLQAGNSLVFAHGFNPVNVDVFLVAPKGPGHLVRRTFSEGG--AVPALFAVYQDATGVATEKALSYADGIGAT------RAGVLETTFKEETETEQAVLCGGVTALVKAGFETLVDAGYQPELAYFECLHELK....................................................................................................................................................................................................................................................... 232
5 -20.900IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  11  16IKSKKVAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVKAKNAGFE----VVSVSEASKIADV---IMILAPDEIQADIFNVEIKPNLSEGKAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTLIAIHQDESKNAKNLALSYASAIGGGRTGIIETTFKAETETDLEQAVLCGGLSALIQAGFETLVEAGYEPEMAYFECLHEMK....................................................................................................................................................................................................................................................... 234
6 -18.700IDP02524 gene: ilvC-2; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1852 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  14LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-----VMSVSEAVRTAQVVQMLLPDEQQAHVY---KAEVEENLREGQMLLFSHGFNPSYVDVAMVAPKSPGHLVRRVFQEGN--GVPALVAVHQDATGTALHVALAYAKGVGCTR------AGVIETTFQEETET-QAVLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELK....................................................................................................................................................................................................................................................... 231
7 -13.600IDP00425 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase YPO3863 [Yersinia pestis CO92]  ali follow..  15  1MSFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETIVEPDLDKVVKIAVEGGYLPQAADAFLIAVPTPPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEARPDLADINIAYCPERVLPGQVVIGGMTPKCSARASALYKIFLEGE------CVVTNSRTAEMCKLTENSFRDVNIAFANELSLICDEQGI----NVWELIRLAN....................................................................................................................................................................................................................................................... 248
8 -13.300IDP01406 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase VC0918 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  16  2..FNKVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTIVMTGKLKATLTAEPADAFLVAVPTPFKGDNHEPDLSYIEAAAKTIAPVLAKGNLVVLESTSPVGTTEKLAQWLAEARPDLTDVKIAYCPERVLPGYVVIGGVSKACSEKAVALYKTFVKG------ECIVTNARTAEMAKLTENSFRDVNIAFANELSLVCNKLKI----NVWELIRLAN....................................................................................................................................................................................................................................................... 248
9 -13.200IDP04467 putative nucleotide sugar dehydrogenase [Yersinia pestis CO92] YPO2174 [Yersinia pestis CO92]  ali follow..  13  1...MKVTVFGIGYVGLVQATVLAEVGHDVLCIDIDANKVADLKENYEAGRLQFSTDAQAGVAHGVIQFIAVGTPADLKYVLDVASTIGTYMDSPKVIIDKSTVPVGTADKVHQVIQAILEQRIDFSVVSNPEFLKEGAAVIVIGIDTDDSGALELISELYEPFNRNHDRMLVMDIRSAELTKYAANGMLATKISFMNEIANIAERLGAD-PKDIQALIRTAEDKGYKPQLLQAVEQI----NNQQKYKLTEFIKSHFNSQLAGKTFAVWGLAFKPNTDDMREAPSRVVMESLWEAGATIQ-------YDPEAMDETQRIYGARDDLRLMGTKESALQGADALIICTEWQSFAPDFDMIKSRLKHPVIFDGR.................................................................................................. 421
10 -13.000IDP01235 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase BA_5512 [Bacillus anthracis str. Ames]  ali follow..  11  1...MKICTMGLGYIGLPTSAMFAKYGTEVVGVDIHQKVVDKLEEPGLGEVVKEVVANGKFPEEADAFIISVPTPCDLSYVLTATEKVLPFVKKGNVIIVESTIAPRSMDDYVKPLVEEA----DIYLVHCPERVLPGQIIVGGVTPACAEAGARVYGVFVEGE------IIKTNAKTAEMSKLMENTFRDVNIALANELTKVCNSLDI----NVLDVIEMANKHPRVNLHYPGPG---------GGHCLAVDPYFIVAKAPELANIIKLSRETNVSMPHYVTEKVKELLAGVENPKVAAFGVTYKGNVDDMRESPAMDVIDLISDFFELHSAEEAVKDAHLILVLTDHDEFTMNYDSLAPYMAKTVVFDTR.................................................................................................. 397
11 -12.600IDP00702 gene: cap5O; capsular polysaccharide biosynthesis protein Cap5O SACOL0150 [Staphylococcus aureus subsp. aureus COL]  ali follow..  15  1...MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLEEPGLQEVYEEVLSSGKLPDASDVFIIAVPTPCDISLVMRALDSILSFLEKGNTIIVESTIAPKTMDDFVKPVIENL----DIYLVHCPERVLPGKIIIGGVTEACIEAGKRVYRTFVQGE------MIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNI----NVLDVIEMANK...................................................................................................................................................................................................................................................... 241
12 -11.500IDP90565 ketol-acid reductoisomerase [Vibrio cholerae O1 biovar eltor str. N16961] VC0162 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  9  35LKGKKVVIVGCGAQGLNQGLNMRDSGLDVSYALRQAAIDEQ-SFKNAKNNGFNVGSYEQLIPTADLVINLTPD----KQHTSVVNAVMPLMKQGAALG----YSHGFNIVEEGMQIRKDITVVMV-KRGFGVPTLIAVHPENDPQGEGWEIAKAWAAATGGHRAG---CLASSFVAEVKSDLMGEQTILCGMLQAGSIVYEKMVADGIDPGYAGKLLQFGWETITEALKFGGITHMMDRLSNPAKIKAFELSEELKDLMRPLYNKHMDDIISGHFSSTMMADW------ANDDKDLFGWRAETAETAFENYPTTDVKIAEQEYNGILMIAMVRAGVEAFEAMTASIDESAYYESLHELPLIAN---TVARKRLYEMNVVISDTAEYGNYLFANVAVPLLREKFMP---------------KVGTDVIGKGLGVVSNQVDNATLIEVNSIIRNHPVEYIGEELRGYMKDM 487
13 -10.900IDP01969 gene: kfiD; putative UDP-glucose 6-dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1441c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  1...MKIVIVGIGYVGLANAILFSKNNNEVVLLDIDENKIQSINNVQNISKLHATSNIKEAYFNADFAVIATPTDYDEQLNFFDTRSIIKNINSKINVIIKSTVPIGYTKTIKQKFNMSNIVFSPEFLREGSADSLYPSRIIIGDKSV---LGKTIGDLFLKNIEKKNVDIFYMDSDEAESVKLFSNTYLAMRVGFFNEVDSYARKHNLNSADIIKGI............................................................................................................................................................................................................................................................ 234
14 -10.500IDP01494 UDP-glucose 6-dehydrogenase VCA0780 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  1...MKIAIAGTGYVGLSNGILLAQ-HNEVVALDIVVSRVEQLNDQHQPLNFRATCDKRDAYQDAQFVVIATPTDYDPQTNHFDTRTVVLAINPQAIMVIKSTVPVGYTKRIKQRLCCNNLIFSPEFLREGRADNLYPSRIIVGEKS---ERGQAFATLLAQGAKKMDIPILLTHSTEAEAVKLFSNTYLAMRVSFFNELDTYAETHGLDTKQIIEGV............................................................................................................................................................................................................................................................ 232
15 -10.400IDP00126 gene: mviM; putative virulence protein NT01ST1449 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  1MRTLRIGIVGLGGIAQKAWLPVLTN---QGAWSPSRDKALRICES----RIPYVDSLANLASSCDAVFVHSSTASHYAVV-------SELLNAGHVCVD--AENLRDAERLVALAAQKKL------------------TLMVGFNRRFAPLYRELKTRLGTAASLRMDKHRTDSDLRFTLLDDYLHVVDTALWLAGGEARLASGTLLTSESGEMCYAEHHFSADKLQI................................................................................................................................................................................................................................................. 209
16 -10.400IDP00951 gene: ycdW; putative oxidoreductase STM1135 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  134REEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV------ESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN--SELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPRVAMTPHIAAVTRPAEAIDYISRTIT................................................................................................................................................................................................................................................................................................................. 294
17 -10.300IDP05722 gene: tyrA; prephenate dehydrogenase [Bacillus anthracis str. Ames] BA_2954 [Bacillus anthracis str. Ames]  ali follow..  16  16....KVVLIGTGLIGGSLALAIKKDHVTITGYDIFQEQVERAKELHVVDEI--AVDLQHACEEAHL---IVFASPVEETKKLLHKLASFHLREDVIVTDVGSTK-GSIMNEAEALFSKEISFIGGPMAGSHKGVESAKAHLFENPNEHVEELKDWLKGTGSHFLVLNTEEH---GIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAA...................................................................................................................................................................................................................................................................... 227
18 -10.200IDP02492 gene: proC; pyrroline-5-carboxylate reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT1559c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  1...MKICFIGGGNMAAAMIAGMTSHGYDIIVFDRNEHKCLNLIKK----NINTSTSLLNTIKLADVLILAI------QNMFELIKNIRDTVTSTQVIVTVAAGIQTSAYEELFNKEISFARTIPSSLGYGATGIFFNKVI----AADKKDLVIDIMQTMGVVTVVEDIVAAIASSGPAYYFQFMEHMVEAAIKQGLDK............................................................................................................................................................................................................................................................................... 195
19 -9.950IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  1...MNIVVLGPGAVGSLWALHLHSAGHQVALWSRQAQPTITLQLDEEAPISFRNQNLDTLIHA------LLLITVKAWQVEAALQPLLPHLNRETILL-FATTTHGALKATLNQVSHTGFGQTQVGPFNALGARCDFIADVFNHALAPVTWNPEIQQALWRKLAVNCAINPLTAIHQCANGALVAPEFTPIITAILDEVTAVMQAEAISGEAEVYQVIQA-TAANLSSMHQDVFHRRPTEIDFITGYVV-----------RKGEQHGIATPVNSALYQQIKT........................................................................................................................................................................................... 288
20 -9.780IDP05340 putative oxidoreductase [Clostridium difficile 630] CD3450 [Peptoclostridium difficile 630]  ali follow..  14  1MKNIKMGMIGLGSIAQKAYLPILTK---VGAFTPNKVKREKICSD----RIMPFDSIESLAKKCDCIFLHSSTETHYEII-------KILLNLGHVYVD--ASTVSQGEELIELSTKKNL------------------NLMVGFNRRFCPMYKEIKNNATE.................................................................................................................................................................................................................................................................................................................... 138
21 -9.630IDP91227 gene: tyrA; T-protein [Escherichia coli CFT073] NT04EC3201 [Escherichia coli CFT073]  ali follow..  15  97SLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDW-----------------DRAADIVSDAGMVIVSVPIHVTEQVIGK-----LPPLPKDCILVDLASVK---NGPLQAMLAAHDGPVLGLPMFGPDSGSLAKQVVVWGRKPEAYQWFLEQIQVWGARLHRISAVEH-------AFIQALRHFATFAYGLHLAEE.............................................................................................................................................................................................................................................................................. 270
22 -9.580IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  2..QKNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDNNNSRLKAIQDWQANIIEFDSILVATPS----SGFKNTILELKECILPQQNIISATKGFCHDSYALLSEIAEDILPTTKFALLTGPSFAKETAVVVASKDINYARYVQELFSNENFRCYTTTDIIGAQVGGAVKNVLAITAGIAAGHAALITRGLAEIKKLGLKLGANSETFIGLSCLGDL................................................................................................................................................................................................................................................... 245
23 -9.450IDP02179 gene: proC; pyrroline-5-carboxylate reductase [Coxiella burnetii RSA 493] CBU_2090 [Coxiella burnetii RSA 493]  ali follow..  12  1MNTSNITFIGGGNMARNIVVGLIANGYRICVTNRSLDKLDFFKEK----GVHTTQDNRQGALNADVVVLAV------HQIKMVCEELKDILSETKILV---SLAVGVTTPLIEKWLGKASRIVPSSVRAGATGLFANETV----DKDQKNLAESIMRAVGLVIWVSSKIAALSGSGPAYIFLIMEALQEAAEQLGLTK............................................................................................................................................................................................................................................................................... 199
24 -9.380IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali follow..  14  4.FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNETLKAYCDLKASLEGVTDILIVVPS----FAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATE-LGQVPMAVISGPSLATETAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAISNARAALITRGLTEMGRLVSVFGGKQET................................................................................................................................................................................................................................................................. 236
25 -9.150IDP00140 pyrroline-5-carboxylate reductase, putative BA_0197 [Bacillus anthracis str. Ames]  ali follow..  10  2LTKHRILFIGAGRMAEAIFSGLLKTSKEIIVSNRSNV--EKLDQLRARYNVSTTTDWKQHVTSVDTIVLAM------SAHEELLAELSPLLSNQLVVTVAAGISPSYLEERLPGGTPWIMPNTAAEIGKSISLYTMGQFV----NETHQETLQLLLRGIGTSQLCTEQLTAVTGSAPAFLYYFAESLIEATKSYGVDE............................................................................................................................................................................................................................................................................... 199
26 -9.100IDP00461 gene: tyrA; bifunctional chorismate mutase/prephenate dehydrogenase YPO3285 [Yersinia pestis CO92]  ali follow..  14  97ELRPVVIIGGQGQMGRLFSRMLNLSGYQVRTLEQEDW-----------------SQAESILADAGMVIVSVPIHITEEVINR-----LPKLPADCILLDLASVK---NKPLQAMLAAHEGPVLGLPMFGPDVGSLAKQVVVYGRDPQAYQWLLEQLQVWGARLHRISAVEH-------AFIQALRHFATFAYGLHLAEE.............................................................................................................................................................................................................................................................................. 270
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;