current user: public

If you have questions about the server, please let us know.

Query: IDP02314 neutral protease [Bacillus anthracis str. `Ames Ancestor`] GBAA0599 [Bacillus anthracis str. `Ames Ancestor`], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .
# Score Template Links and tools%idFirst MKKKSLALVLATGMAVTTFGGTGSAFADSKNVLSTKKYNETVQSPEFISGDLTEATGKKAESVVFDYLNAAKGDYKLGEKSAQDSFKVKQAKKDAVTDSTVLRLQQVYEGVPVWGSTQVAHVSKDGSLKVLSGTVAPDLDKKEKLKNKNKIEGAKAIEIAQKDLGVTPKYEVEPKADLYVYQNGEETTYAYVVNLNFLEPSPGNYYYFIEADSGKVLNKYNKLDHVANEDKSPVKQEAPKQEAKPAVKPVTGTNAVGTGKGVLGDTKSLNTTLSASSYYLQDNTRGATIFTYDAKNRSTLPGTLWVDADNVFNAAYDAAAVDAHYYAGRTYDYYKATFNRNSINDAGAPLKSTVHYGSRYNNAFWNGSQMVYGDGDGVTFTSLSGGIDVIGHELTHAVTEYSSDLIYQNESGALNEAISDVFGTLVEYYDNRNPDWEIGEDIYTPGKAGDALRSMSDPTKYGDPDHYSKRYTGTGDNGGVHTNSGIINKAAYLLANGGTHYGVTVNGIGKDKVGAIYYRANTQYFTQSTTFSQARAGLVQAAADLYGASSAEVAAVKQSYSAVGVNLast
1 -159.000IDP02314 neutral protease [Bacillus anthracis str. `Ames Ancestor`] GBAA0599 [Bacillus anthracis str. `Ames Ancestor`]  ali  100  1MKKKSLALVLATGMAVTTFGGTGSAFADSKNVLSTKKYNETVQSPEFISGDLTEATGKKAESVVFDYLNAAKGDYKLGEKSAQDSFKVKQAKKDAVTDSTVLRLQQVYEGVPVWGSTQVAHVSKDGSLKVLSGTVAPDLDKKEKLKNKNKIEGAKAIEIAQKDLGVTPKYEVEPKADLYVYQNGEETTYAYVVNLNFLEPSPGNYYYFIEADSGKVLNKYNKLDHVANEDKSPVKQEAPKQEAKPAVKPVTGTNAVGTGKGVLGDTKSLNTTLSASSYYLQDNTRGATIFTYDAKNRSTLPGTLWVDADNVFNAAYDAAAVDAHYYAGRTYDYYKATFNRNSINDAGAPLKSTVHYGSRYNNAFWNGSQMVYGDGDGVTFTSLSGGIDVIGHELTHAVTEYSSDLIYQNESGALNEAISDVFGTLVEYYDNRNPDWEIGEDIYTPGKAGDALRSMSDPTKYGDPDHYSKRYTGTGDNGGVHTNSGIINKAAYLLANGGTHYGVTVNGIGKDKVGAIYYRANTQYFTQSTTFSQARAGLVQAAADLYGASSAEVAAVKQSYSAVGVN 566
2 -139.000IDP01752 gene: nprB; neutral protease B [Bacillus anthracis str. `Ames Ancestor`] GBAA5282 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  40  1MKKQVISSALALTVIAGGFGTFGATTTKAEE--QKIQYHQEFKTPAYIGEEWKAPEGLDKKETVFQYLESKKDMFKL-AGNIDKHFNVVGEEKDAESGTTHVKLVEKHNNIPVYGSDQTVTLDKENNVKAFFGQVIPNLEDK-NIPEFASISAEQAETIAKADIEKELKNYDGVKKDLFVYEKDGKYYLAYLVKASISKPAPGYWHYFVDATNGNVIEKYNAVDHITGF---------------------------GYEVLGARQSFEIAQDEKTGAFNLFDGKRGQGVHTFDADNMDENLFNIFSQVESKNKFFDDKAAVDAHVNAGKVYDYYKKTFNRNSFDDKGAKLISSVHVGENWNNAAWNGVQMMYGDGDGTTFISLSAGLDVIGHELTHAVTEHTANLVYKNESGALNESLSDIMGVMVEKK-----SWDLGADIYTPGKPGDALRSLKDPASIPNPDHYNKRYTGTADNGGVHINSSINNKAAYLVSDGGEHYGVKVTGVGREATEKIYYRALTKYLTANSDFKMMRQAALQSAEDLYGKDSKAVQAVTKAYDAVA.. 547
3 -134.000IDP02702 neutral protease [Bacillus anthracis str. `Ames Ancestor`] GBAA3442 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  30  1MNNFVKLGLTTGVVLSAIIPYGGVHAATED-------LKVETKEDTFRTGNLTAPSQKSAENVVKDALKGKTEQALSSKTESKVNYNVTQSRKSY-DGTTLVRLQQTYEGRDVYGYQLTAHINDDGVLTSISGDSAQDLQQQEDLKQPIILSEEDAKKQLFKIYGDNLTFVEEPEIKQVVYENTNKATNAYQITFSASTPEYVSGTVLIDAFVGDLLKELVQKLGIQVDSSIVQSATANKSQDPSK--------LTGTGKDDLGMNRTFGITQSDGTYTLADYSRGKGIETYTANYKDYNNYR--DLVTSNSTNFTDPKAVSAHYLATKVYDFYKEKYSRNSFDNNGQKVISVVHGWNTNGKNIGNPKFNAFSNGAMLVYDPIVRAFDVAGHEFTHAVTRNESGLEYAGEAGAINEALSDILGVAVEKYANNKFNWTMGEQS------GRIFRDMKNPSSISSRYPEDYPIDADHDYGGVHTNSSIINKVAYLIASGGNHNGVNVQGIGEDKMFDIFYYANTDELNMTSDFKELKEACIRVAMNLYGKDSLEVQAVQQAFKAAYI. 565
4 -134.000IDP02404 neutral protease [Bacillus anthracis str. `Ames Ancestor`] GBAA2730 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  32  3NKKTLTKVALTTGLALTAVAPYGVGHAEET-----DQLQVQIQEESFRSGELTQPSQKAPENVVKDALKEKTEQALSPKGETGVDYKVLQKRGSY-DGTTLVRIQQTYEGKEVYGHQLTAHVDNSGVIKSVSGDSAQNLKQE-ELKKPINLSKDEATQYIYTKYGNDINFISEPEVKEVIFENNGQASNAYQVTFEAATPNYISGTYLINAQNGDMLKNMVQESNLKASEKLVGALK--------KSKKSSLTSLTGTGKDDLGISRSFGISKSNGKYALADYTRGQGIETYDVNYRDITKEESYYPGTSTSTTFNDPKAVSAHYLATKVFDFYKDKYNRNSFDNQGQKVVSVVHAPKNWQNALSANNGSMLVYGDP-----IVKAYDVAGHEFTHAVTSSESNLEYYGESGAINEALSDIMGTSIEKYVNGSFNWTMGEQT------GSVFRDMENPTSVPSSLGVPYNDFNGWDQGGVHFNSSIINKVAYLIAKGGTHNGVTVKGIGEDKMFDIFYYANTDELNMTSNFKELRSACIRVATNKYGANSAEVQAVQKAFDAAKIK 567
5 -128.000IDP02657 gene: mpl; Zinc metalloproteinase precursor [Listeria monocytogenes EGD-e] lmo0203 [Listeria monocytogenes EGD-e]  ali follow..  29  1MKSKLICIIMVIAFQAHFTMTVKADSVGE-----------------------EKLQNNTQAKKTPADLKALPDSCEAK--DFYKNFKILDMTKDK-LGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQL---RITNQIKITEKNAIEKAFEAIGQSKSYVGNPVKEKEIILNSRTKRLVYNIKLIFAEPEVASWIVQVDVETGAILKKQNMLSEVERADTHKDFQA-------------------LGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGVVSNKTNMFTDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGQEILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGS-----RDGRIRSIKDPDKYNQAAHMKDYETEEGDWGGVHYNSGIPNKAAYNTITK----------LGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASK--KVAEAWEAVGVN 510
6 -104.000IDP00170 gene: hap; hemagglutinin/protease VCA0865 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  26  1MKMIQRPLNWLVLAGAATGFPLYAAQMVTIDDASMVEQALAQQQ--------------------------------YSMMPAASGFKAVNTVQLP-NGKVKVRYQQMYNGVPVYGTVVVATESSKG-ISQVYGQMAQQLEADL-PTVTPDIESQQAIALAVSHFGEQSLPVENESVQLMVRDDNQQAQLVYLVDFFVASETPSRPFYFISAETGEVLDQWDGINHAQAT---------------------------GTGPGGNQKTGRYEYGSNGLPGFTIDKTGNSAVKTVNLNGGTSGSTAFSYACNNS-VNGAYSPLNDAHFFGKVVFDMYQQWLNTSPLTFQLTMR---VHYGNNYENAFWDGRAMTFGDGYTR--FYPLVDINVSAHEVSHGFTEQNSGLVYRDMSGGINEAFSDIAGEAAEYFMRGNVDWIVGADIFKS---SGGLRYFDQPSRDGRSIDHASQYY---SGIDVHHSSGVFNRAFYLLANK--------SGWNVRKGFEVFAVANQLYWTPNSTFDQGGCGVVKAAQDLNYNTADVVAAFNTVGVNASCG 503
7 -78.100IDP02272 neutral metalloprotease, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA2183 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  19  1MFNKKMVAMAMTVPLVMGTLSTVSAVETKKQ---------------------VKVEAYSPQKKAIEYLKGNANQYGL----KPDLSDLQYISTTETPVASYVRFQQVVNGAPVFSNQITVTLNGEGKGVLAVSDYQPIKAVK---QVTEKISEKDAIQKSMAYVGEASELWAPTEKEFGYIIEEGIARPVYKVVVHSNNP-FGAWETFIDAENGKLIKKVDINRKVEGTGKVFLPNPVVSSGSL-------------AGLKDNNDADSTALTNQLKTVTLKGLDGTGFLIGEYVTISSKARTKSTNLQFNYTRANDSFEDVMSYYHIDTLQRYIQSLGFQNINNRS----IKVNVNGTTADNSFYSPTTKALTFGTGGV--DDAEDAGIIAHEYGHSIQDNVPGFGSSAEGGAMGEGFGDFLGATYEDAVSGYGKACVGEWD-------AAAYSSSDPTCLRRLDT--NKVYPKDMKNQVHADGEIWSQGQYEMAQA----------FGRDVATKIILQSHW-SLTPNSKFSDGAKAIKQADALLYG--GQHAADIDRIWAARGIS 501
8 -11.500IDP05266 hypothetical protein lmo0047 [Listeria monocytogenes EGD-e] lmo0047 [Listeria monocytogenes EGD-e]  ali follow..  1MYKKLATVGMTVLLVGALSAFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDA------------EISSVELEKSLGKYVYKVDGISND-----NEYEMKFNATKEQLSDETDRLDR-KENEKLSLDGIKSPKEAMDKAVSEQAGDVTSWK----------ERELDTTYYEVTVKQDN---NKYEIKLNAKTLEILQT........................................................................................................................................................................................................................................................................................................................................................... 199
9 -9.690IDP00033 immune inhibitor A metalloprotease BA_1295 [Bacillus anthracis str. Ames]  ali follow..  11  1MNKKPFKVLSSIALTAVLGLSFGAGGQSVYAETPVNKTAT-------------------------------------------------SPVDDHLIPEERLADALKKRGVIDSKASVEKYVENKKGENPGKEVTNGDPLTKEASDFVKKVKDAKADTKEKLDKPATGTPAATGPVR----GGLNGKVPTSPAKQKAYNGDVRKDKVLV------LLVEYADFKHNNIDKEPGYMYSEDFNKEHYEKMLFGDEPFTLDDGSKIETFKQYYEEQSGGSYTVDGTVTKWLTVPGKAADYGADAATGHDNKGPKGPRDLVKDALKAAVDSGLDLSEFDQ-FDQYDVNGDGIDHLMIIHAGVGQEDAIWSHRWTVGPEGFDYTIEPEDGAVGVFAHEYGHGLPD-----EYDTQYSGHGEPVQSIMSG.............................................................................................................................................. 405
10 -9.290IDP00006 immune inhibitor A metalloprotease BA_0672 [Bacillus anthracis str. Ames]  ali follow..  10  1MRRKAPLKVLSSLAIAAIIGCTSVMSA----------------PLAYAETPAKEKENVSTTPIDYNLIQEDRLAEAL-----------------KERGTINPASSKEETK-----AVEKYIEKKQGDQANKEILPADTAKEASDFVKKVKEKKMEEKEKVKKPEKNVSPEQKPEPNK----KQLNGQVPTSKAKQAPYKGSVRTDKVLV------LLVEFSDYKHNNIDQTPGYMYSNDFSREHYQKMLFGNEPYTLFDGSKVKTFKQYYEEQSGGSYTTDGYVTEWLTVPGKASDYGADGSSGHDNKGPKGARDLVKEALHAAAEKGLDLSQFDQ-FDRYDTNSDGIDHLMVIHAGVGQEDAIWSHRSKLAIEGHDYTIEPEDGAVGVFAHEFGHGLPD-----EYDTKYTGTGSPVESLMSG.............................................................................................................................................. 410
11 -9.070IDP02151 hypothetical protein GBAA3159 [Bacillus anthracis str. `Ames Ancestor`] GBAA3159 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  18............................................................................................................................................................................................................................................................................FSSVGVSEAYVKEGWKLPSKSATYKWGDRLDDGSSIIKSG-SAWYTASRINFTVSASSVNTLNSWFESSSTYYGRTSTKKVTKFAGDINAGNTNITKSNVAK-----------------STGVHEFGHAI-----GIGHNSGTSIMNSNRNDKNGV.............................................................................................................................................. 171

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.