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Query: IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRKKTTNILast
1 -107.000IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali  100  1MKQRKTSVLHVLLVVTAILGISLWVNASHGMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDDKNDKDKLTIKANDSADATSTKLPKTSDDSSMIPTILGTLFIGGAILILRKKTTNI 490
2 -57.000IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  41  61AGKSNVTDTVTQADLDGITTLSATIEGVQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNL----TSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNDNPNPDDP----TTNTPTGNGDGTSNPSNSGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKTIK.. 546
3 -55.700IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  38  214ISSNKVSDISVLAKLTNLESLIATNNQISDLTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQP----LKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKST--TQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTWDFATDKMPANDITLYAQFTKN. 706
4 -52.600IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  31  150LVDNDISDLRPLANLTQMYSLRLGGNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPLANLTKIQYSDFSNQMITNLERETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGAVT--EEVVNYDALIPEPTSPSKTGFTFEGWYDAEVWDFKTMKMPANDITLYAHFSKE. 738
5 -47.100IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  34  59LGKADVTDEVTQTDLDSVTHLSATIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSG----TVTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPINVEPNDN........................................................................................................................... 427
6 -44.000IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  15  34IKAAQDVVNIPDPALKSYLNGLLGQPSTSQMDTITDVTISNASLTDLTGLDYAHNLTILHLTNTGVTDYSLVANIPSLTNLNISGSNLTTIPDLNGLTNVTNLNLSSGKLDALTKFNKLPNLTFLNLDNNSITDFMPLKSLPNLASLFIQFCGVNDFRGIDSFPKLTNLAAFGQNVGSAILINSTIKSSALNYNEANQTIFVPFTLMTELNGVQISGSRLSIDDTGVTVSGITKDFFDSITKMEYNAFYDNPAGSYNSPPNFNSYSVSSGTYDHYFDIDHSLTITNDSAISYGEQTTVTEEQFLKDVHAETDDGTPVTSDFNTIVDFSKPGVYTVTLNAENAAGLKATPTQVTVTILAKPVITADKSISYQQFLQDIAAKTSDGSKVTSDFDSVVDLAKVG-SADGLNADPVIILVNVVAGNEPPTPPGPGPDPTPGQSAKSEIASNPSNSEVNIALPNTGDASQATTVLIGIILAGVAILFFRKRKHS. 589
7 -42.300CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  38 1078...NQVTDLKPLANLTTLERLDISSNKVSDLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIG-KGTTTFSGTVTQPLKAI---FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKST--TQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTWDFATDKMPANDITLYAQFTKN. 1589
8 -41.100IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  16  3LNTNEILDYSALKYMPNLKSLTVANAFFANLKQLNHLALRGNEFSDVTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITNVAPLSALKNVTYLTLAGNQIEDIKPLYSL-PLTDLVLTRNKVKDLSGIEQMKQLEELWIGKNEIKDVTPLSKMTQLKQLHLPNNELKDITPLSSLVNLQKLDLEANYISDLTPASNLKKLVFLSFVANEIRDVRPVIELSKTAYINVQNQKVFLEETEVNKEVKVPIYEKDGKISTKIRLKGEGGTY............................................................................................................................................................................................... 306
9 -40.900IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  21  61LKLPAATSSVTQTQLNTIKALHFDSKGVQSLENLTQVFGYGNQVSDLGPLSNLTKLEVIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPIKNLTNMLELNVSANPISDINAVKNMTQLEFLTLRDCEVSDLSPVENLSNMLMFWAGRNNISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTLETLTLSFNQIIDISPLKNLTNLTRLELENQ.......................................................................................................................................................................................................................................................... 306
10 -40.500IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  13  58LGQASTANITE-AQMDSLTYITLDLTGIEYAHNIKDLTINNIHATNYNQISGLSNLERLRIMGADVTSIPNLSGLTNLTLLDLSHSAHDDLTKINTLPKVTSIDLSYNAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKSTASSDTYFTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNLEKMEYNARIDLSYQSYNTPEQFQNGGSYTISMPIYDHYFTVDHSLNITADSEKQLVTEATFLSDIHAKTDDGSTVTSDFADKVDFNTPGTYTVTLQSENVTIKAKTTITADEKITYKVDTSKTEAAFLADIKATTNDGTAITSDFATVVDLSKPGVTLNAENDLQKALPVQVMVI-TPNPVINPNVNKPEVPSYKIPSLTVNEKKAKAEPSKEALPKTGDSLPVAGATVGFLLIGLSWFVSRK..... 597
11 -39.400IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  21  39TVPTPIKQIFSDDAFAETIKDNLKKKSVTDLNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVY------TVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVFKAETTEKAVNLTRYVKYIRGNEDNSLKQGTLASHRCKALTVDREARNGGKLWYRLKNIGWTKAENLSLD-GNSVWTKPYNTAGAKHVNKLSVYQGKNLREAKTPITTWYQFSGWVDTRALNYKQSMEKPTRLTRYVSANKA. 568
12 -37.900IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  21  88AINKGIKSIEGVEYLQNITELDVEKNPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTANVEDISPVKNLVNLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLTNLNTLWLYNAQIRNIDFTANLPKLKSVYLYNNQISNISEVSNWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITNREI......................................................................................................................................................................................................................................................................... 318
13 -37.500IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  13  1MKKLFLATICMFIMIYPSTAAHAEETNITQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVKLFVDLNGLVNLQSLSINGSEVTHFKTFNKLPKLTYLYAQNSKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALATGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVD-QAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS.. 605
14 -37.100IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  17  557GKKEGITDFSGLEFMTNVEELTLQNVNMKNLRNLKSVDLSYNQIEDIKPLHSLEDLEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNADGIHQLENLDALLVNNNEINNLDEISKVSKLNKLEMMSNKVRDISPLASLKNLQWLNLSDNKIQDISTLSSMLDLLSLKLAGNEIRDVRPVIQLAQWITVDIKNQKIVLEGQMNQEIQIPIYDLEGEIFEDIELKSTDGIVTDRGTVVWKTPGAKIYS-----FSLNGNYHGLSLLFSGTVTQNIVAKEEPKEPVEEVEGSKEEPIKEAEGSKEEPKEPAKEVEGSKEEPKEPAKEVEGSKEEVKEPAKEVEGPKEEVKEPTKEVEGPK----EEVKEPTKEVEGPKEEVKEPMKEVEGSKEEVKGPTKEAEGSKEEVKEPTTEVEGSKEVKEPGKEVEG-KVVENQNMKENKPAVTKQEESKKSLGATGGQENTSTLLSGLALVLSALSMF....... 1061
15 -36.800IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  14  37LKESQDVVNIPDPQLKKELNLYLNQAENAQMATFRNITLNSG-IKDLTGIEYLKNITTLSIN-NINASYEPIQTLSSLEKLVINGENVNAIPDLSVLSNLTFLDLSRTNIDDFSKISNIPNLNKLDISNNKITKISELNNLPSLQELRVSDCQITNFKGIEKFPNLTAFYGDGQLFGSIVTVNTILNYDGLSLPYNTNPDYTSIALGDQSYVVTNDKISINQLSDFTQADFDELEAFEVYLGFDSGNISKPANLANGTYSLKQIGSYRAFSVDHSVNITAQDNISYIQNDTVTPEKFLTDIKADANGGTITSDDFTKPGNYTVTLNAQNTKGLKGEPIQVTVTIIEKTVITADPEVTYDLNEAITEEEFLAEIKATTNDDTMITSDFESAVDFTKAGETLNAENDTQKAAPLTVKIRVNPKLPDPVVPIPYSDDGGVQHSNSRNPRISISDSSLEKLPKTGDSLPESGVLLGFLTLALGIVIRKK..... 593
16 -36.800IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  16  60MATITVADLSNMSGAPGYPVTG-DLTGLDKAVNMTKLYFSNSQIKNLDKIKNLPNLKKIVAVTTGLNNISALGEMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWSEFKNFTKLKSLVKLDLTWNNITDLSPLTENDHITNLNLNYNQFTNVAPIATMKNLKVLYLNNNNLTSIDALNTLRGLTIAYADNNNITDLSNLKNFFEAMVAQGDYEGLQINNQTITLPT................................................................................................................................................................................................................................................................... 303
17 -31.500IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  25  16AFIVPVYSKAVETGKEVPKSPELLDDKSSTLKNVNTPIPANSTIADLFPDEGMAKFQTPTKTDWKVDDVVTEVELNRMWYLTS-VATIGSIEGIQYLPNLYDVRLQDKQCKDLSPFNGYSQLYRLNINNGNISDISPLTELSTLNDIDLGGNNISDLSLFPKLPNLEEISLERNNISDVSPLAKFTKIKIFNLDENHITDLSSLTKMPNLQRLYVRYQTLDMEPVVTSSK.................................................................................................................................................................................................................................................................... 281
18 -31.200IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  19  374ADSCAIEDLGTLNNLPKLQTLVLSDNAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFN.......................................................................................................................................................................................................................................................... 620
19 -31.100IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  15  92ENSKTYAELFPDVNLAKIIAKNISGTSEAELQTITNLVATNQNITSLTGIEHLTALENINVNNNELTTIDSLFNIPTLKSISANNNKITGFSLVKTLPELHTLEVLGNAITELD-IENQPNLVTLSADELELKKLTTLMNLPEIISVDISGNYLDSDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKIDRLESSKLVDVPKLATLNADK............................................................................................................................................................................................................................................................................... 345
20 -28.500IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  17  58LNKDSVNDVIDQDDLDALTGLGFETSTITNVTDVSIMEFGAKEFPDITTIPHLKTLFFADPPGRLTRNLSLYQNYPEMDTITMSGNNLISIPDFTGMPALKQLYMSEMLITSDELFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNLPKLTDLNLRHNNLTGTVNYTNLPSLESLNLDYNFLTEL................................................................................................................................................................................................................................................................................................. 279
21 -27.900IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  14  58LNKDSVNDVIDQDDLDALTGLGFETETITNNVNIVSVMEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTRDYQNYPEMVTITMSGSNLIGIPDFTGMPDLSQLYMADMMITSDDVFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTTNFTNLSNLNNLNLDYNHLNELPS..................................................................................................................................................................................................................................................................................................................... 259
22 -27.800IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  10  16LPAPIIEAFEAIAEAIAGELDKDSVNDT-TAIPLPSLGLTGEDLSVL-NNEVFTNAIELAIWSNNIGELDLSEALPALENIEANGANITVF-PDANYPNLTNVDLSQNNFGFNPKFVGMEGLVSINMENAGLSGYDIWMNMPNLDSLILNENHLISIEDIFLSQQLGTHSFANQTATYPTTIKQGENLKVFVPFIYQALD.................................................................................................................................................................................................................................................................................................. 230
23 -26.000IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  12  10LLVLFMTVLFQMLEAQAASTSWIEQEGNEPFIAETEKILSKNRQDIT--LADLETIQKIHV--FGADSINKISDYKNLTALEANYGTITEVESVGSLKELVTLNVDENNLQEFMVIFQLPKLEVLYISRGNITEIPTITTLSHLKVLDVSNQKLVTIDSILTTNWKAMHDGKLGMSLAGNQIASDIPANYLDNFNSGGNMLEPTIDYLQKQDQLTYTGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQHEFMYYDDGTSANILTNGVATDVGDGYITIKSTLSTNSNPFAKVRVPIKV-QYLDSNGDTLATPDILSGNEGDAYASTPKTIDGYTLTQTPTNAQGTFTEEPQTVIYNEEGKILTASDNLTGNVDDPYQTKAAGYTLSGVFKTNAQTVTYVYKTISIKAHDSTMNVG-AKDNFDSAVDSLGVAVPFDEVKVDGSVDTTKAGVYPVTYSFAG............................. 523
24 -25.600IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  89LDNNQLTHFD-ATNYDRLVKLSLNSNTLESINSITHISMNNNCLRNI-DIDRLSSITYFSAAHNKLEFV-QLESCEWLQYLNLSHNQLTDIV-TGNKEELLLLDLSHNKLASLH-NALFPNLNTLLINNNLLSEIKMYSNFCKVQTLNAANNQLEKIHFLTYLSSIKSLRLDNNKITRIENTSDIRSLFPIIKKSESLNFLNI............................................................................................................................................................................................................................................................................................... 298
25 -25.200IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  14  109ARSQGIEDSTGIEYLTGLEVLNLEDNQLKSILNLKELTCSNNPLANLD-VSKNLALEELTCENNELTQLD-VSQNTALEYLYCPRNQLTKLD-VSKNSALRYLACDVNQLTNLD-VSKNPALTNLGCTKNQLTDLD-VSQNPNLGTLVCSDNQLTNLD-VSQNQALENLACDNNELKNID-INQALSLKELSCENNQLTNLD-TTQNLALEILYCDDNQLTDLDVRKNVN.................................................................................................................................................................................................................................................................... 335
26 -24.800IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  17  6IVIASLVSLT-MVSNPLLTFAATNDVIDNTTKETSSTQPTIKNTLKAGPDDNFASEVAAAFEMQATDTIS-EEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD-LSQNTNLTYLACDSNKLTNLD-VTPLTKLTYLNCDTNKLTKLD-VSQNPLLTYLNCARNTLTEID-VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKL.................................................................................................................................................................................................................................................................... 243
27 -22.600IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  23  1.....MKKAFLCLSAIVLSLNFVWINPITGKETNQQVNLKNNVTDDLGGQTWLINEVNRQLAPKTVDVNLTFEDLAKITTISLNNRSLTG-PEIKNLVSLQRLYLFSNKLSGEIPLGELTKLTELRLDYNELSGKIP-DGLGNISEIALQNNRLVGQIPLSNRTGKNEVNVSGNQVT......................................................................................................................................................................................................................................................................................................................... 191
28 -20.300IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  14  182LSSLSLGSVPPL--PEWIEMLSLVYNELDSIESCKELELDFNNLTEF---QVPDGITLISVNNNLISYIDSF--PPKAKKIFICHNKLSEIP--ALPDTAKVFDCSENNIKEIRWF--PKNLKEAYIEYNKIEVIPAI--PGNLKLLCMKCNPIKEALMPWTLTGIRYEISQRKYIVMNADYDKYSDMVKKHVIDGEEFII................................................................................................................................................................................................................................................................................................. 375
29 -20.100IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  15  175...............LHSNELDLSYLFLGSVDWIEMLSLVYNELDSIQVPESCKEL---ELDFNNLTEFPQV--PDGITLISVNNNLISHIDSF--PPKAKKIFISHNKLSETPAIPD--TAKVFDCGYNKIQEIRYF--PKNLKEARIGYNNIEVV--PAIPGNLKILFMECNPIKEAFLMWTLTGICYEISQRKYIVTN................................................................................................................................................................................................................................................................................................. 352
30 -20.000IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  19  774VGPTECAALAVLQHLRRPVALQLDYNSVGDLGVCKALYLRDNNISDIECALHCEQLQKLALFNNKLTDAKLLACRQNFLALRLGNNYITAAEGLRGNTSLQFLGFWGNRVGDAEALGDHQSLRWLSLVGNNIGSALMLAKNVMLEELCLEENHLQDAEGLKKNSSLKILKLSNNCITYLQALERNDTILEVWLRGNTFSL.................................................................................................................................................................................................................................................................................................. 1025
31 -19.500IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  12  1................MLKKIFIALIALVVIINTVSFTSVSASTPTWLEQTMNNNEPFIKEIETETGKTRANITQTDLEAIALRVTGASDIANIDMLTHLTLLKAVQGTISSVNSVGNLKELKILNLNTNHLSNFPTVYQLPKLEELQLNDGTIEEIPA--------------------TITNMASHLKFLTVNNNRLVKVPTIIFSTNWSNSSTGELDLFTTGNQIVTDIPANYVSNFNNGQNMLEFYDGQFQKQDQLTTTPGYTIDVPVGTDFNQLTPDKTKLALTSGRTLLAQHEFEYYDDGSSSLIHNGVAAAPGQATIFIKSKFSTQSNKFARTQVTVNIAALNGGPITVKHDTKGQELAPPVILNGKDGDPTQKTFPGYTLVATPANQNGAFT---------LNPATVNYVYSANDYKLT-DAQGQELKAPVVDTKDYHIQDNYTTTAA--TIPGYSLVSTPANQNGTFGAGNVTVYKKDDYTL 457
32 -17.100IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  20  43..................ASVDCHGLGLRAVRNAERLDLDRNNITRIMDFAGLKNLRVLHLEDNQVSVIEAFQDLKQLERLRLNKNKLQVLLLFQSTPKLTRLDLSENQIQGIPAFRGITDVKNLQLDNNHISCIEAFRALRDLEILTLNNNNISRILSFNHMPKIRTLRLHSNHLY......................................................................................................................................................................................................................................................................................................................... 218
33 -14.000IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  9  6QLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYL---QLPNEITSVTIENNNLTTLTGL--PVNTQNLSVINCEKLQITDMP--STVKNLHIELTDSPFIHFIS--EGIECLTVCHCYISGVP-----ESVRYLEIKGSATDSIKNV--PNGLSSLSINSYNPENQARIDNSPSLKTLSLTG....................................................................................................................................................................................................................................................................................................... 188
34 -13.400IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali follow..  12  199.TAPSLLTTEGMKNCSNLMEVDLSGLDTSAVTALEELDVSHFDTSSVTNMSYMRNLEVLDVSNLDTSSVTNMYAMTSLEELDVSHFDTSSVTDMYRVEKLKKLDVSNFDTSSATAMVQMSALEKLDVSNFNTSLVTDMRAMTSLEALDVSNFDTSSVTNMAAMEKVEKLDLSTFDTSSVTNMGTMTALKSLYLDNTHAASSTDMFTGTTSLSYLFVSHNVSNFNGLENTNWYDEKNWVQFETLSQ------------LQTYHRKQSEPTGYRKGAFLSLTMDAMGGQFEDAEEQKVQNKFSGEYWEEVIPVKEGHYFDGWYLNQDCTNKFDFSL--PADASITIYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVG---LNRTATSISESNKLTLTNTADTTVQCLAPLSWDGSETN.................................................................. 644
35 -12.400CPX_91686_91680 Complex of A1L467_HUMAN with INLB_LISMO [Undefined organism]  ali follow..  19 1460.........................AVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIG-KAKARFHGRVTQPLKEV---YTVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVFKAETYKLPREDNSLKQGTLASHRCKALTVDREARNGYRLKGWTKAE--NLSLDRYDKMEYDKGVTAYARWTKP-----YNTAGAKHVNKLSVYQGKNLREAKTPITTWYQFSGWVDTRALNTFYKQSMEKPTRLTRYVSAN. 1957
36 -11.400IDP91710 gene: NXF1; nuclear RNA export factor 1 isoform 1 [Homo sapiens] NP_006353 [Homo sapiens]  ali follow..  15  183.ENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSDLKGLRSDPDLVAQIDVVLNRRSCMAATIEENIPELLSLNLSNNRLYRLDDMSSIPNLKILNLSGNELKSERELDKIKKLEELWLDGNSLCDRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSL....................................................................................................................................................................................................................................................................................................................... 386
37 -11.100CPX_91710_91752 Complex of NXF1_HUMAN with TIP_SHV2C [Undefined organism]  ali follow..  14  163.....VEDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPVEQLKLIMSKRYDSQQALDLKGLRSDPDLVAQNIRRSCMAATLRIENIPELLSLNLSNNRLYRLDDMSSIPNLKILNLSGNELKSERELDKIKKLEELWLDGNSLCD.............................................................................................................................................................................................................................................................................................................................................. 329
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.