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Query: IDP04625 glycosyl transferase, group 4 family protein [Bacillus anthracis str. Sterne] BAS5050 [Bacillus anthracis str. Sterne], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDSQVIYAILASFITVLVVTPLVIKLAFKIGATDKPNARKVHQKIMPRLGGLAIFIGVAVGFVVGGLYEQRMLSITLGAIIIVIIGILDDMYELSAKVKFGGQLLVAIMIVKSGLLVQVLYIPILGDTELGWLAYPITVFWIVGITNAINLIDGLDGLSAGISSIVLATLAYMAFTSPWGTGTAIILPLALIALASTLGFLFYNFHPAKIFMGDTGALFLGYCISVISLLGLYKSVTLFSFIVPVIILGVPVFDTTFAIIRRIVNKKPISAPDKSHLHHRLLAMGFSHRKTVLIIYAFGIFFSVNAIIFSSATLWLSIILLFILIFFTEIIAEVIGLVHERYKPLISFYKKVKKREDLast
1 -107.000IDP04625 glycosyl transferase, group 4 family protein [Bacillus anthracis str. Sterne] BAS5050 [Bacillus anthracis str. Sterne]  ali  100  1MDSQVIYAILASFITVLVVTPLVIKLAFKIGATDKPNARKVHQKIMPRLGGLAIFIGVAVGFVVGGLYEQRMLSITLGAIIIVIIGILDDMYELSAKVKFGGQLLVAIMIVKSGLLVQVLYIPILGDTELGWLAYPITVFWIVGITNAINLIDGLDGLSAGISSIVLATLAYMAFTSPWGTGTAIILPLALIALASTLGFLFYNFHPAKIFMGDTGALFLGYCISVISLLGLYKSVTLFSFIVPVIILGVPVFDTTFAIIRRIVNKKPISAPDKSHLHHRLLAMGFSHRKTVLIIYAFGIFFSVNAIIFSSATLWLSIILLFILIFFTEIIAEVIGLVHERYKPLISFYKKVKKRED 357
2 -80.500IDP05066 gene: mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [Clostridium difficile 630] CD2654 [Peptoclostridium difficile 630]  ali follow..  22  7LTYTALIAFLIVIIIGPIFIPMLRKFKFGQTVRDDGPQTHLAKNGTPTMGGIIMIVAILITGLTRVKVSHDMAVGLICIAGFGFIGFLDDFIGLKAYQKIILQVALSFYVAFYQYTSSSSASFTDFVINVGILYIPIMMFIIVAIVNAVNLTDGLDGLASGVTLIVSVFFMLFASSIA---GNTEVAVLAAATVGACLGFLGFNSYPARVFMGDTGSMALGGAVVAFSVLTNSV----LIIPIIGGIYFAEALSVLIQVGYFKATRKRFF--KMAPIHHHFEQCGWPETRVVFIFWIITVVLAWISIIA................................................ 319
3 -79.700IDP04612 phospho-N-acetylmuramoyl-pentapeptide-transferase [Bacillus anthracis str. Sterne] BAS3764 [Bacillus anthracis str. Sterne]  ali follow..  24  6LLVTAGVAFLISVALSPLFIPFLRKLKFGQSIRDEGPKSHQKKSGTPTMGGIVIYVSMMVTSLIMAIKGAEVSLLLLVTFGYGLIGFLDDYIGLTSKQKLVGQLVIAIAFFFIGKGQAFHTYIMDVKFELGWAYFVLVLFMLIGGSNAVNLTDGLDGLLSGTAAIAFGAFSIIAVA----QEQFGVAIFCMAVVGAVLGFLVFNANPAEVFMGDTGSLALGGAIAAVAILLKQE----LLLVIIGGVFVMETLSVIIQVISFKTTGKRVFKMSPLHHHYELC--GWSEWRVVVTFWSVGFLLAVLGIYIG............................................... 321
4 -75.000IDP90831 gene: mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [Yersinia pestis CO92] YPO0552 [Yersinia pestis CO92]  ali follow..  20  28..VSLLTALFISLWMGPHLIAWLQKLQIGQVVRNDGPESHFSKRGTPTMGGLMILFSITISVLMWAYPNPYVWCVLFILIGYGIVGFIDDYRKVVRKNTKGLIARWKYFWQSIIALAAAFTMYSIGMPQLGLLYVLLAYFVIVGTSNAVNLTDGLDGLAIMPTVFVAAGFALVAWATGNVRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGTIAVLLRQE----FLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELK--GWPEPRVIVRFWIISLMLVLIGLATLKVR............................................ 360
5 -8.750IDP90887 gene: menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Yersinia pestis CO92] YPO0104 [Yersinia pestis CO92]  ali follow..  15  22.......................................................................................................LPLAFASIVTGSALAVWLDSFKPAV---ALLALLTAGLLQILSNLANYGDAVKGSALIITVILTIISGIALIAVACEKPSDILGFLLLGLMAIVAAIT-YTVGRKPYGYMGLGDISVLVFFGWLSVAGTY-QAGHFDSIVMLPATACGLLATAVLNINNLRDIENDKANGKNTL---AVRLGPVVARYYHALLIGAAIFCLALFSILHLHSWHGWIFLLAIPLLG............................. 265
6 -5.570IDP06321 ABC transporter permease [Streptococcus pneumoniae TIGR4] NP_345398 [Streptococcus pneumoniae TIGR4]  ali follow..  12  16.NRKLYYPFALAVLLAVTITYLFYSLTFNPKIAEIRGGTTIQATLGFGMFVVTLASAIIVLYANSFVMKNRSKEL-----IYGMLGL--HLISMTFKELVVFGILTVGAGIGIGALFDKL--------------IFAFLLKLMKLKVELVATFQMNVVIAVLVVFGLIFLGLMFLNALRIARMNALQLSREKASGE-------KRGRFLPLQTILGSISLGYYLALTVTDPLTALTTFFLAVLLVIFGTYLLFNAGITVFLQILKKNKKYYYQPNNL--SVSNLIFRMKKNAVGLATIAILSTMVLVTM................................................ 300
7 -4.760IDP92129 ftsJ-like methyltransferase domain-containing protein [Toxoplasma gondii ME49] TGME49_007990 [Toxoplasma gondii ME49]  ali follow..  13  37......................LLQLSQRFRLFEKSCASVVDLCAAP--GGWLQVAAKHCPV--------------------TIVGV--DLVPISP--------IRGVQTFTGDITTPQCAAKLRKLVKFGEVDLVLH--------------DGSPNMGT--------------DWSVDAFSQNVLVLCAAKLACQLLTFV------SKVFRSADYAALLYVLQTLFERVDATKPQASRAVSAEIFVVCR--FRKPPVLDERLFDPKHVFLQGSDDGDAPAAAQK........................................................................ 238
8 -4.670IDP91946 integral membrane protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100004617 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  2...............................................SISILATCLAYLLAYFLNLSS-----AVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGF-----------HIWSLGLYLAFYVPLAYKMGWEIGI---------TPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALL............................................................................................................................................................ 136
9 -4.530IDP90291 high mobility group (HMG) box domain-containing protein [Toxoplasma gondii ME49] TGME49_081900 [Toxoplasma gondii ME49]  ali follow..  21  428....................................DGVYTQKSTLGRKAGLGLFCE-------------RPEGLHKGQIITEFVGWLVDRDLAESYRK--------------------------------------TASHIVAVQKGFLYIDGAKAYGMGGGSFA----AQFYHWFDDELGRTRVFLRAT----------------ADIKNGE--EIFVPY....................................................................................................................................... 557
10 -4.500IDP05347 hypothetical protein CD2364 [Clostridium difficile 630] CD2364 [Peptoclostridium difficile 630]  ali follow..  23  7..........................................................................................................................................................................................IIILFIIILGSIFIIFFNFEDGKLRIGDTSGFVINYMV..................................................................................................................................... 52

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.