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Query: IDP04645 gene: purK; phosphoribosylaminoimidazole carboxylase ATPase subunit [Francisella tularensis subsp. tularensis SCHU S4] FTT0897 [Francisella tularensis subsp. tularensis SCHU S4], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKIGIIGAGQLARMLSLAGTPLGLEFHCLGKNGDCAEEVVKTVTDIELTKVNDVVAWAKQFDVITFENENISHELIKAINHEVSVYPSAKAIAISQDRLLEKSFMQDHGIATAKFVNIDSLAKLQSAVDDHGLPAILKTRRFGYDGKGQFVIRSQEDITKAWDVLKDAPDGLIYEAFVDFDYEVSQICTADLKGNIAFYPLARNTHKQGIIVESEAPFENVVLAEKAQQIAKILVKEFAYVGTLAIEFFVKGDELIVNEIAPRVHNSGHWSIDGAVTSQFENHVRAIAGLILGDTTSRKTVMLNCIGGMPATKDLAALDRVKIHSYNKEPRKGRKVGHLNLNLNDETDEYQLLQVKKLIALSEEILast
1 -128.000IDP04645 gene: purK; phosphoribosylaminoimidazole carboxylase ATPase subunit [Francisella tularensis subsp. tularensis SCHU S4] FTT0897 [Francisella tularensis subsp. tularensis SCHU S4]  ali  100  1MKIGIIGAGQLARMLSLAGTPLGLEFHCLGKNGDCAEEVVKTVTDIELTKVNDVVAWAKQFDVITFENENISHELIKAINHEVSVYPSAKAIAISQDRLLEKSFMQDHGIATAKFVNIDSLAKLQSAVDDHGLPAILKTRRFGYDGKGQFVIRSQEDITKAWDVLKDAPDGLIYEAFVDFDYEVSQICTADLKGNIAFYPLARNTHKQGIIVESEAPFENVVLAEKAQQIAKILVKEFAYVGTLAIEFFVKGDELIVNEIAPRVHNSGHWSIDGAVTSQFENHVRAIAGLILGDTTSRKTVMLNCIGGMPATKDLAALDRVKIHSYNKEPRKGRKVGHLNLNLNDETDEYQLLQVKKLIALSEEI 365
2 -106.000IDP00922 gene: purK; phosphoribosylaminoimidazole carboxylase ATPase subunit STM0533 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  34  2KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPTA-------------------VPVQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLGLATAPWQLLTSTDEWSGIFDRLGELAIIKRRVGGYDGRGQWRLRADETGQLPD----DCYGECIVERGIHFSGEVSLVGARAHDGSTVFYPLTHNLHQDGILRTSVAFPANAEQQEQAESMLSAIMQALNYVGVMAMECFITPEGLLINELAPRVHNSGHWTQNGASISQFELHLRAITGLPLPAPVINAPSVMINLIGSELNYDWLKLPLVHLHWYDKAVRPGRKVGHLNLTDSDTSRLSATLEAL......... 335
3 -105.000IDP04479 gene: purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK [Yersinia pestis CO92] YPO3077 [Yersinia pestis CO92]  ali follow..  35  3.PVCVLGNGQLGRMLRQAGEPLGIAVYPVGLDAEPEA-------------------VPYQHSVITAEIERWPETALTRELATHTAFVNRDIFPRLADRLPQKQLLDSLGLATAPWQLLSSASEWPEVFATLGELAIVKRRVGGYDGRGQWRLRPGEQGTLPPD----AYGECIVEQGINFSGEVSLIGARSHQGESVFYPLTHNLHEDGILRMSVALPPNSKLQQQAEKMLSAIMDKLNYVGVMAMECFIVGDRLLINELAPRVHNSGHWTQNGASISQFELHLRAILDLPLPQPVVNTPSAMVNLIGTPVNIQWLSLPLVHLHWYDKEVREGRKVGHLNLNDPEGTALSASLAAL......... 335
4 -92.900IDP02449 gene: purT; phosphoribosylglycinamide formyltransferase 2 [Yersinia pestis CO92] YPO1775 [Yersinia pestis CO92]  ali follow..  23  14.RVMLLGAGELGKEVAIECQRLGLEVIAVDRYADAPAHVAHRSHVINMLDGAALKQLVAQPHYIVPEIEAIATDMLVELEKGQHVVPCAEATRLTMNREGIRRLAETLQLPTSSYRFADTDSAFFQAVRDIGYPCIVKPVM-SSSGKGQSLIRSEEHLQAAWEYAQAGSGRVIIEGLVHFDFEITLLTIRAVDGIHFCAP-IGHRQEDGDYRESWQPQMSDIALQRAKEISAQVVTALGGFGLFGVELFVCGDDVIFSEVSPRPHDTGMVTLISQNMSEFALHVRAFLGLPIGTIRQYGAAASAVILPELTSQETALIGDTQIRLFGKEIAGKRRLGVALAVADNIETAIEVAKAAGNIEVSGE. 393
5 -88.200IDP04418 gene: purT; phosphoribosylglycinamide formyltransferase 2 [Francisella tularensis subsp. tularensis SCHU S4] FTT1767c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  25  6IKIMLLGSGELGKEFIIAAQRLGIHTIVVDRYKNAPAQVAHESYVIDMLNSDALEQLIKNPTYIVPEIEAINTDSLVKLEANFNIIPCAKAAKLTMDRQGIRALAQQLNLQTSKFAFANSEQEYLDVIQSIGLPFVIKPVM-SSSGKGQSIVKEHNEIKKAWDYARGHAKGVIVEQFIDFDYEITLLTVRHKDGTS-FCDPIGHIQKDGDYRFSWQPHMPDTALAKSQEIAKEITDALGGYGVFGVELFIKGDEVFFNEVSPRPHDTGMVTLISQNINEFELHLRAIVGLPIPDIQTLQPSASAAILLEGGIDKALADANVDIRIFGKEIHGKRRMGVVLAKAQNTHIALETSKQA......... 378
6 -42.600IDP90725 acetyl-CoA carboxylase biotin carboxylase subunit [Vibrio cholerae O1 biovar eltor str. N16961] VC0295 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  17  4.KVVIANRGEIALRILRACKELGIKTVAVHSTADRDLKHVLLADESSYLNIPRIISAAEVTGAYGFLSENADFAEQVERSGFIFVGPRAETIRLMGDKVSAINAMKKAGVPCVPGSD-NDEAKNKAHAKRIGYPVIIKASGGG-GGRGMRVVRNEAELTKSIQMTAFNNDMVYMEKFLENPRHVEVQVIADGQGNAIHLDCSMQRRHQKVVEEAPAPGITEEMRKFIGERCTRACIEIGYRGAGTFEFLYENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSDIKIRGHAVECRINAEDP-ERFLPCPGKIERFHAPGGMGVRMIGKLITYGENRDVAIARMRNA......... 405
7 -41.500IDP02748 gene: accC; acetyl-CoA carboxylase biotin carboxylase subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA4408 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  4.KVLIANRGEIAVRIIRACKEMDIETVAIYSEADKESLHVQIADEASYLNLTNIISVAKLTGCYGFLAENADFAELCRECNLIFIGPSPEAISKMGTKDVARDTMKEAGVPIVPGSQIKNTEEAIELANQIGYPVIIKATAGG-GGKGIRVARHEEELVKGIQITAFGNPGVYLEKYVEDFRHVEIQIMADTHGNAIHLDCTIQRRLQKLLEESPSPALDENVRKQMGEAAVKAAVAVDYTGAGTVEFIYETKSFYFMEMNTRIQVEHPVTEMVTGVDLIKEQILVASGEKLSEVQFNGWAIECRINAENPAKKFMPSPGKVEMYLPPGGFGIRMVAKLIVHGKTREEAIAKMKRA......... 407
8 -40.300IDP90722 gene: accC; biotin carboxylase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1290c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  18  5.SILIANRGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASSYLNIPAIIAAAEIAEAYGFLSENQNFVEICAKHNIKFIGPSVEAMNLMSDKSKAKQVMQRAGVPVIPGSALAGAEAAKKLAKEIGYPVILKAAAGG-GGRGMRVVENEKDLEKAYWSAAFGDGTMYMEKYIQNPRHIEVQVIGDSFGNVIHVDCSMQRRHQKLIEESPAILLDEKTRTRLHETAIKAAKAIGYEGAGTFEFLVDKNLFYFIEMNTRLQVEHCVSEMVSGIDIIEQMIKVAEGYALPSIKLNGHSIECRITAEDS-KTFLPSPGKITKYIPPAGRNVRMIGKLVVWAEDRNKAIAKMKVA......... 405
9 -39.900IDP02328 acetyl-CoA carboxylase biotin carboxylase subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA2548 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  4.KILIANRGEIAVRIMKTCQKLGIRTVAIYSEADENALHVKMANEASYLNLEKIIEIAKKTNAYGLLSENPSFPVRCKEEGIVFIGPSEEIITKMGSKIESRIAMQAADVPVVPGINIETAEEAIEIAKQIGYPLMLKASAGG-GGIGMQLMETEQTLTKAFESNFFGNGEMYLERYIADAHHIEIQLLADTHGNTVYLECSVQRRNQKVIEEAPSPFLDEGTRKAMGEIAVQAAKALGYTNAGTVEFLVDEQKFYFLEMNTRLQVEHPVTEEITGLDLVEQQLLIAYGEKLSDIKRSGHAIEARIYAEDPKTFFPSPGKITDLTLPTNVR-DPMIAKVIAHGETREEAISKLHDA......... 403
10 -29.500IDP00671 gene: carB; carbamoyl phosphate synthase large subunit SACOL1215 [Staphylococcus aureus subsp. aureus COL]  ali follow..  12  9.TILVIGSGPIGTQACLALKEEGYRVILVNSNPATIMTDKEIADKVYIETHDFIARIIEQPDALLPTLIQLHESGVLQDNNVQLLGTELTSIQQAEDREMFRTLMNDLNVPVPESDIVNTVEQAFKFKEQVGYPLIVRPAF-TMGGTGGGICHNDEELHEIVSNGYSPATQCLLEKSIAGFKEIEYEVMRDKNDNAIVVCNMENIHTGDSIVVAPSQTLSDVEYQMLRDVSLKVIRALGIEGGCNVQLALDPHDYYIIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDPITGTSYAAFEPTLDYVISKIPRFPFDKFEKGERELGTQMKATGEVMAIGRTYEESLLKA............ 396
11 -28.300IDP90592 gene: carB; carbamoyl phosphate synthase large subunit [Vibrio cholerae O1 biovar eltor str. N16961] VC2389 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  560.KIMVLGGGYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLTLEDVLAIVRVEKPKGVIVQ-QTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQQAVQRLGLKQPDNATVTAIEQAIEKSREIGFPLVVRPSY-VLGGRAMEIVYDEQDLRRYFNEAVSNESPVLLDRFLDDATEVDVDAICDGERVVIG---QAGVHSGDSACSLPAYTLSQEIQDKMREQVEKLAFELGVRGLMNIQFAVKDNEVYLIEVNPRAARTVPFVSKATGAPLAKIAARVMVGQTLEEIIPPYYSVKEVVLPFNKFPGVDPLLGPEM----------RSTGEVMGVGATFAEAYAKAELGC........ 934
12 -26.600IDP90640 gene: ddl; D-alanyl-alanine synthetase A [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0798c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  1MKFAILFGGN-AVVLKKVINQNLEFIFCTFSTKAYKKEKELFIKQGGFFSKGFLKENKLECECVINLIEDGKIAALFEFYSIKFIGPRLEASVLSFNKELTKLYAKSVGVKTLDYTILRKNQNSK---EKLSFPCIIKPARLGSS--GISIVKDEKDLEYAKDVGFEFDNDLVVEEFKNNIKEYNLAGCMINDEFVFFLDFEQKYLSFSGHNELIEADLSEELKEKLKDSFKKIYNPLFKGALIRCDFFILDNEIYLNEIN---------PNPGSLANYLFKDFNTTLNALADQI...................................................................... 323
13 -26.200IDP90807 gene: carB; carbamoyl phosphate synthase large subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0279 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  9.SILLIGSGPIGTQAAKTLKELGYRVVLINSNPATIMTDPEFADATEPITKESILSIIKKEKI-VALNVAMEVYESGLLGDVKFLGANPEAIKKGEDRQVFKECMKKIGMDLPKSMYAYNYDEALKAVDEIDFPLMIRAS--TLGGAGSGVVYNMDEFKELTNTALSPIHEILIEESLLGWKEYEMEVIRDRADNCIIVCSIENVHTGDSITIAPALTLTDKEYQVMRNASFAILREIGVDGGSNVQFAINPKRMIVIEMNPRVSRSSALASKATGYPIAKVATLLAVGFSLDDITGTPASFEPVIDYIVTKIPRFTFEKFP-------GTAMKSVGEVMAIGRTFKESIQKA............ 394
14 -25.500IDP05293 gene: ddl; D-alanine--D-alanine ligase [Clostridium difficile 630] CD1408 [Peptoclostridium difficile 630]  ali follow..  12  1MKIAVIMGGNSGKEIYNNLDKNKYEVVKVIIDDKK----------------DIFTKIPEDIDFAILALEDGCIQSILETMDIPYSGCGPLCSGMCMDKNITKKMLRDSNLPTAPWVLVKSVDEIYDEIDNIGYPVFIKPNSGG-SSVATFFIHSKDEVEEAVRKGLEVDEFVMIEKYIP--GEYTSFILNGEVFPTISIKSDEAKYSVEKGAKEEVVYLDEELQKRVNEISETCWKIFNCKAYVRVDMIISEGIPYVLELN---------TLPGMTQTSLIPRSAAARGIKYSEL...................................................................... 289
15 -23.900IDP04425 gene: carB; carbamoyl phosphate synthase large subunit [Bacillus anthracis str. `Ames Ancestor`] GBAA4025 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  553.SVVVLGSGYATVHSVWAIKEAGYEAIIINNNPETVSTDFSISDKLEPLTIEDVMHIIDLEKPEGV-QTAINLAAKLEEHGVKILGTSLEDLDRAEDRDKFEAALTKLGIPQPVGKTATTVEQAVAIAEEIGYPVLVRPSY-VLGGRAMEIVYRQEELLHYMKNAVHADHPVLIDRYMV-GKEIEVDAISDGENVFIP---RAGVHSGDSIGVYPPQSLSEKLKEQIIEHTIALGKGLNIVGLLNIQFVVFKDQVYVIEVNPRASRTVPFLSKITGVPMANVATKVILGQDLVEQGTGYHPEEKEVYVKAPVFSFAKLRSVDTTL----GPEMKSTGEVMGKDLTLEKALYKGLVAS........ 928
16 -23.500IDP01207 D-alanine--D-alanine ligase (D-alanylalanine synthetase) (D-Ala-D-Ala ligase) BA_2610 [Bacillus anthracis str. Ames]  ali follow..  13  1MRIGVIMGGMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLALHG---------------EDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNDELDKLGFPLVVKPNSGG-SSVGVKIVYDKDELISMLETVFEWDSEVVIEKYIK--EEITCSIFDGK-----QLPIISIRHAAEFFDIEEVIELPAELKERVNKASLACYKALKCSVYARVDMMVKDGIPYVMEVN---------TLPGMTQASLLPKSADAAGIHYSKL...................................................................... 287
17 -23.200IDP91879 gene: vanG; D-Ala:D-Ser ligase [Enterococcus faecalis] AAQ16273 [Enterococcus faecalis]  ali follow..  13  4KKIAVIFGGN-ASAVFENINTNKFDIIPIGITRSCPVVVSQNRSVKGFLEIASDKYRIIKVDLV----EDGTLQGIFELAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSVTFKRFNAMKEIEANLTYPLFIKPVRAG-SSFGITKVIEKQELDAAIELAFEHDTEVIVEETIN-GFEVGCAVLGIDELIVG-FFDYTEKYTLKSSKIYMPARIDAEAEKRIQEAAVTIYKALGCSGFSRVDMFYTPSGIVFNEVN---------TIPGFTSHSRYPNMMKGIGLSFSQM...................................................................... 339
18 -23.100IDP90274 carbamoyl phosphate synthetase II [Toxoplasma gondii ME49] TGME49_015260 [Toxoplasma gondii ME49]  ali follow..  12  484.KVLLLGSGSIGQQAIKALKEQNIFVVVVNPNIATVQTSQHMADR-TDEFVTKVIEKEMPDGILCTFGGQTALNCAVKLHEQ--LGSPIEAIIATEDRKVFAAKLEEIGEKVAESAAATNTEEAVQAAKAIGYPVLIRAA----GGLGSGFAEDEETVRRICKEAFSHSSQVFVDKSLKGWKEVEYEVVRDCKNNCITVCNMENLDPLGI-SIVVAPSLSNEDYYRLRDTALKVIRHFGIVGECNIQYALDPNKYYIVEVNARLSRSSALASKATGYPLAYIAAKLALGSTLVELSNSVTKETTACFEPSLDYVVTKVPRWDLRKFSCDPLMGSAMGEVMAIGRTFEESLQKALRMVDEKAGGF. 880
19 -22.700IDP00919 gene: ddl; D-alanyl-alanine synthetase A STM0380 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  14  4LRVGIVFGGK-AKNIVDAIDKTRFDVVLLGIDKAAISLAQVPGKHQHQLINAQNGQPLPTVDVI----EDGSLQGMLRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNSFAEVESRLGLPLFVKPANQG-SSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIK-GREIECAVLGNDNPQASFYAYDTKYIDDNGAQVVVPAQIPSEVNDKIRAIAIQAYQTLGCAGMARVDVFLTADNVVINEIN---------TLPGFTNISMYPKLWQASGLGYTDL...................................................................... 342
20 -22.500IDP91787 gene: vanC; D-alanine-D-alanine ligase-related protein [Enterococcus gallinarum] AAA24786 [Enterococcus gallinarum]  ali follow..  15  3.KIAVLFGGN-AASVIQAIDPLKYEVMTIGIAPTMDWYWYQGNLANVRNDTWLEDH-RIVPDVL----EDGCIQGLLELMNLPYVGCHVAASALCMNKWLLHQLADTMGIASAPTLLLSRYETIDRFIQDHGFPIFIKPNEAG-SSKGITKVTDKTALQSALTTAFAYGSTVLIQKAIA-GIEIGCGILGNEQLTIGAFFDFEEKYQLISATITVPAPLPLALESQIKEQAQLLYRNLGLTGLARIDFFVTNQGIYLNEIN---------TMPGFTGHSRYPAMMAEVGLSYEIL...................................................................... 330
21 -22.400IDP00575 gene: ddl; D-alanine--D-alanine ligase YPO0557 [Yersinia pestis CO92]  ali follow..  11  3EKVAVLLGGT-GQAVLAGLKEAGIDAYGVDTKDFPVTQLKEQGFDKVFIALHG---------------EDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQALGLPISPYVALNRQQELVACVAKLGLPLIVKPSHEG-SSVGMSKVDHASELQKALVEAFQHDSDVLIEKWLS--PEFTVAILGDEVLPSIRIQPPDAKYLSDKTQYFCPSGLSDESEQQLAALALQAYHALDCSGWGRVDVMQDRDGFYLLEVN---------TSPGMTSHSLVPMAARQYGLSFSQL...................................................................... 297
22 -22.400IDP06289 gene: ddl; D-alanyl-alanine synthetase A [Streptococcus pneumoniae TIGR4] NP_346110 [Streptococcus pneumoniae TIGR4]  ali follow..  13  3QTIILLYGGR-AESVMRAVDYDRFTVKTFFISQSGQEDRLMTNETIDWDKKVAPSAIYEEGAVV----EDGSVQGFLEVLKMPYVGCNILSSSLAMDKITTKRVLESAGIAQVPYVAIVEGDDIAEVEEKLAYPVFTKPSNMG-SSVGISKSENQEELRQALKLAFRYDSRVLVEQGVN--REIEVGLLGNYDVKSTLFYDYDAKYIDNNITMDIPAKISDDVVAVMRQNAETAFRAIGGLGLSRCDFFYTDKGIFLNELN---------TMPGFTQWSMYPLLWDNMGISYPKL...................................................................... 327
23 -22.300IDP02225 D-alanine--D-alanine ligase [Coxiella burnetii RSA 493] CBU_1338 [Coxiella burnetii RSA 493]  ali follow..  13  5LHISVLCGGQ-AKNIVNTLDAAKYLISVIFIDHVARPITIAFGDAAKPWQSLNGDGRRYSADCV----EDGALQGLLELLNLPYVGANVQSSAVCMEKDLTKTVLRAGGIPVVDWHTLSPRDATEGVYRWGTSELFVKAVSLGSS--ATLPVKTETEFTKAVKEVFRYDDRLMVEPRIR-GREIECAVLGNGAPKASYYSYDAKYLDPNGATTTTSVDLSESVTKQIQQIAIDAFKMVHCSGMARVDFFVTPNNVLVNEIN---------TIPGFTNISMYPKMWEASGLPCPNL...................................................................... 343
24 -22.300IDP91799 gene: vanE; VanE [Enterococcus faecalis] AAL27442 [Enterococcus faecalis]  ali follow..  15  3.TVAIIFGGV-AVAIIKNMESIDYNVMKIGITEEGHWYLFEGTTDKIKKDRWFLDESCEKPDIL----ENGAMQGVFELLDIPYVGCGIGAAAISMNKIMLHQFAEAIGVKSTPSMIIEKGQKVDAFAKIHGFPLYIKPNEAG-SSKGISKVERKSDLYKAIDEASKYDSRILIQKEVK-GVEIGCGILGNEQLVVG-FFDYEEKYNLVTAEILLPAKLSIDKKEDIQMKAKKLYRLLGCKGLARIDFFLTDDGILLNEIN---------TMPGFTEHSRFPMMMNEIGMDYKEI...................................................................... 332
25 -22.300IDP01488 gene: ddl; D-alanyl-alanine synthetase A VCA0572 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  4TTILLLCGGGSSEHEISLVSANYI-QQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSATLNSDKETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTDKAKQAFGHWGSIFVKAARQG-SSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVK-PRELEVSAYEMNGKLYISKPGEVIAPEGTFYSTVLEAELTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGIYLNEVN---------TFPGMTPISMFPKMLEHNGHRFSEF...................................................................... 321
26 -22.200IDP91878 gene: vanB; VanA protein [Enterococcus faecium] pVEF1_014 [Enterococcus faecium]  ali follow..  16  4IKVAILFGGC-AIEIAANINKEKYEPLYIGITKSYSAVLSPDKKMHGLLVKKNHEYEINHVDVA----EDGSIQGLFELSGIPFVGCDIQSSAICMDKSLTYIVAKNAGIATPAFWVINKDDR--PVAATFTYPVFVKPARSG-SSFGVKKVNSADELDYAIESARQYDSKILIEQAVS-GCEVGCAVLGN-SAALVVGEVDQIRLQYGIFRVITVPALSAEERGRIQETAKKIYKALGCRGLARVDMFLQDNGIVLNEVN---------TLPGFTSYSRYPRMMAAAGIALPEL...................................................................... 332
27 -21.600IDP91788 gene: vanD; D-Ala:D-Lac ligase VanD [Enterococcus faecium] ACM47287 [Enterococcus faecium]  ali follow..  14  4IKVAVLFGGC-AMEIAANIDTKKYQPYYIGITKSDPVVFSPDRSTHGLLIQKDTGYEIQPVDVV----EDGSIQGLLELSGIPYVGCDIQSSVICMDKALAYTVVKNAGIAVPGFRILQEGDR--LETEDLVYPVFVKPARSG-SSFGVNKVCKAEELQAAIREARKYDSKILIEEAVT-GSEVGCAILGN-ENDLMAGEVDQIELRHGFFKVIRVPALPDEVRERIRKTAMKIYRILGCRGLARIDLFLREDGIVLNEVN---------TMPGFTSYSRYPRMMTAAGFTLSEI...................................................................... 332
28 -21.500IDP91050 gene: vanB; D-Ala:D-Lac ligase [Enterococcus faecalis] EFE0001 [Enterococcus faecalis]  ali follow..  16  4IKVAIIFGGC-AIEIAANINTEKFDPHYIGITKNGPAIFSPDRKTHGLLVMKEREYETRRIDVA----EDGAIQGLFELSGIPYVGCDIQSSAACMDKSLAYILTKNAGIAVPEFQMIEKGDK--PEARTLTYPVFVKPARSG-SSFGVTKVNSTEELNAAIEAAGQYDGKILIEQAIS-GCEVGCAVMGN-EDDLIVGEVDQIRLSHGIFRMIIVPAIPVEERNRVQETAKKVYRVLGCRGLARVDLFLQEDGIVLNEVN---------TLPGFTSYSRYPRMAAAAGITLPAL...................................................................... 331
29 -19.900IDP02693 gene: ddlB; D-alanine--D-alanine ligase B [Francisella tularensis subsp. tularensis SCHU S4] FTT0185 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  13  4EKIVVLYGGD-GKAVLDSLISQGYDAVGVDASGKELVAKLLE----------------LKPDKCFVALENGRVSALLEMLEIKHTSSSMKSSVITMDKMISKEILMHHRMPTPMAKFLTDKLVAE---DEISFPVAVKPSSGG-SSIATFKVKSIQELKHAYEE-ASKYGEVMIEQWVT--KEITVAIVNDEVYSSVWIEPQNEFYDSGKSIYHSPSGLCEQKELEVRQLAKKAYDLLGCSGHARVDFIYDDRGFYIMEIN---------SSPGMTDNSLSPKSAAAEGVDFDSF...................................................................... 287
30 -18.400IDP02239 gene: purD; phosphoribosylamine--glycine ligase [Bacillus anthracis str. `Ames Ancestor`] GBAA0299 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  16  1MNVLVIGRGGREHALAWKFAQSEKVEKVYVAPGNEGMRDVATPIDIDENDFDALVLFAKEVELTFVGPEIPLMNGIVDRFKEEGLGPNKAAAVIEGSKAFTKELMKKYNIPTAAYETFTDYEEAVQYIEKVGAPIVIKA-DGLAAGKGVTVAMTLEEALQAAKEMGEASKKVVIEEFLD--QEFSLMAFVNGTTVHPMVIAQDHKRTGGMGAYSPVPQISESAVQEAIEAKAMIQENRSFTGILYAGLILTNDGPKVIEFNARFGDPETEVVLPRLENDLVDVCNAVLDESELTLQWSDEAVIGVVLAAKGYKGLDALQDVIVFHAGTAMKRGDRVLFVACKANSLQEAKDKV............ 393
31 -17.500IDP04230 gene: purD; phosphoribosylamine--glycine ligase [Clostridium perfringens ATCC 13124] CPF_0678 [Clostridium perfringens ATCC 13124]  ali follow..  15  1MKILLVGSGGREHALAWKLGKSSKVEKIYVAPGNGGTANENKCENIELTKICDLLKFAKNIDLTIVGPEEPLINGIVDAFKGEGLGPDKAGAMLEGSKSFSKDFMKKYGVKTADYEVFYDYEEAKIYLENCKYPRVIKA-DGLAAGKGVVICENKNQAIETLDLFNGAGKKIVVEEFLQ--IEASILSVTDGKVILPFLSAKDHKQTGGMGVISPNKYVTEEVLADFYELIGIREEGFDFKGVIFFGIMITEEGAKLLEYNVRMGDPETQSVLSLMESDLVDIILNALDEKLNETTIKGYCVNVVLSSKGYPEAYDESLKGEYFIAGAKKEGDTRVLSVVGKGKTLEEAKENA............ 394
32 -16.100IDP04490 gene: purD; phosphoribosylamine--glycine ligase [Yersinia pestis CO92] YPO3729 [Yersinia pestis CO92]  ali follow..  19  1MNILIIGNGEHALGWKAAQSPLADKIYVAPGNAGTALEPTLENVDIAATDIAGLLAFAQSIGLTIVGPEAPLVIGVVDAFRAAGLGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKA-DGLAAGKGVIVAMTQEEAETAVNDMGDAGHRIVVEEFLD--EEASFIVMVDGENVLPMATSQDHKRTGGMGAYSPAPVVTDDVHQRVMDVRGMAAEGNIYTGFLYAGLMISADG-KVIEFNCRFGDPETQPIMLRMRSDLVELCLAGTQGKLNEKTSDQGDVIHGLPQQEVKDGKVFHAGTKLNGNHEVVTNGGRVLCVTALGETVAQAQQYA............ 401
33 -16.000IDP90620 phosphoribosylamine--glycine ligase [Vibrio cholerae O1 biovar eltor str. N16961] VC0275 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  1MQVLIIGSGEHALAWKVAQNPQVDTIYVAPGNAGTALEHKVQNVNIGITDIPALVAFAQDIELTIVGPEAPLVIGVVDAFRAAGLGPTQGAAQLEGSKAFTKDFLARHNIPTAAYANFTEIEPALAYVREKGAPIVVKA-DGLAAGKGVIVAMTLQEAEDAIQDMGSAGSRVVVEEFLD--EEASFIVMVDGENVLPMATSQDHKRTGGMGAYSPAPVVTQDVHDRVMRVRGMAAEGNTYTGFLYAGLMIDSTG--VIEYNCRFGDPETQPIMMRLQSDLVELCQAAIAGKLDQVESKRASIGVVLAAGGYPGDYQESAGQKVFHAGTETQGDQRVLCATALGNTVLEAQQRA............ 400
34 -16.000IDP90869 gene: purD; phosphoribosylamine--glycine ligase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1250 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  19  1MKIMILGSGAREYSIALALRRVDKNLEFYFAPGNGATESLGTNL--NLKDPVVLATYAKEFDLCIVGSESFLAEGVVDIFKQQGLGPSKAAAMLETSKSFMKSFLKKYRIKTAKFLNTNDIEKAKNFIYSLTPPIVVKA-DGLCAGKGVIIAKTHEEAIEETAKMGDAGKLVVIEEFLD--YELSIFAVCDGNDFVLLPAAQDHKKTGGMGAYAPSSLANESLLRKVQKLAGMKKEGAEFCGVLFIGAMIVGNKPYVLEFNVRFGDPECEVLMPLIEDPLELILAATQRLRHSKIKIKKEFAVGVVCASENYPYNNIPENSHISYAGVSLEDGKRVLVCVGTGKSIEEAQKNA............ 392
35 -14.900IDP04357 gene: purCD; fusion protein PurC/PurD [Francisella tularensis subsp. tularensis SCHU S4] FTT0894 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  328VNILLVGSGSREHAIAEAVKRSSIANKLFCISTAINDKITQGYQIADICNCDEVLEYAKSIDIAIIGPEAPLEAGLADALKTAAIGPTKKLAQLETSKGFTRDLIRDYDIGANPFRKFNSMDGVEETLKKYQNQFVIKA-DGLCGGKGVLVWGDHLHAIRHCQSLVDAGKEFVIEEKLV--QEFSLISFADGK-NFIHMPAVQDHKRGGMGTYSDANHSLPFLSAADIERAKQINEGEPYQGILYGGFMATKDDTKVIEYNARFGDPEAMNLLTLLETDFVEIAQAITQGKLDTVKAKQASVCKYLVPLGYPNQSVKPDNVELFLGAVDYKDGKRAIAVLGLGDTIAEAEQKAENA......... 731
36 -10.100IDP02255 gene: cphA; cyanophycin synthetase [Francisella tularensis subsp. tularensis SCHU S4] FTT1130c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  172........GPSTASLVEAAKKRDIPYIRLND--------------------QSLVQFGYG-------------KYQQRIRATITGKTTSIAVDLSCDKEQTNTILSSLGLPVPKQRMVTTEEGAVRAAKILGFPLVVKPLDGNHGRGISINLKTIEEIKEAFVEANKVSRYVLLEQYVI--FDHRMLVVDGKDGKHTIAELVEIVNQDTILKDGEVFYLRSTANLSTGGTAIDVTDIVHERAIKAIGLDVGGVDFLIDDISQSYHDIGGAICECNAAPGFRMHVAPSEGKPRDVAGANARIPIAAITGTNGKTTTSRMVAHMWK------NAGKVVGLTTTDG...................... 530
37 -9.650IDP04310 D-alanine--D-alanine ligase, C-terminus [Bacillus anthracis str. Sterne] BAS0231 [Bacillus anthracis str. Sterne]  ali follow..  14  1..........................................................................................................................................................................................................................MTEEESNVIKRDAIVAFQSLDGAGLTRADFFLTKDGVYINEVN---------TMPGFTPFSMFPLLWQHTGLPYPEL...................................................................... 69

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Nika K, Tautz L, Saito K, Cerignoli F, Friedberg I, Godzik A, Mustelin T. Identification and characterization of DUSP27, a novel dual-specific protein phosphatase. FEBS Lett. 2007 May 29;581(13):2527-33. Epub 2007 Apr 30.