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Query: IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKLCTVILFLTLLLNGFVPNAHAKTESPSADNNLQVAPPAAIKDLFPDPAMANEVLKSLNLKKLNKKSTSDTVTQTELNSLTGSFQAINKGIKSIEGVEYLQNITELDVEKNQITDIAPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTANVEDISPVKNLVNLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLTNLNTLWLYNAQIRNIDFTANLPKLKSVYLYNNQISNISEVSNWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIVTPNNISDNGTYNSPTLSWNLNETKDNLSYDFTTKITILNINATYSGTVIQPLTKDSTRPIITADGKVSYPEGTTKTTTEFLTDIHATTDDGSPIEVDLNALDFGTAGSYTVTLTAVDTAGNEATPVDVTIIITSVDTSKPVITADEKVSYPEGTTKTAAEFLTDIHATTDDGSPIEVDLNAVDFGTAGSYTVTLNAVDTAGNEATPIQVTIIITNSKKIDPIIPVEPGGNDVKPEKPNEIIILPKDSEIPLSIIPKDNIEKTNSINVIKMIETNEIKNKMLPKTGDKLPLTVFLGMLITLAGISYLRKLast
1 -87.900IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali  100  1MKKLCTVILFLTLLLNGFVPNAHAKTESPSADNNLQVAPPAAIKDLFPDPAMANEVLKSLNLKKLNKKSTSDTVTQTELNSLTGSFQAINKGIKSIEGVEYLQNITELDVEKNQITDIAPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTANVEDISPVKNLVNLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLTNLNTLWLYNAQIRNIDFTANLPKLKSVYLYNNQISNISEVSNWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIVTPNNISDNGTYNSPTLSWNLNETKDNLSYDFTTKITILNINATYSGTVIQPLTKDSTRPIITADGKVSYPEGTTKTTTEFLTDIHATTDDGSPIEVDLNALDFGTAGSYTVTLTAVDTAGNEATPVDVTIIITSVDTSKPVITADEKVSYPEGTTKTAAEFLTDIHATTDDGSPIEVDLNAVDFGTAGSYTVTLNAVDTAGNEATPIQVTIIITNSKKIDPIIPVEPGGNDVKPEKPNEIIILPKDSEIPLSIIPKDNIEKTNSINVIKMIETNEIKNKMLPKTGDKLPLTVFLGMLITLAGISYLRK 646
2 -59.800IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  20  71...SQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNL-----TKLVDILMNNNQIADITPLANLTNLTG-LTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSS--LANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTATSKMPAKNITLYAQYSANSYTATFDVDDFATDKMPANDITLYAQ---TKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNLYLLLGLLAVGTAMALTKK 795
3 -58.400IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  16  220..KGLEYMENLERITIQGSDVRNIAPISQLKRLKVVDLSFNKIENVEPLVNL-----EKLDILELQNNRIADVTPLSQLKKVRT-INLSGNKISDIKPLYNVSSLRKLYVSNNKITDFTGIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKNDIKDITSLSKLTGLQSLNLEENYVSDVSSLSNLINLYELKLATNEIRDIRPIQELGKRIKIDAQRQKVFLDAYMNEEVKIPVYDVNGTALQNIEWLLTVKALKITDGKKEGITDFSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKP--LHSLEDLEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINNLDEISKVSKLNKLEMMSNKVRDISP--LASLKNLQWLNLSDNKIQDISTLSSMLDLLSLKLAGNEIRDVRPVIQLAQWITVDIKNQKIVLEDGQMNQEIQIPIYDLEGEIFED.................................................................................................................................................... 787
4 -57.200IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  18  272....GAVLPELETFYLQENDLTNLTSLAKLPKLKNLYIKGNALETLNGATKLQLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAP--IGDLPNLETLIVSDNNSRSLGTMDGVPKLRILDLQNNYLNYTGTESLSDLTNLTELNLRNNVIDDISGLSTLSRLIYLNLDSNKIEDI--SALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPVANMVNRGAIVTASNQTYTLPTVL...................................................................................................................................................................... 792
5 -54.700IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  23  2....KKTIKITTSLLLSFACVFSIGDFTKPHTVEAEIVNPKPVNEIFTDPKL-----AQVVADWLKLPAATSSVTQTQLNTIKA-LHFDSKGVQSLEGVEYLKNLTQVFGYGNQVSDLGPLSNLTKLEVIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPIKNLTNMLELNVSANPISDINAVKNMTQLEFLTLRDCEVSDLSPVENLSNMLMFWAGRNNISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTLETLTLSFNQIIDISPLKNLTNLTRLELENQTRALDAVEIDNPLILPAPVIDENGSRVQPSKVSHAGVYANGEITWEGLQSNYILNYKITQPLLEKPVDPVTPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVNPVDPVDPVDPVDPVDPVNPVDPVNPVNPDPVNPMKPVEPIIPVTLENQFTLVNQTISVNEEIA............................................................................................................................................................... 499
6 -53.900IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  21  2...................................................................................KEKHNPRRKYCLISGLAIIFSLWIIIGNGTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSF--IFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDVDGTVIKT--KVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVFKAETTEKA............................................................................................................................................................................... 396
7 -53.100IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  19  3...........................KRWNSVFKLVLMVTAILGLSLYVT-TSQGVEVRAESITQPTAINVIFPDPALANAIK-IAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQS---------------------------VTFKNTTVPFSGTVTQPLTEAYTAVFDVDGK--QTSVTVGANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINSYTAT-----------------FDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQF-------------------------------TKNDNPNPDDPTTNTPTGNGDGTSNPSNSGGNTTLPTAGDENTMPIFIGVFLLGTATLILRK 543
8 -52.700IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  26  1MKK----MGVKIGLCILLIMPFTISFSANVSAEENISIKAAQDVVNIPDPAL-----KSYLNGLLGQPSTSDI-TEAQMDTITD-VTISNASLTDLTGLDYAHNLTILHLTNTGVTDYSLVANIPSLTNLNISGSNLTTIPDLNGLTNVTNLNLSSGKLDALTKFNKLPNLTFLNLDNNSITDFMPLKSLPNLASLFIQFCGVNDFRGIDSFPKLTNLAAFGQNVGSAILINSTIKSSALNYNEANQTIFVPFTLMTERSMNFDGYLFTTNTASSSTYFTLNGVQISGSRLSIDDTGVTVSGITKDFFDSI-------------TKMEYNAFYDNPAGSYNSPPNFNSYSVSSGTYDHYFDIDHSL-------------------------------TITNDSAISYGEQTTVTEEQFLKDVHAETDDGTPVTSDFNIVDFSKPGVYTVTLNAENAAGLKATPTQVTVTILA----KPVITADKSISYTKDTTKTEQQFLQDIAAKTSDGSKVTSDFDVVDLAKVGTYKVTLNAVSADGLNADPVIILVNVV------------AGNEPPTPPGPGPDPTPDPTPNPNNPNINPNPDNGQSAKSEIASNPSNSEVNIALPNTGDASQTTVLIGIILAGVAILFFRK 585
9 -52.200IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  26  3VKSNIVKIGVCFAVLAVPVSQTTLPVFAAEQPGLKASQDNVNI----PDSTFKAYLNGLLGQASTAN------ITEAQMDSLTY-ITLANINVTDLTGIEYAHNIKDLTINNIHATNYNQISGLSNLERLRIMGADVTSIPNLSGLTNLTLLDLSHSAHDDLTKINTLPKVTSIDLSYNAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKS---TASSDTYFTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNL------------------------EKMEYNARIDLSYQSYNTPEQFQNGG------------SYTISMPIYDHYFTVDHSLNITADSEKTYIENQLVTEATFLSDIHAKTDDGSTVTSDFAKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTIKA----KTTITADEKITYKVDTSKTEAAFLADIKATTNDGTAITSDFTVVDLSKPGKYVVTLNAEN-DLQKALPVQVMVIVEKETPIPDPTPTPTPDPTPTPDPSPT----PNPVINPNVNKPEVPSYKIPSLTVNEKKAKAEPSKEALPKTGDSLPVGATVGFLLIGLSWFVSRK 597
10 -52.000IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  21  1MRKIPVVVSLALCFSLVSPSLTEPTTIDQPSRMDNSQTAPQKMTASSNSTEEENTPKNNLKSTSENSKTYAELFPDVNLAKIIAKNISGTEDINAEVSEAELQTITNLVATNQNITSLTGIEHLTALENINVNNNELTTIDSLFNIPTLKSISANNNKITGFSLVKTLPELHTLEVLGNAITELD-IENQPNLVTLSADELELKKLT-LKNLSQLNGLGRIASSISESVTLMNLPEIISVDISGNYLDSDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKIDRLSKLVDVPKLATLNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNNGTYSSIAWASGELSGLSKVSYTFDEVINSPAIAGKYTGTVNQPIEVKAVPVI-VADKSVSYAPVNAKDEATFLQDIRASASENAQITSDYSEVDSSKLGTYEATIIAKSKSGASSDPIKLSVKIVD-TEKPIIQINNPEIIIEKGSELTEGQIIDQVGITATDDLNIHMDLSKVDTSKPGSYEVTIYTEDSSGNRSETVTITVKVPEARIGKITIQYMDSENNEFPVYSENNVTPELPSNNNNSVNGSRQTPSKSVKKQSKAYSKINQMPMNLPETGDSTNLLIFMGVLLLAGLTLSKAK 828
11 -51.200IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  19  2..KRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVL-----TDNVKTLLGKADVTDEVTQTDLDSVTH-LSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPYTSPNLTWDLNSFINSVSYTFN--QSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGVNELIN--EPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKNEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFVGA.................................................................................................................................................................... 482
12 -51.100IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  24  1.............MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPADLAEGIRAELQKSSVTDVVTKEELESISQ-LSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISV--LKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPLA--NLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLI--APETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVET................................................................................................................................................................... 474
13 -50.700IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  21  1MYKLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDPVLNSGLKNIIGNPFL-----DEITEANMATITVADLSNMSGAPGYPVT-----GLIKDLTGLDKAVNMTKLYFSNSQIKNLDKIKNLPNLKKIVAVTTGLNNISALGEMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWSEFKNFTKLKSLVKLDLTWNNITDLSPLTENDHITNLNLNYNQFTNVAPIATMKNLKVLYLNNNNLTSIDALNTLRGLTIAYADNNNITDLSNLKNFFEAMVAQGDYEGLQINNQTITLPTINIKKGATANSTN........................................................................................................................................................................................................................................................................................................................................... 316
14 -50.500IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  19  1...................................MFLNTNEILDYSALKYM-----PNLKSLTVANAKIKDPSFFANLKQLNH-LALRGNEFSDVTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITNVAPLSALKNVTYLTLAGNQIEDIKPLYSL-PLTDLVLTRNKVKDLSGIEQMKQLEELWIGKNEIKDVTPLSKMTQLKQLHLPNNELKDITPLSSLVNLQKLDLEANYISDLTPASNLKKLVFLSFVANEIRDVRPVIELSKTAYINVQNQKVFLEET--EVNKEVKVPIYEKDGKISTKIRLKGEGGTYSNDAVKWSTPGEKVYEFGVKDPFADTGIFFTGSVIQNVVESKADNTSKEDNTSKEDAK--VEVVEFKDVPKGHWSEEAIHYLAKENIFKGYGN........................................................................................................................................................................................................... 397
15 -50.400IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  22  1MKKALKLF------------LATICMFIMIYPSTAAHAEETNIVNI-PDANLKTYLNGLLKQASDAP------ITKTQMNTIQT-VTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVKLFVDLNGLVNLQSLSINGSEVTHFKTFNKLPKLTYLYAQNSKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFG-----------------QNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVSGVTK------EEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISH---------------TLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHE----KPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKALPIAGVMLSLAALLIFRK 602
16 -46.400IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  23  2............................MSIKSNIMKIGVCSVMVLVPLSQTSLPSFAAEE-IALKESQDVVNIPDPQLKKELN-LYLNQAENADITE-AQMATFRNITLNSG-IKDLTGIEYLKNITTLSIN-NINASYEPIQTLSSLEKLVINGENVNAIPDLSVLSNLTFLDLSRTNIDDFSKISNIPNLNKLDISNNKITKISELNNLPSLQELRVSDCQITNFKGIEKFPNLTAFYGDGQLFGDSFETDGFKNIKSSELTFDANASIVTVNTILNYDGLSLPYNTNPDYTSIALGDQSYVVTNDKISINQQGIT-LSDFTQADFDELEAFEVYLGFDSGNISKPANLANGTYSLKQIGSYRAFSVDHSVNIT-----------------------AQDNISYIQNDTVTPEKFLTDIKADANGGTITSDLTDKVDFTKPGNYTVTLNAQNTKGLKGEPIQVTVTIIE----KTVITADPEVTYDLNEAITEEEFLAEIKATTNDDTMITSDFSAVDFTKAGEYIVTLNAEN---DTQKAAPLTVKIRVNPKLPDPVVPIPYPDPTPDPTPD-----PTVPVPTPEDSTSDDGGVQHSNSRNPRISISDSSLEKLPKTGDSLPEGVLLGFLTLALGIVIRKK 593
17 -46.300IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  22  1MKFNWKVVLLFVLILAFIVPVYSKAVETGKEVPKSPELLDDKSSTLKNVNTPKN--LKASPLTIPANSTIADLFPDEGMAKT----------IANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLTSV-ATIGSIEGIQYLPNLYDVRLQDKQCKDLSPFNGYSQLYRLNINNGNISDISPLTELSTLNDIDLGGNNISDLSLFPKLPNLEEISLERNNISDVSPLAKFTKIKIFNLDENHITDLSSLTKMPNLQRLYVRYQTLDMEPVVTSSKYEFSIQPSIFGTTKPVKITATKPKATIDPITSKITY------------------SAEEMAKKPFYYTPLFPGVTYSWDENFPLNGSNSL-----------VDFRGTITQPLTYIEPPQVVSYNSGLTYEIGTSLTEQQFLNDVNLITDQPTTITSDFKLKNLNTVGIYWVAVKASNIEGNAEANIMVTIKYK-----PPVITADAEYTYLVGDKVNATQFRADVNATLTGEGTLRDDFYKVRLNTAGDYVVTLTSPKSGYYEQDAIPVTVIVHVKELLELQIP.................................................................................... 533
18 -40.600IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  18  16....MVSNPLLTFAATNDVIDNTTE-ITTDKETSSTQPTIKNTLKASFNDWFPDDNFASEVAAAFEMQATDTI-SEEQLATLTS-LDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD-LSQNTNLTYLACDSNKLTNLD-VTPLTKLTYLNCDTNKLTKLD-VSQNPLLTYLNCARNTLTEID-VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELD-VSQNKLLNRLNCDTNNITKLD-LNQNIQLTFLDCSSNKLTEID-VTPLTQLTYFDCSVNPLTELD-VSTLSKLTTLHCIQTDLLEID---LTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELD........................................................................................................................................................................................................................................................................................... 364
19 -37.900IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  21  1.......................................................................................MKQRKTSVLHVLLVVTAILGISLWVN------ASHGMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPP........................................................................................................................................................................................................................................................................................................................................ 225
20 -37.100CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  25 1000.....KNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNL-----TNLNRLELSSNTISDISALSGLTSLQQL--SFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAIFNVKFHVDGKETT----KEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTANDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTATSKMPAKNITLYAQYSANSYTATFDV-DFATDKMPANDITLYAQFTKN--PVAPPTTGGNTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSNALYLLLGLLAVGTAMALTKK 1678
21 -34.600IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  19  18.........SSLPIPMVKAESTTANEMKTENQLLKTDLKETPKEKT--NDYFPDDNLAKEVAETMNKNADESV-TVEELAKVTK-LDARSQGIEDSTGIEYLTGLEVLNLEDNQLKSID-VSKNLNLKELTCSNNPLANLD-VSKNLALEELTCENNELTQLD-VSQNTALEYLYCPRNQLTKLD-VSKNSALRYLACDVNQLTNLD-VSKNPALTNLGCTKNQLTDLD-VSQNPNLGTLVCSDNQLTNLD-VSQNQALENLACDNNELKNID-INQALSLKELSCENNQLTNLD-TTQNLALEILYCDDNQLTDLDVRKNVNLLILF---------NQLTNLAVGETIAKVRCNNNQLKDVS........................................................................................................................................................................................................................................................................................... 369
22 -31.700IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  15  2...........................................................................KKILTGLSTTLLLTVLLLTITGGDLKAKAASDLYPLPAPIIDVFPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETETITN-RAMFNNVNIVSVMEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTPDYQNYPEMVTITMSGSNLIGIPDFTGMPDLSQLYMADMMITSDPDFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTTNFTNLSNLNNLNLDYNHLNELPSNVLNSIFIENQSGTVPDQIIKQGELAEINMLVNPTVLGSYSADIP-------VEVVTTTNADTESITLDTSELSPGVYNFNVQFNDAYPI-TQEGCVYDWVLTVN............................................................................................................................................................................................................................... 367
23 -31.200IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  14  15....IQQHPEKNQLNWMLELNKWKEERILTGEIHRPECRNEAAK------RINCAFLSKQNDIDLSGLNLSTQPP--GLQNFTS-INLDNNQLTHFD-ATNYDRLVKLSLNSNTLESINHQGRNVSITHISMNNNCLRNID-IDRLSSITYFSAAHNKLEFVQ-LESCEWLQYLNLSHNQLTDIV-TGNKEELLLLDLSHNKLASLH-NALFPNLNTLLINNNLLSEIKMYSNFCKVQTLNAANNQLEKINLLTYLSSIKSLRLDNNKITRIENTSDIRSLFPIIKKSESLNFLN-ISGENNCPTIQLMLFNLFSPALKLNTGLAILSPGAFEDHSDG---DVDNELFHYTINKAYTPYNIHT-------YKTEEVVNQRNIKIKNMTLDEINNTYCNNDYYNEAIREEPIDFLDRSFSSSSWPFYH........................................................................................................................................................................................................................... 419
24 -30.400IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  16  34.....................................................................................LYPLPAPIIDVFPDDGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETSTITN-AMFNNVTDVSIMEFGAKEFPDITTIPHLKTLFFADPPGRLTRNLPNYQNYPEMDTITMSGNNLIGIPDFTGMPALKQLYMSEMLITSDPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNLPKLTDLNLRHNNLTGTVNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGDTCTIDLPIYFQMEETNMEVTGEYIGISVIQLPTTVNEEGNTITVDTSALSPGEYKLDVSYNHNYATGGVCSYDWNVTIN................................................................................................................................................................................................................................. 388
25 -30.400IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  17  7........................GVGAAVRARLALALALASVLSGPPAVACPTKCTCSAASVDCHGLGLRAVPR--GIPRNAERLDLDRNNITRITKFAGLKNLRVLHLEDNQVSVIERFQDLKQLERLRLNKNKLQVLPEFQSTPKLTRLDLSENQIQGIPRFRGITDVKNLQLDNNHISCIEAFRALRDLEILTLNNNNISRILSFNHMPKIRTLRLHSNHLYHLAWLSDWLRQRIVDCRGKGLMEIP-----EGIVEIRLEQNSIKAIGAFTQYKKLKRIDISKNQISDIAPFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN......................................................................................................................................................................................................................................................................... 437
26 -28.200IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  13  4.................................................................................................APTIKAQADTVPLPAPIIEAFEAIAEAIAGELDKDSVNDTITQADLDTAIPLPSLGLTGEDLSVL-NNEVFTNAIELAIWSNNIGELPDSEALPALENIEANGANITVF-PDANYPNLTNVDLSQNNFGFNPKFVGMEGLVSINMENAGLSGYIAWMNMPNLDSLILNENHLISIPEIFLSQQLGTHSFANQTATYPTTIKQGENLKVFVPFIYQALD........................................................................................................................................................................................................................................................................................................................................... 230
27 -27.700IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  12  2.....................................................................................................KKKFVYLLLLVLFMTVLPQMLEAQAASTSWIEQE----LDGNEPFIAETEKILSKNRQD--ITLADLETIQKIHV--FGADSINKISDYKNLTALEANYGTITEVPEVGSLKELVTLNVDENNLQEFMVIFQLPKLEVLYISRGNITEIPTITTLSHLKVLDVSNQKLVTIDSILTTNWKAMHDGKLGMSNQIASDIPANYLDNFNSGGNMLEFYDNPTIDYLQKQDQLTYTGGTIEVPTDFKQLTPDKTNLGLKSNIPLFSQHEFMYYDDGTSANILTNGVATDVGDGYITIKSTLSTNSNPFAKV-RVPIKVTAPLKGADVTVQYLDSNGDTLATPDINAQGTFTEEPQTVIYVYTKNSVAAAPVTVKYLNEEGKILTASDNLTGNVDDTLDESKLPTNASGVFKTNAQTVTYVYKTIPASIKAHDSTMNVGDTWSAKDNVYPVTYSFAGDSVTIKVTVKATVVPAPPITPIKPVVPAPANPNTPSTQQTPTKQSGTLKIKATHQEQPIVAGNLKLPTTGDNLWDSVLFGFITVCLSFVLFFR 619
28 -26.200IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  10  12QSVQLNKITSNTESTIKQHELVSDAIINELSSELVSCLGNDKFTPVSEDSNL----LNMLSEFKLLREQCFRWGNTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELDKLTKITDARLCKGFSDWASSVKEGASNLHSNELNLSSLSLGSVPPL--PEWIEMLSLVYNELDSIQ----PESCKELELDFNNLTEFPQV--PDGITLISVNNNLISYIDSF--PPKAKKIFICHNKLSEIPAL--PDTAKVFDCSENNIKEIRWF--PKNLKEAYIEYNKIEVIPAI--PGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIK........................................................................................................................................................................................................................................................................................... 376
29 -25.700IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  15  1............................................................................................MKKAFLCLSAIVLSLNFVWINPITGSASETTKETNQQVNLKNNVTDIVTSLGGQTWLNEVNRQLAPKT--LTFEDLAKITTISLNNRSLTG-PEIKNLVSLQRLYLFSNKLSG-AELGELTKLTELRLDYNELSGKIP-DGLGNISEIALQNNRLVGQIPLSNRTGKNEVNVSGNQVTILKNSPTFINLQVVYMFNSELFDGHDVTITDTNDGRVLYDGTLTSDISIPLTNFKSGVHVINVMLDNAPLPVPAHDLTVNYVDEAGAEIHEPQTVSGNVGDDYDVTTPEFELAID-TEQMPTNGLGTLSSEAQTVTYVYKKVNGAPVTVKYEDQNGVEITTSDVLTGKLD-ATYQSKAKEIAGFTLDNSKLPANASGIFETNPQTVTYVYQAVPATIKAHDSTIYVEDKWSAEDNFDSAVNSVGAAVSFDDLEVEGTVDTTKAGVYPVTYSFAGESVTINVTVKAKDLPAPPVTP--TKPVVPIQPTNPDQPDIQAAPGEHQASTDKSEALKVTVAQKEQPTVAGNLKLPTTGDNLWDSVLYSAVCVAFSLFFWRK 633
30 -25.700IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  9  12QSVQLNKITSNTESTIKQHELVSDAIINELSSELVSCLGNDKFTPVSEDCNL----LNMLSEFKLLREQCFRWGNYLLFENYESYDKTGSITIEKNQGEGTLPIRHKLEFISTNIAELLDLTKITDARLCKGFSDWASSVKEGGS-LHSNELDLSYLFLGSVPPL--PDWIEMLSLVYNELDSIQ----PESCKELELDFNNLTEFPQV--PDGITLISVNNNLISHIDSF--PPKAKKIFISHNKLSETPAI--PDTAKVFDCGYNKIQEIRYF--PKNLKEARIGYNNIEVVPAI--PGNLKILFMECNPIKEAFLMPWTLTGICYEISQRKYIVTNPADYDKYSDMVKKHVIDGEELIIK........................................................................................................................................................................................................................................................................................... 376
31 -20.500IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  20  755...............................................................................................ARKAARGLNVGHLKLTFCSVGPTE-LQHLRRPVALQLDYNSVGDIG-LPCLGVCKALYLRDNNISDIECALHCEQLQKLALFNNKLTDAKLLACRQNFLALRLGNNYITAAEGLRGNTSLQFLGFWGNRVGDAEALGDHQSLRWLSLVGNNIGSALMLAKNVMLEELCLEENHLQDAEGLKKNSSLKILKLSNNCITYLQALERNDTILEVWLRGNTFSLEEVDKLG.................................................................................................................................................................................................................................................................................................................................... 1032
32 -18.200IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali follow..  15  160.........................................................TVLESVRIERSNLSRVTSFALA-IIRDNNYPTAPSLLTTEGMKNCSNLMEVDLSGLDTSAVTTMWDMRALEELDVSHFDTSSVTNMSYMRNLEVLDVSNLDTSSVTNMYAMTSLEELDVSHFDTSSVTDMYRVEKLKKLDVSNFDTSSATAMVQMSALEKLDVSNFNTSLVTDMRAMTSLEALDVSNFDTSSVTNMAAMEKVEKLDLSTFDTSSVTNMGTMTALKSLYLDNTHAASSTDMTGTTSLSYLFVSHN............................................................................................................................................................................................................................................................................................................................................... 456
33 -16.900IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  18  2..................................................................................................................LKKIIALIALVVIINTVSFTSVSASTPTWLEQT----MNNNEPFIKEIE--------TETGKTRANITQTD----LEAITALRV--TGASDIANIDMLTHLTLLKAVQGTISSVNSVGNLKELKILNLNTNHLSNFPTVYQLPKLEELQLNDGTIEEIPA-NMASHLKFLTVNNNRLVKVPT-SSTGELDLFTTGNQIVTDIPANYVSNFN................................................................................................................................................................................................................................................................................................................................. 208
34 -14.100IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  4.........................................................TSQLRPTGTF--------CSYSAETSADIKSEITPIQ----IEEARASGRLYIKDCDIEYLPQL--PNEITSVTIENNNLTTLTGL--PVNTQNLSVINCEKLQITDMP--STVKNLHIELTDSPFIHFISE--GIECLTVCHCYISGVP-----ESVRYLEIKGSATDSIKNV---NGLSSLSINSYNPENQARIDNSPSLKTLSLTGSNIILPEKL--PESVTSVTIHAEKTTWNIGVEGMPDGLDLDLQN................................................................................................................................................................................................................................................................................................................................................ 232
35 -10.300IDP91710 gene: NXF1; nuclear RNA export factor 1 isoform 1 [Homo sapiens] NP_006353 [Homo sapiens]  ali follow..  13  163.....................................................................VEDASTASALKAVNYKILDRENRISIIINSSAPPHTILNELKPEQVEQLKLI-----MSKRYDGSQQALDLKGLRSDPDLVAIDVVLNRRSCMAATLRIPELLSLNLSNNRLYRLDDMSSIPNLKILNLSGNELKSERELDKIKKLEELWLDGNSLCDRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSL--VLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLL............................................................................................................................................................................................................................................................................................................... 455
36 -9.030CPX_91710_91752 Complex of NXF1_HUMAN with TIP_SHV2C [Undefined organism]  ali follow..  14  163.....................................................................VEDASTASALKAVNYKILDRENRISIIINSSAPPHTILNELKPEQVEQLKLI-----MSKRYDGSQQALDLKGLRSDPDLVAIDVVLNRRSCMAATLRIPELLSLNLSNNRLYRLDDMSSIPNLKILNLSGNELKSERELDKIKKLEELWLDGNSLCDRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSL--VLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFI............................................................................................................................................................................................................................................................................................................................................... 423
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.