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Query: IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKILTGLSTTLLLTVLLLTITGGDLKAKAASDLYPLPAPIIDVFPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETETITNDSMQLLERAMFNNVNIVSVMEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTRNLSLPDYQNYPEMVTITMSGSNLIGAIPDFTGMPDLSQLYMADMMITSDDVPDFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTMTNFTNLSNLNNLNLDYNHLNELPSNVLNSIFIENQSGTVPDQIIKQGETCTIQLPIYFQLAEINMLVNPTVLGSYSADIPVEVVTTTNADTESITLDTSELSPGVYNFNVQFNDAYPITQEGCVYDWVLTVNLast
1 -83.800IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali  100  1MKKILTGLSTTLLLTVLLLTITGGDLKAKAASDLYPLPAPIIDVFPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETETITNDSMQLLERAMFNNVNIVSVMEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTRNLSLPDYQNYPEMVTITMSGSNLIGAIPDFTGMPDLSQLYMADMMITSDDVPDFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTMTNFTNLSNLNNLNLDYNHLNELPSNVLNSIFIENQSGTVPDQIIKQGETCTIQLPIYFQLAEINMLVNPTVLGSYSADIPVEVVTTTNADTESITLDTSELSPGVYNFNVQFNDAYPITQEGCVYDWVLTVN 367
2 -54.900IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  68  1MRKVLMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDVFPDDGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETSTITNDSMQLLERAMFNNVTDVSIMEFGAKLTEFPDITTIPHLKTLFFADPPGRLTRNLSLPNYQNYPEMDTITMSGNNLIGSIPDFTGMPALKQLYMSEMLITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGDTCTIDLPIYFQMEETNMLVSPEVTGEYIGISVIQLPTTVNEEGNTITVDTSALSPGEYKLDVSYNHNYATGGVC.......... 379
3 -37.300IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  27  17.....................................PAPIIEAFPVEAIAEAIAGELDKDSVNDTITQADLDTMTAIPLPSLGLTGEDLSVLNNEV--FTNAIELAIWSNNIGELPDSEALPALENIEANGANITVF------PDANYPNLTNVDLSQNNFGFNIPKFVGMEGLVSINMENAGLSGYIAEDWMNMPNLDSLILNENHLISIPDIFLSQQLGTHSFANQTATYPPTTIKQGENLKVFVPFIYQALD............................................................................................................... 230
4 -36.000IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  15  385.LNNLPKLQTLVLSDNENLTNITAITDLPQLKTLTLDGCGITSIGTLDNLPKLEKLDLKENQITSISEITDLPRLSYLD-----VSVNNLTTIGD-LKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTV-----GKMTELPSLKEFYAQNNSISD-ISMIHDMPNLRKVDASNNLITNI--GTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNI-GTMDNLPDLTYVNLSFNRIPSLAPDLPNLETLNNSYLRSLGTMDGVPKLRILDLQNLSSLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLDSNKIENLTNLQELTLENNKIENISA-LSDLENLNKLV 757
5 -35.600IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  13  29...NGTNAQAATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTD-------TPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDI-----DPLKNLTNLNRLELSSNTISDISAPLANLTTLERLDISSNKVSDISV--LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLATKLTELKLGANQISNISP-LAGLTALTNLELN-ISPISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFYNNKVSNLTNINWLSAGHNQISDLTP-LANLTRITQLG 411
6 -33.400IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  16  1.MKKMGVKIGLCILLIMPFT-ISFSANVSAEENISIKAAQDVVNIPDPALKSYLNGLLGQPSTSD-ITEAQMDTITDVTISNASLTD--LTGLD----YAHNLTILHLTNTGVTDYSLVANIPSLTNLNISGSNLT---TNSIPDLNGLTNVTNLNLSSGKLDNSLTKFNKLPNLTFLNLDNNSITDFMP--LKSLPNLASLFIQFCGVNDFRGIDSFPKLTNLAAFGQNVGSA-ILINSTIKSSALNYNEANQTIF.............................................................................................................. 244
7 -33.400IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  13  2.......................................................................KKKFVYLL-----LLVLFMTVLPFQMLEAQAASTSWIEQE----LDGNEPFIAETEKILSKNRQ-------DITLADLETIQKIHV--FGADSIPNKISDYKNLTALEANYGTITEV-PESVGSLKELVTLNVDENNLQEFPVIFQLPKLEVLYISRGNITEIPTEITTLSHLKVLDVSNQKLVTIPDSILTTHDGKLGMSLAGNQIASDIPANYLDNLFSQHEFMYYDDGTSANILTNGVATDVGDGYITIKSTLSTNSNPFAKVRPLKGADVTVQYLDSNGDTLATPDILS... 346
8 -33.000IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  2................................KFPSIFNKIKPQ-SIQQHPEKNQLNWMLELNKWKEERILTGEIHRPECRNEAAKRINCAFLS-------KQNDIDLSGLNLSTQPP--GLQNFTSINLDNNQLTHF------DATNYDRLVKLSLNSNTLESINIHQGRNVSITHISMNNNCLRNI---DIDRLSSITYFSAAHNKLEFVQ-LESCEWLQYLNLSHNQLTDIV--TGNKEELLLLDLSHNKLASLHPNLNTLLINNNLLSEIKMFYSNFCKVQTLNAA--------NNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTENTSDIRSLFPIIKKSESLNFLN--ISGENNCPTIQ 308
9 -33.000IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  17  1MKKRWNSVFKLVLMVTAILGLVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTT-------EGVQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNPLKNV-----SAIAGLQSIKTLDLTSTQITD-VTPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDI-SPLASLPNLIEVHLKNNQISDVSP------------------LANTSNLFIVTLT--QTITNQPVFYQNNL---------VVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINN............ 315
10 -32.400IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  11  199.EEDLKEIKELNIYAGQGIESLKGLEYMENLERITIQGSDVRNIAPISQLKRLKVVDLSFNKIENVEPLVNLEKLDILKVRTINLSGNKISDIKP-LYNVSSLRKLYVSNNKITDFTGIEQLNKLGTLGVGSNGLVNI-----EPISQMSGIVELNLEKNDIKD-ITSLSKLTGLQSLNLEENYVSDV--SSLSNLINLYELKLATNEIRDIRPIQELGKRIKIDAQRQKVFLDEAYMNEEVKIPVYDVNGTALQNIEGSITNGVIKWNSLGEKMQDMKLRQYMNKHNFE-KEDLLTVKALKITDGKKEGITDFSVEELTLQNVNMKNA--EFISSLRNLKSVDLSYNQIEDIKP-LHSLEDLEKLN 622
11 -32.300IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  18  1.MKRNKTALRILVTLAVVITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLGKADVTDEVTQTDLDSVTHLSAKSAGITT-------EGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDV-----SALAGLKNLKTMDLIYTDITD-VTPLAGLSNLQVLNLDINQITDITP--LAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDV-SPLTGLSNLTEVYLEENQISDVSP-----------------------------------LAKLPNLSIVTLTNQTITNQPV-----------------FYQNKPIVPNVVTGLSGELIPDTISDNGTYTSPN 302
12 -31.900IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  17  1MKKTIKITTSLLLSFACVFS-IGDFTKPHTVEAEIVYPKPVNEIFTDPKLAQVVADWLKLPAATSSVTQTQLNTIKALHFDSKGVQS-------EGVEYLKNLTQVFGYGNQVSDLGPLSNLTKLEVIQMPRNQISDL-----TPIANLTALMSLDFEFNNLQT-IEPIKNLTNMLELNVSANPISDI--NAVKNMTQLEFLTLRDCEVSDLSPVENLSNMLMFWAGRNNISDI-TPLKNMSKLLGLSLFGNQIKDVSV-----------------------------------IKNLTSLEDFDIKANQVSDI-----------------SSLATSTTLETLTLSFNQIIDI-SPLKNLTNLTRLE 302
13 -31.700IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  9  2.................................FPLNDLSLKTQSVLNKITSNTESTIKQHELVSDDAINELSSELVSC-----LGNDKFTPVSEDSNLLNMLSEFKLLREQCFRWGNTLLFENYGAYDKTGSITIEK----SQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLLHSNELNLSSLSLGSVPPL--PEWIEMLSLVYNELDSIQ----VPESCKELELDFNNLTEFPQVPDGITLINNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIAIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEI 343
14 -31.700IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  15  76.QTELNSLTGSFQAINKGIKSIEGVEYLQNITELDVEKNQITDIAPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPISD-------SAVQNLTKLSIFNCYTANVEDISPVKNLVNLKTLSLGSNNIHDI-----SDIEKLTALEYLSFSNNPVEN-PEVIGNLTNLNTLWLYNAQIRNI--DFTANLPKLKSVYLYNNQISNISEVSNWANIEYLELNNNQITDI-TPVANLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIVTPNN-----------ISDNGTYNSPTLSWNLNETKDTKITILNINATYSGTVIQPLTKDSTRPIITADGKVSYPGTTKTTTEFLTDIH 423
15 -31.000IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  19  2MSIKSNIMKIGVCSVMVLVPLSQTSLPSFAAEEIALKESQDVVNIPDPQLKKELNLYLNQAENADITE-AQMATFRNITL-----------------------------NSGIKDLTGIEYLKNITTLSINNINAS------YEPIQTLSSLEKLVINGENVNAIIPDLSVLSNLTFLDLSRTNIDDTIFSKISNIPNLNKLDISNNKITKISELNNLPSLQELRVSDCQITNF-KGIEKFPNLTAFYGDGQLFGIDSFETDGFKNIKSS................................................................................................. 236
16 -30.900IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  18  83..........................PKNNLKSTSENSKTYAELFPDVNLAKIIAKNISGTEINAEVSEAELQTITNLVATNQNITS--LTGIE----HLTALENINVNNNELTTIDSLFNIPTLKSISANNNKITG----NFSLVKTLPELHTLEVLGNAITEL--DIENQPNLVTLSADELELKKLTLKNLSQLNGLSSISIDWGDLESV-TLMNLPEIISVDISGNYLDSDDIHLENLPAVKNLDISSNELTRLPK------------------INDFPLLTTINV--------------------------------RSNKIDRLESSKLVDVPKLATLNADKQAVTLS.............. 351
17 -30.500IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  9  2.................................FPLNDLSLKTQ-QLNKITSNTESTIKQHELVSDDAINELSSELVSC-----LGNDKFTPVSEDCNLLNMLSEFKLLREQCFRWGNTLLFENYESYDKTGSITIEK----NQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGGSNDLLHSNELDLSYLFLGSVPPL--PDWIEMLSLVYNELDSIQ-----PESCKELELDFNNLTEFPQVPDGITLISNLISHIDSFPPKAKKIFISHNKLSETPAIPDTAKVFDCGYNKIQEIRYFPKNLKEARIGYNNIEVVAIPGNLKILFMECNPIKEAFLMPWTLTGICYEI 343
18 -30.400IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  13  14.LKYMPNLKSLTVANAKI-KDPSFFANLKQLNHLALRGNEFSDVTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIED-------TALAKMEQLDYLNLANNKITNVAPLSALKNVTYLTLAGNQIEDIKPLYLSGIEQMKQLEELWIGKNEIKD-VTPLSKMTQLKQLHLPNNELKDITP--LSSLVNLQKLDLEANYISDLTPASNLKKLVFLSFVANEIRDV-RPVIELSKTAYINVQNQKVFLEET............................................................................................................ 276
19 -29.900IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  20  17.LAIIFSLWIIIGNGAKV------------QAETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKS-------QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDL-----SSLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITDITV--LSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDD................................................................................ 275
20 -29.900IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  14  14.IMTVVSLLIMVLGIQGNINQIFPDADLAEGIRAELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLN-----LNGNQITDLSP-LSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDL-----RPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNLEVTGSILKDL--TPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDI-TPVTNLTRLQYLDLGSNEITDLSQKLTSLHLANNQITNISM-LEDLTNLTSLGLQ--NKISDISVLKNLT---------HVTYLQLGYNQIVDV--KIIGGLTNLTSLQLTQNHITDI-SPLANLTKIQYSD 370
21 -29.800IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  13  3VKSNIVKIGVCVLAVPVSQTTLPVFAAEQPGLKASQDNVNI----PDSTFKAYLNGLLGQASTAN-ITEAQMDSLTYITLANINVTD--LTGIE----YAHNIKDLTINNIHATNYNQISGLSNLERLRIMGADVT---SDKIPNLSGLTNLTLLDLSHSAHDDSLTKINTLPKVTSIDLSYNAITDIMP--LKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGK-KLINSDIKSSKLTYNAENQTLYVP............................................................................................................ 248
22 -29.400IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  15  1..............................................................MKKAFLCLSAIVLSLNFVWINPITGS----ASKIETTKETNQQVNLKNNVTDIVEDLGGQTWL--INEVNRQLAPKTVDVNLTFEDLAKITTISLNNRSLTGEVPEIKNLVSLQRLYLFSNKLSGEIPAELGELTKLTELRLDYNELSGIPD--GLGNISEIALQNNRLVGIPLSLENRTGKNEVNVSGNQVTNSQQSEPSVYSAPEYSGHIKANNSFISNLTND................................................................................ 233
23 -29.300IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  15  1MYKLVKIILALFLITTVFLSNVKAAPTDVVNIPDPVLNSGLKNIIGNPFLDEITEANMATITVADLSNMSGAPGYPVT---------GLIKDL-TGLDKAVNMTKLYFSNSQIKNLDKIKNLPNLKKIVAVTTGLNNI-----SALGEMPALEEVELGGDYITD-FTPLLEKENLTSFSYNSYAWSNPAYKNFTKLKSLVKLDLTWNNITDLSPLTENDHITNLNLNYNQFTNV-APIATMKNLKVLYLNNNNLTSI------------------DALNTLRGLTIAYAD............................................................................. 266
24 -29.200IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  17  1MKKALKLFLA----------TICMFIMIYPSTAAHAEETNIVN-IPDANLKTYLNGLLKQASDAP-ITKTQMNTIQTVTLSGSTYTD--LTGLE----EAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVK---DSLFVDLNGLVNLQSLSINGSEVTHNFKTFNKLPKLTYLYAQNSKITDI--SALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNNPRITLKSGKLDYNETNQTLYLP............................................................................................................. 241
25 -27.900IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  14  1.........................................................MKQRKTSVLHVLLVVTAILGISLWVNASHG------------MKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEV-----TQTDLNQITKLEADDKGINS-IEGIQYLTNLNMLGVSSNQITNITP--LANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDV-TPLANLTKLNYLDLRENQISDASP............................................................................................................ 181
26 -26.800IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  18  2.........................................................................................LKKIFIALIALVVIINTVSFTSVSASTPTW------QTMNNNEPFIKEIETETGKTRANITQTD--ALRVTGASDIPANIDMLTHLTLLKAVQGTISSV-PNSVGNLKELKILNLNTNHLSNFPTVYQLPKLEELQLNDGTIEEIPATITNMSHLKFLTVNNNRLVKVPTIIFSTNWSNSSTGEL............................................................................................. 186
27 -24.800IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  15  1MKFNWKVVLLFILAFIVPVYSKAVETGKEVPKSPELLDDKSSTLKNVNTPKNLKASPLANSTIADLFPDEGMAKTIANQLGRTENN---------------NFQTPTKTDWKVDDVVTEVELNRMWYLTSVAT-------GSIEGIQYLPNLYDVRLQFDKQCKDLSPFNGYSQLYRLNINNGNISDISPLTELSAPTLNDIDLGGNNISDLSLFPKLPNLEEISLERNNISDVPLAKFASTKIKIFNLDENHITDLSS............................................................................................................ 252
28 -24.200IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  16  17..VSNPLLTFAATNDVIDNTT--EITTDKETSSTQPTIKNTLKAFPDDNFASEVAAAFEMQATDT-ISEEQLATLTSLD-----CHNSSITDM-TGIEKLTGLTKLICTSNNITTL-DLSQNTNLTYLACDSNKLTNL------DVTPLTKLTYLNCDTNKLTKL--DVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL--DVSQNKLLNRLNCDTNNITKLDIQLTFLDCSSNKLTEI--DVTPLTQLTYFDCSVNPDVSTLSKLTTLHCIQTDLLEIDLTLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITEL.............. 363
29 -23.800IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  15  13..................................................RARLALALALASVLSGPPAVACPTKCTCSAASVDCHGLGLRAVPRGI---RNAERLDLDRNNITRITKFAGLKNLRVLHLEDNQVSVIER---GAFQDLKQLERLRLNKNKLQVLPELFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDFRALRDLEILTLNNNNISRILVSFNHMPKIRTLRLHSNHLYNLPEGIVEIRLEQNSIKAIPAGFTQYKKLKRIDISKNQAFQGLKSLTSLVLYGNKITEIALQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKLFAPLQSIQTL. 432
30 -23.500IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  17  57..NNLKNQLVQAGTKTYNDYF--PDDNLAKEVAETMNKNADESV-TVEELAKVTKLDARSQGIEDSTGIEYLTGLEVLNLEDNQLKSIDVS-------KNLNLKELTCSNNPLANL-DVSKNLALEELTCENNELTQL------DVSQNTALEYLYCPRNQLTKL--DVSKNSALRYLACDVNQLTNL---DVSKNPALTNLGCTKNQLTDL-DVSQNPNLGTLVCSDNQLTNL--DVSQNQALENLACDNNELKNID----------NQALSLKELSCENNQLTNLDTTQNLALEILYCDDNQLTDLDVRKNVNLLILFCNNNQLTNL-----AVGETIAKVRCNNNQLKDV.............. 368
31 -20.300IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  15  763.............................NVGHLKLTFCSVGPAFVLQHLRRPVALQLDYNSVGDI--LPCLGVCKALYLRDNNISDRGICKLIECALHCEQLQKLALFNNKLTDAKLLACRQNFLALRLGNNYITAAGAQVLAELRGNTSLQFLGFWGNRVGDLAEALGDHQSLRWLSLVGNNIGSVGAQALALMVMLEELCLEENHLQDAEGLKKNSSLKILKLSNNCITYLLQALERNDTILEVWLRGNTFSL............................................................................................................... 1025
32 -17.200CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  15  999..LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF------GNQVTDLKP-LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDIT-----PLGILTNLDELSLNGNQL-KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISTKLQRLFFYNNKVSDV-SSLANLTNINWLSISDLTPLANLTRITQLGLNDQAWTNAPVNY-TVKNVTGALIAPATISDGGSYTEPDITWN----LPSYTNEVSYTFS.. 1357
33 -17.000IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  11  4.....................................................................................................................................................TSQLRPTGTF------------CSYSAET--SADIKSEITPIQIEEARASGRLYIKDCDIEYLPQL--PNEITSVTIENNNLTTLTGLPVNTQNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGIECLTVCHCYISGVPESVRYLEIKGSATDSIKNVPLSSLSINSYNPENQARIDNLISPSLKTLSLTGSNIILPEKLPESVTSVTIHA 209
34 -13.900IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali follow..  13  176......................................TSFALAFYSSGIEKVIIRDNNYPTAPSLLTTEGMSNLMEVDLSGLDTSA--VTTMWDMFNSCRALEELDVSHFDTSSVTNMSYMRNLEVLDVSNLDTSSVTNMY---FEDCTSLEELDVSHSSVTDMYRVFNGCEKLKKLDVSNFDTSSAT-QMFRNCSALEKLDVSNFNTSLVTDMRAMTSLEALDVSNSSVTNMAAMFSDNEKVEKLDLSTSSVTNMGTMFKNCTALKSLYLDNFTHAASSTDM................................................................................... 441
35 -10.500IDP91295 SopD-like protein STM0972 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  222.......................................................................................................................................................................SFNITTQFFKIGYWELEGEVL-FDMVHPTLSYLLQAYKPSLSSDLIETNTMLFSDVLNKDYDDYQNNKREIDAI--LRRIYRSHNNTLFISEK........................................................................................................... 311
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.