current user: public
If you have questions about the server, please let us know.

Query: IDP05088 LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_0871 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .  650    .  660    .  670    .  680    .  690    .  700    .  710    .  720    .  730    .  740    .  750    .  760    .  770    .  780    .  790    .  800    .  810    .  820    .  830    .  840    .  850    .  860    .  870    .  880    .  890    .  900    .  910    .  920    .  930    .  940    .  950    .  960    .
# Score Template Links and tools%idFirst MNFLRKSFNQKINKLSSSFIVVLLVCMNFLIHLPYKAEAATTELKGLGDVSYYNAIIFGDHSATSADIEGAMAIQKNMNASSYTVLAAATGANNLAGATWVDEGYPSLLLGGQFTKAGAGQVIIQDGTVAMTKDGDPDSAMKTSYDRISYKEQAEIDAKFKEFRKDVDGVIGDASKLQTDKPKPNMSFGIGEDVNNPNIYVSSGQTGKKAFDVTDVFLPNVENKDFIVIYSDAEEVSFGSGAILYDTRNTGMATDLINTSQAYDPNSSFTELASKVIWVFPNATKITTKGYGVVGSVFAPNAVVETKGGSINGQAYVGGLHQRDGFEVHNFKFNWPKWKKPAAKKGNLQIKKVDENNENIVLKDAKFDVIDKENNVVDTVTTNEKGIAEVKDLPFGDYFVKEISAPEGYIKIDAPVKVTIDNTNIIEFVIKNTKKLENGQLKLLKKDSESGQLLPGAKFDVIDKDGKVVETIVTDDKGEALSKQLPVGSYTLKEVEAPKGYELSSSSVSVDVEANKVVTVDVVNKKIPEKVTGQFEVVKVDANDKTKLLSGAEFEVYKDGKKVAELKTGESGKVMSPKLPLGEYTVKETKAPAGYKLSDKEWKVTIQNEKEVVKVEAENEKILGSLQIIKMDDKDQTKRLAGAEFTLKDVKGNVVKEGITTDKSGTVKVDGLVPGEYTLEETKAPEGYKALEVTIEVNVVANEVVKQDVLNEKVKEEITGQLEITKVDANDINKKLAGAVFEIWKDGTKIDTLTSDENGKAISKELDPGDYILKEVQAPEGYELSDKEIEFTISNQKFEVVKLQITNKKETSKGPENPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGGETEKPGKETEKPGEGMENPDKEKENPTLPEKGQGTSHAQQLPATGHDMNYLPFIGFALVLLGIRLRFMTKNNLast
1 -125.000IDP05088 LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_0871 [Bacillus anthracis str. Ames]  ali  100  1MNFLRKSFNQKINKLSSSFIVVLLVCMNFLIHLPYKAEAATTELKGLGDVSYYNAIIFGDHSATSADIEGAMAIQKNMNASSYTVLAAATGANNLAGATWVDEGYPSLLLGGQFTKAGAGQVIIQDGTVAMTKDGDPDSAMKTSYDRISYKEQAEIDAKFKEFRKDVDGVIGDASKLQTDKPKPNMSFGIGEDVNNPNIYVSSGQTGKKAFDVTDVFLPNVENKDFIVIYSDAEEVSFGSGAILYDTRNTGMATDLINTSQAYDPNSSFTELASKVIWVFPNATKITTKGYGVVGSVFAPNAVVETKGGSINGQAYVGGLHQRDGFEVHNFKFNWPKWKKPAAKKGNLQIKKVDENNENIVLKDAKFDVIDKENNVVDTVTTNEKGIAEVKDLPFGDYFVKEISAPEGYIKIDAPVKVTIDNTNIIEFVIKNTKKLENGQLKLLKKDSESGQLLPGAKFDVIDKDGKVVETIVTDDKGEALSKQLPVGSYTLKEVEAPKGYELSSSSVSVDVEANKVVTVDVVNKKIPEKVTGQFEVVKVDANDKTKLLSGAEFEVYKDGKKVAELKTGESGKVMSPKLPLGEYTVKETKAPAGYKLSDKEWKVTIQNEKEVVKVEAENEKILGSLQIIKMDDKDQTKRLAGAEFTLKDVKGNVVKEGITTDKSGTVKVDGLVPGEYTLEETKAPEGYKALEVTIEVNVVANEVVKQDVLNEKVKEEITGQLEITKVDANDINKKLAGAVFEIWKDGTKIDTLTSDENGKAISKELDPGDYILKEVQAPEGYELSDKEIEFTISNQKFEVVKLQITNKKETSKGPENPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGEETEKPGGETEKPGKETEKPGEGMENPDKEKENPTLPEKGQGTSHAQQLPATGHDMNYLPFIGFALVLLGIRLRFMTKNN 969
2 -92.100IDP05567 pepdidoglycan bound protein [Listeria monocytogenes EGD-e] lmo2576 [Listeria monocytogenes EGD-e]  ali follow..  25  862................................................................................................................................................................................................................................................................................................................................KGETEKTKNIEVKITTGDGTGTGETGKIILNKVDKADPSIPLEGATFDLYANDEK-VDTQTTDKNGVIEFDDLVYGDYTLKEVSAPEGYTLPTASTENIQVKLEQDEKVVEKMPIKETGEVHLVKTDKATGATLAGAEFSLYDKSGAELNGLTTDENGELTIHNLDLGSYYLKETKAPEGYKLSEKTWEFSVESGQVDAIEI--QAENEKDLGEAVLTKVDSET-NAKLSGAKFNLLNDSGEVTNLVSDENGEIRVQNLEPGDYAFQETEAPTNYDLATNTWPFTIVAGQTSATMVTKPDVDTGEVILVKQDSAT-GETLEGAVFDLMTADGAIVASNLTTDANGEITVTNLAPGKYSFKETKAPEGYELATDVWEFTIAPNQPEKITITAKLAPIPDAGSVKIIKQDS-ENGVRLAGAEFSLIAENGETTNLKTDEAGELEVNNLAPGNYRIQETKAPDGYQLESTPWQFEIVANDTSQVTVIAENADVAETGAVRLIKTDSETGTRLSGAVFSLLDESGKVIQANLTTDENGEIFIDGLTPGNYSLKETKAPDGYELAEQPWNFQIVKGQVDAVIIKAENSPIIANGAISFEGDETDKPESIEIPVRKTDTLVTKLPQTGDKTSFPRVILGGSAVLMSLLYLRKKSS 1530
3 -82.900IDP05697 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2178 [Listeria monocytogenes EGD-e]  ali follow..  26  941........................................................................................................................................................................................................................................................................................TAPIKVTYSTISLMSGLVSNTATTASPDYGSLPMTYKSRTTSISPAFTIGSG-------SGTATIGSLEITKVDKKDNSKKLTGAKFQLYTLEGDKAQEATTDSDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGKITVTADIATSVTIENTEQTGSVVLLKEDSATKDAIAGAEFELQNADGTKVDNLVSNADGKIEVTDLAPGDYQFVETKAPTGYVLDGAPTKFTVEFNQEAAVIVTKE--NTAKTGSVVLTKEDSVS-KATLSGAEFELQNATGTKDNLTTNADGKLEVTDLAPGDYKFVETKAPTGYELDATPVTFTIEFNQAAVNVTKENVAKTGSVVLTKLDS-KSRSNLAGAEFELQTKLGVSLKDKVVTEANGQLQIDNLAPGDYQLVETKAPTGYDLDATPVEFTIEFNQKAP--IQVTKTNTMSTGSVVLTKTDG-ETKALLANATFKLVDDNNVTENLTTDASGKLEITNLAPGDYQLIETKAPAGYELDTVPVDVKITFDQKETLQVTKTNLKTVVSGKVIAEFVDT-KGNVLAEKEIHTGIVGDKYATK--AKDIKGYKLTKQPTNKEGVFKETEQKVTFVYEKNKAPIVVNPDKPVTPVKPTKPVDPA-----------------------KKPTVKTSLPSTGDESPYIIFTGLFASFMGLFLLRKSKK. 1596
4 -79.100IDP05452 collagen adhesion protein, C-terminal [Bacillus anthracis str. Sterne] BAS5207 [Bacillus anthracis str. Sterne]  ali follow..  21  4...........................................................................VKLSLLAYALAIINLSKYYDKNTSPIKF---TITESQTTSATVTAKNSLTKGGIELTKVNAADEKETLEGAVFKIVNR-------DTNEDARTNLVTNSEGKLVVDDLRPGNYKLIETKAPTYYDVNVEPIEFTIEKGQQTLL----------------PLTFKNSLTKGKVKLIKEDDVESSIALAGAVFTLQDANGTEIAKDLKTDEHGVLVIPDLAPGDYQFIETAAPEHYKLDQTPIKFTIERSQTKHV-------FVTATNSLTKGSVELIKVDDVEENTTLEGAVFKIVNKDGHDVTDLTTDKNGRLVVDELPPGDYEFIETKAPTHYDLNETPIKFTVKKGQEKIASVTATNSLTKGAVELSKVDDIDGSTLKDAVFKIVDMNGNDVTDLTTNKDGKISVSDLRPGDYQFVETKAPTHYDLNQTPINFTVEKSQTATASV--TAKNSLTKGAVELTKVDDID-GTTLEGAIFKIVDQNGNDTDLTTDKDGKISVSDLRPGDYQFVETKAPTHYDLNQTPINFTVEKSQTTASVTATNSLTKGAVELTKVDDID-GATLEGAVFKIVDMNGNDVRTDLTTDKDGKISVSDLRPGDYQFIETKAPKHYDLNQNPINFTVEKSQTATASV--TATNSLTKGAVELMKVDDID-GTTLEGAIFKIVDSNGVRADLTTDKDGKISVSDLRPGDYQFIETKAPTGYDLNAKPIPFTITKGQSQVTSVTALNSLTT--GSMELTKVDIDHNGTLEGAIFNILDQDGKVVREGLKTDGHGKLIVNDLKPGNYQLVETKAPEGYQLDASPISFTIEKAQASPLQITVSNKKVESSSGGDNKPITPPNKE............................................... 815
5 -75.500IDP06545 gene: fms18; LPXTG family cell surface protein Fms18 [Enterococcus faecium DO] AFK59452 [Enterococcus faecium DO]  ali follow..  18  140.......................................................................................................................................................................................................................................................................................................NGYTLHSIKRSDGSAVNIAAIESKINQ------AIADYQKKPSFHNSTVKTVLGQSTTVTDTNGLNLSEFDEVVENIANRVNGNQLVITPNANSKESGELTLKKSANTGTPVAYKMAGQQTLMAGAIDKPNTYTIK-IDVETEGSLKIKKVDKETGNVVPGTVFHLDFGKTLPAKDVTTDKEGIATLDEIPHAKVTITEKSVPAPYTIDTTPITATIKSGETISVTS----KNTREKGQIILNKMGVENDKYSLAGNTFAIRKDSPTVQEMTTDEKGHAEANALELGTYYVTETKASNGFVNTFKPVKVELNYVNQTVNVKGQNQEITGETTLTKEDKDTGKAEFKGAEYTLFTAKDGQAVKTLTLDEKNQVAVKHLAINEYYWQETKAPEGYTLDETKYPVSIKKVDDNEKNAVITAKEQVIRFGFDFFKFAGSTAETGFNDLTFKVSPLEGTAYNEQLGFDGYGKFENLPYGDYLLEEVEAPEGFQKITPLEIRSTFKENKADYTKSEYIFTITEKGQKQPIKTVTVPYEKLTNKAFSVSLNRLMLYDGKELTDLDSTELVDKLSYNLHEIKEDWYVVAQAIDVEATKAAQEKDEKAKPVVIAETTAT-KKVPTTPSAPEQPEIPTVPSDSQESSPTVKTFPQTGEKNSVLLFIGFTLIFATAGYYFWNRRN 1075
6 -72.300IDP05077 hypothetical protein lmo1115 [Listeria monocytogenes EGD-e] lmo1115 [Listeria monocytogenes EGD-e]  ali follow..  16  28.......................................................................................................................................................................................................................................................................................TSSTSVHASDLVLNEPTAYSYTGVSPHLGYAITHNPIYVMKMDGKEIMAMVNRHDTLPSWHNQEVKVTVGESITLADSHG-VLSGMSLESNNTNATLQNNITITPNANSNDGSITYRKVPQNEVGTSIVYTKPQHQTLVEFHLESAKQATVK-VDVIKLGNVQITKVDEETGRPLPDTTMKFEY-NGTSTELVTDSNGIALIKDIPEGTKITITEVKAPNGYVNKGVSQVVTIEPNKTIELTF----DNKEQLGIATLTKAGEKYNANVVAGVTYRIEKKGDTVATVTTDEKGQWHSPNLYLGEYQAVEVSAPAGYILDTRPIPFSLTYAGQEVAIKATNEFQTLDLRLFKDEESILSIQGQEKVFGVFTREANALLGYQTVSDGVASFELKLPQGKYYLKELEAGTSHVLNDTEYDFKFTAENNNATYPIYIYQDTVAVGNETMLKIARTPYDGLGTGAIFTLENDNEVIQEVTIDKDGQGNFKNIPVGTFYLKEKSASSTHYLSEKVIRIESTKDGIKAFTILLEIENDLKKGTAELTKKDVSTGELLPNTGIRILDEEKNTI-AEGRTDDKGIYTFEKLPAGKYYFQEYDAPTGYQLDDTPMLFEITENGEVVKCEMTNNKIPEKI---------------------------TSLPQTGDTTNITI-LGMLLSVSTLGVLYFRRKK 869
7 -62.700IDP01796 cell wall surface anchor family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA5258 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  103..............................................................................................................................................................................................................................................................................................................................................................SELGVATTEEAHYATQLAVWIAANELTDLVAKNERVHNLMKRLVEASKKETGSQDVFFKVNPVDSQTATQNGDYLETGFYAVQTNAVSGSYTILPENA-------PKGLRIVNENGEEKSTLSINEKFKILLKDTSSGNFKMKVKSTLTNLQAIAFKGSEKVQNTTVLEKISTDLVVNWESVGSLKIMKLGEK--KEVLKGAVFEVSNENF-KQNVTTSDKGIAELGNLPIGIYSVKEIQAPAGYVLDRSVKKIEVK-TGETAVLELKNENVKGELEITKVDVADGNTKLPNAEFTIYNEQGKEV-VKGKTDEKGVAKF-KLPYGKYTYKETIAPNGYVINEETFAFEIKENGE---IIKHIVQDKKVEGELEITKVDVADGNTKLPNAEFTIYNQGKEVVKGKTNEQGIAKF-KLPYGKYTYKETIAPNGYVINEEKFGFEIKENGE-IIKHIVKNKKEEKASFPSKPNKPTPNGEVKPSADVKPMQQPSTHNEVRLATGGVSNQFTSLFVLGISFI..................................................................................................... 612
8 -62.200IDP05655 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0159 [Listeria monocytogenes EGD-e]  ali follow..  25  164..............................................................................................................................................................................................................................................................................ENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVR--------VNYAKVNIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFS-------ATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQA---ITVTKENTLNTGSVELTKLDAAT-KATLAGATFELQDKEGNTTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETVVKVTKENTLEVGSVELTKLDS-ATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQ-VVKVTKENTLEVGSVELTKLDS-ATKATLAGATFELQDKEGNTTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTP--LPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQ-----------------------------------------------------------SLPKTGDTNSFAGLGVILIALSLSGLLLKRK.. 793
9 -54.900IDP05436 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2085 [Listeria monocytogenes EGD-e]  ali follow..  16  1................................................................................................................................................................................................................................................................................................................................................................MQRKLIGSFFILMVLLIIGSTSEKVQASPTSSNGWQLKWAIKNNDFEDVDITDYGQNAGTTNVWMVNQAGVDAWGTTNPTGNELNSDGIGPVYQDIRT-IPGSNLTWKFSHRGRTLIGSPESQTEVSRVSNGETWGSFEGNYTVPAGQTITRLTFNPISTANGSLTSGNFLDDVQLYINVNGAKIGDV-QQDSEEPAPGVKVDLLTKDGTKESATTNNIGSYLFTDVLPGDYQVKFSLPNNDFIFSKANQGNDKSLNSKPDKTGIASVNVPNL-GKVEIQKLSGDKALSGAVYAIKDNSQSEV-AKITTNQNGTGTAEGLPPGNYTATEVTAPLGYQKNTTPKKFTITYGDTN--PVKLTFQNAEKTGSITIFKQD-EANKKGLANAVFDVKSDGTTLKKVTTNSKGYALAENLQPGTYVITEVTAPPGYEKSANEIRVTIPFNPQKTINITFSDNKIM--VPLKPTPTKGSTVVKVSGETTKITALPQTGDSSSSSTIFTGLLIV--VASGLFVYRR................................................................................................... 561
10 -51.900IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630]  ali follow..  18  76.............................................................................................................................................................................................................................................................................................................NTDFKNGYKTRADASSRMSADQISDVALS----------EYVKQYGEAHKELNYKQVYLLEQCVVWQRLSVHWQCDNVRASYDEIPKATQDEVFAGAKAFVKENKGRYECGGYIYSGEGQELGQF------WAKLNVGNAKLQKTDGNGNYSIAGATYGVFSDKDKQLATLTTDKNGNTDVIEVKAGTVYIKELSAPAGYKVDKTIYPLTIKAGETATLKVSDT--PKVTDTLVELFKIDMEQGNASLAGAEFTWKYYAGFYNKAETDSDGTTHYAVLPLGTLTVEETKAPNGYLLDGAYMQAGDKSEQIKGQFSVSDKVIRGGVKIQKRDLETGDTTLKDTAFDIISLNDNEVVKTIHTDLEGVASTDLLPYGKFRIVESEAPDGYLTDGAKPIDFAITENGKIVDLTDEIYNQIKRGDIEGVKIGA-GTHKRLADVPFRITKTTGESHVVVTDDNGQFSTADWASHKHNTNAGKTSEDGVWFGASEPDDSKGALPYDAYIIEELKCESNKGFELIPIADEEEMKVEISYTFNASALGGKNLVTTTATDKDGTVTLEGLEVGQYKLKRVESDYTFIADSENMKVEVASNTDEPKKVTEHKDIEDEGQTITFKEKPEVPEKPEQPQTPEKPSRPSDSPKTGDSTNLMFIVMLLVSGGGLAGTYLYKRR 1009
11 -50.700IDP05502 putative collagen-binding surface protein [Clostridium difficile 630] CD0386 [Peptoclostridium difficile 630]  ali follow..  17  70.......................................................................................................................................................................................................................................................................................................AYCIDINTDFKNGYKTRTDASSRMSADQISDVALSLEYVKQYGEAH---------KELNYKQVYLLEQCVVWQRLSVHWQCDNVRASYDEIPKATQDEVFAGAKAFVKENKGRYECGGYIYSGEGQELGQFWAKLNVGNKLQKTSSNASITDGNGNYSIAGATYGVFADKDKQLATLTTNENGNTDVVEVTTGTVYIRELSAPAGYKVDKTVYSLKVEAGKTATLKVSD--TPKVTDTLIELFKIDMETGNASLAGAEFTWKYYAGFYNKAETDSDGTTHYAVLPLGTLTVEETKAPNGYLLDGAYMQAGDKSEQIKGQFSVSDKVIRGGVKIQKRDLETGSATLKDTAFDIISLNDNEVVKTIHTDIEGVASTDLLPYGKFRIVESEAPNGYLTDGAKPIDFAITENGKIVDLTHSIYNQIKRGDIEGVKIGA-GTHKRLADVPFRITSKTTSHVVVTDDNGQFSTSADWASHKHNTNAGKTSEDGVWFGTSEPDDSKGALPYDTYIIEELRSDSNKGFELIPPADDEAMKVEIAYTFNASELGGKNLVHTTATDKDGTITLEGLEVGQYKLKRVESDYTFTADSETMKVEVASNPDEPKKVTEHKDIEDEGQTITFKEKPEVPEEPETPQTPEKPSRPSDSPKTGDNTNLYLLALLLTSGAGLAGIFFYKRR 1009
12 -44.700IDP06516 von Willebrand factor, type A [Enterococcus faecium DO] EAN10603 [Enterococcus faecium DO]  ali follow..  14  508.......................................................................................................................................................................................................................................................................................................GRNVLKNIADLEEDGVTPRYYNANNKNDIVTALEDISSTFKRTIQQATLYDET--FNVSPFGAGRSADIQFYHLDPGENGMKTTYVGRENQAYKFSPISLGKYQVKDAGAQDGYIQNLEDYENDITTGRMYFPSSSIRYEHKGRNFQVSKKG-QNGEPLAGVEFALYDQNPESIETSKTTTDGIAIFETKVSDIFWIREIAGPPRYQLVDETYQFQIKKYAADELYVKLEMRNEFKPIHMNINKLIEGS-NMPINGAEFELYETDGN-----GLEIGYPVAKGLSGVNEVEEEKGRLTFYSVDEDGKYVIVDGEKVIHPIGEPD----------SFVYKDSEETTNYAEYKIIESQNPEGFKEPDENDTWILRLYDNAIGTIQLKQTGEENWQYL-------TYTTDEEDRLWVAFTAYNTFDYREIRVRKLDHE--GHTLDGAGFDIRKVGRAVGVEKYVDLNYDQPLHLSIGEYEVSESVAPNGYRLSDQVFQFALNEEGKFIIVLQVTLEDELAPIDLELLKIDSMNSRRLEGAEFSIEKQNSAGEYEAPDPNDSSLFNASDLLEGVYRIKEVKSPDSYRKLPGYFILEISYREEPDIENDRVVPGKEAGTLKVEISYYPNETNRIRLQLSVGNDPENPLPATGGSGRLFYILLAAFFMALAGAAYRQSKK 1341
13 -44.200IDP91037 gene: sdrD; Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein [Staphylococcus aureus subsp. aureus Mu3] SAHV_0560 [Staphylococcus aureus subsp. aureus Mu3]  ali follow..  20  586..................................................................................................................................................................................................................................................................................................................................................................QELGEKGVGNVTVTVFDNNTNKVGEAVTKEDGSYLIPNLPNGDYRVEFSNLPKGYEVTPSKQGNNEELDSNGLSSVITVNGKDNGDYVWEDTNKNDEKGISGVTVTLKDENGNVLKTVTTDADGKYKFTDLDNGNYKVEFT-TPEGYTPTTVTSGSDIEKDSNGLTTTGVINGADNMTLDSGFYKEDTNKDGKGISGVTVTLKNENGELQTTKTDKDGKYQFTGLENGTYKV-EFETPSGYT-SNGTSTTGVIKDKDNDTIDSGFYKPTYNLG---EDTNKNGKGISGVTVTLKDENDKVL-KTVTTDENGKYQFTDLNNGTYKV-EFETPSGYTPTSVTSGNDTEKDSNGLTTTGVIKDADNMTLDSGFYKTDSNKDGKGIKDVKVILLNKGEVIGTTKTDENGKYRFDNLDSGKYKV-IFEKPTGLTQTGTNTTEDDKDADGGEVDVTITDHDDFTLDNGYYEEETDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS............................................................................................... 1192
14 -34.500IDP06530 surface protein [Enterococcus faecium DO] AFK59398 [Enterococcus faecium DO]  ali follow..  18  1..........................................................................................................................................................................................................................................................................................................................................................................................................................................................MTGF-------DENTGVALYDPAESAL-TFTTDTEGSISVNGLIDGNYTLVETKAPDGYQLTNPQKETTFIVKNGKL----------------------QQTTGIIHGADEANLGNPNGVVNR-TTTDNTITVENVQNYGDFHFIKQDVNTQEKLADAEFSILRAKDPTVKLMKKIANLASGEYPYAWSDEVTGS---------------DWEEVKLISDSEGKFSIEGLKQGAYCLQETKAPEGYALPKNEAAYTETVDDDPTTSDETTIDNQPSTGGMGIIVFIL-VGTALVGGAVIYFKKRHQETEA......................................................................................................................................................................................................................... 271
15 -33.400IDP05223 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0160 [Listeria monocytogenes EGD-e]  ali follow..  18  24..........................................................................................................................................................................................................................................................................................................................................................QTNFVKAATNYGSDFLKT--VELLDADGNPQTDFGYYDSIKVHYTNVKEGDTM--EFVLPPELKIVTD-LDFSLKDHDGNTV--HVIAKKSTGQVVITFTDFEKNSNISGYLDFWTNWDKSLVEGNENVPTIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQNIQNAVYEDF-DFNSIKAFHGEFDPDDNFTPGAEVP--TTDGFKVDLGNLTDSVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELTKTDDSSQKNPLEGAEFKLVNGAGATVQTGLKTNADGKLAISNLKYDTYQLIETKAPQGYVLDASPVKFTIDDTHQS---LFVSKENTAIKGSVSLEKVD-RDTKSLLADAEFELQDKDGNTTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKI----------------------------------------------------------------------------------------------------ISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK. 565
16 -29.900IDP06520 gene: ebpCfm; pilus subunit protein EbpCfm (Fms9) [Enterococcus faecium DO] AFK59016 [Enterococcus faecium DO]  ali follow..  13  29.................................................................................................................................................................................................................................................................................................................................................KVFAEETAAQVILHKMSEFDQYQGLADISFSVYNTPGTPVASGTTDADGNVTLSNGKDAVYTIKEEPKDGVSAAANMVLAFPVYEMIKQADGSYKYGTEELDTIHLTKIGTAENEALNGAEFIISKEEGTPSVAEASIEKGQLIVNHLEVGKYNLEEVKAPDNAEMIEKQTITPFEILANSQTPVEKTIKNDTSKVDKTTPQLNGKDVA---EKIQYEISVN-------IPLGIADKEGTQNKYTTFKLIDTHD-AALTFDND------------------------SSGTYAYALYDGNKEIDPVNYSV-TEQTDGFTVSVDPNYIPSLTPGGTLKFVYYMHLNEKADPTKGFSNQANVDNGHTNDQTPP-----SVDVVTGGKRFVKVDGDTSDQTLAGAEFVVRDQDSSATVFTTTSNGLIDVTGLKYGTYYLEETKAPEKYVPLTNRVAFTIDEQSYV---------------------------------------TAGQLISPEKIPNKHK---------------------------------------------------------------------------------GTLPSTGGKGIYVYIGAGVVLLLIAGLYFARRKH 622
17 -26.100IDP92699 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus USA300_TCH1516] YP_001574462 [Staphylococcus aureus subsp. aureus USA300_TCH1516]  ali follow..  12  529..................................................................................................................................................................................................................................................................................................................................................................................SFSNNVATLDFGDINSAYIIKVVSKYTPTSDGELDIAQGTSMRTTDKYGYYNYAGYSNFIVTSNEEKLYKI--VQGTDSKEKPMANVLVTLTYPDGT-TKSVRTDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSLDTGFYKEDTNKDGPGIKDVKVTLKDSTGKIGTTTTDASGKYKFTDLDNGNYTV-EFETPAGYTPTVKNTTADDKDSNGLTTTGVIKDADNMTLDS--YDSNKDGKQIKDVTVTLQNEKGEVIGTT-KTDENGKYRFDNLDSGKYKVIFE-KPAGLT-DADGGEVDVTITDHDDFTLDNGYFEEDTSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-HTPVKPMSTTKDHHNKAKA------------------------------------------LPETGSENNGSNNATLFGGLFAALG----------------SLLLFGRRKKQ 1152
18 -25.800IDP06539 gene: fms13; LPXTG family cell surface protein Fms13 [Enterococcus faecium DO] AFK58158 [Enterococcus faecium DO]  ali follow..  16  20.................................................................................................................................................................................................................................................................................................................................................................................................................................IGIFGNGKLVKAEEVAQKPSEVTITLHKSTDFGEENIPGVDFDLFDYRLTSIDKQTTNEAGEAVFSTVRDKVYLFLETYSPAHISRIASPMVVMMPVMMPDMVDGVWDGSTWKDTYNTDVHLYPKNEIREADKQMNVEESDLRQVTIINEAGEQETISYIDLERGKYTI-TAPIPKNYKITDT-PTVGLTYYDQEIEVRA------GETILTKGQDYIVEVVSNGFVVTI-LTEENGVAKVDTLGRLADARGGDLTITYNLKVSTELEADDFHNNT-AVIEIGRNDEFDYEEGVEPPEKVTTGGRKFEKYDA-SSSELLKDARFELWNEDRQATEFVADGNGYFEVQGLDYGTYQMKETMAPEGYVLPTGEAAFTEFIISYGSYNEEIQIVGVENPGPERVP----------------------------------------------------------------------------------------------------------------NMKRGSLPATGGNGLLAFLLIGISLMIGAYSWYRKSKM 561
19 -24.500IDP05117 putative collagen-binding protein [Clostridium difficile 630] CD2831 [Peptoclostridium difficile 630]  ali follow..  14  333...................................................................................................................................................................................................................................................................................................................................................KNKDINYSIQVNEYDELPEGLTLINGSVSVVTSDGKEVSDFNIEQSKSVNFGNID-KSYTVKRISDKNAKHGNKYKNVARIESDGKKIQEDDATVSIFDRGDDYLLTKGHSGAT---INYQIINDDKSPISNVVITDN-------IPEGMRLTTSGEAGHDFRVVEIPMNGSWTPSYKVEEKRNESGQVDKVITGFTINLSKEEVESKFFIAYTLKVISIEDSYINRAVLDANNSEIDKNDEINFKKNSGLISAKKEVDKKVLNSS-DNQIVKYKINMSTYGVYDAGQVNLLDEVNSVLEISNIKYS---------LELKKEAGDGKNTIRLVNKYEFKQIKEGEPVQSWVTFDANFTNVKVGETIRNVAQINVETTKQGYAFEAKKVDA-LDKNVLSGAKFNLEDAFGNIKDLVSDEDGIIQSSVKNPGTYYLVEIMAPRGYEKLKDKIKVEIGNKDIGRIVDIGNIENIRQENPPVNPPAPPNTDEPIVNPPVP--PSTDKPRKPSSSSDTEDTIVINPPVPPSEDIINPPIPEVLNPPVPPSEEMIETPVKQI-------------IPIPEVVKPSVSEEKNNKVKDDTLVNPPVPPKTGDSTTIIGEILLVIGAIVGLIVLRRNKN 970
20 -23.200IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  18  623...........................................................................................................................................................................................................................................................................................................................................................................................................................................................VQGTDSKEKPMANVLVTLTYPDG-TTKSVRTDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSLDTGFYKEDTNKDGPGIKDVKVTLKDSTGKIGTTTTDASGKYKFTDLDNGNYTV-EFETPAGYTPTVKNTTADDKDSNGLTTTGVIKDADNMTLDR--YDSNKDGKQIKDVTVTLQNEKGEVI-GTTKTDENGKYRFDNLDSGKYKV-IFEKPAGLT-DADGGEVDVTITDHDDFTLDNGYFEEDTSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD............................................................................................................................................................................................... 1008
21 -18.900IDP06525 gene: fms17; LPXTG family cell surface protein Fms17 [Enterococcus faecium DO] AFK58157 [Enterococcus faecium DO]  ali follow..  11  32.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GEDVVEFVLHKDIDYNDQFEYHENDGLAISEEAGETADIISQTVPLNGATFAI--------------------------------------YDMTDYYHEKKAAENMTPKEFV----------QIAETNRNNIRQLITEERLVQIGTSVTTGKDTVGGLGDGIARIKQDRDAVYLIFEESIDPEVGLDVDIDQTAITESTEELQEIHIYPKNVGYLRDPYFFKYGTTEKGKPLEGAVFALYQNDKNVSKFISDKEGLVTTGQLPSGTYYFEELKGVEGYEMDEASKRIEVIIPEFWVDAKGQPQYVVVNGQEMAELESGKVPVSAYESATPRVYNET------------------------------------------------------------------------VKETTDKPKEPSGPSNPGQSGKWSVFPQTNEARTLISLLGILLLLGAVLLIKKERGE 434
22 -14.800IDP06529 gene: acm; collagen-binding MSCRAMM Acm (Fms8) [Enterococcus faecium DO] AFK59905 [Enterococcus faecium DO]  ali follow..  11  25..............................................................................................................................................................................................................................................................................................................................HVYADAGRDISSNVTSLTVDPTNITDGGNIKVKFSFDEKKQNIQPGDYLWILMIENKNVGTLTVRKDSQVVFNE---GWGQFEIQARNVTDTGEENTGPFTVTSGDTATVNVTKPASGSSSSVFYYKTGDMLPEDTKHIRWFLINNNGTYVEQPVKISDEIQSGQRLDPSTFEINQIHLGEQFSVTDNYIEITIPKNFVNLRKIMVSYKNGTVRGELKIFKYINDT-EIGIPNVTFELRRQGQSSILLTSNEQGEASIKGLQVGDYVVKEKEAPNWIDFDPLSSNEL-ENDTEGVSLPIYNKKKVTNITATKIGGTTPRPSIYFKLFRASTNNWEPVPDKRLDNGITSVTWEDIQ-GNFKVQEVDQN-GND--------YVPSGYQKIENGLVVTNENKEVISVSGQKTNENQDGKRPTTITVNLLADGQPIQEVSEKDDWRYRFTNLP-GQYTVTEDNVP-EYSTTIDGYNIKNSYTPEKTNISIPGSHITP--------WKNFPEKTEREKIRNLFSQKLQIFAHTGESSEQR-----------SNYISKRAVPK-----------------------------------------------------QITNKSKSILPKTSSKKSSFAVIGLLIVTICAGIFLQKYKK 720
23 -13.800IDP93937 adhesin [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005042 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  14  642...................................................................................................................................................................................................................................................................................................................................................TNATDKTKLEVQVTDALGH--PVPGVEVTWVSDLNSPGVTSITNEHGENNFSSTVTGTANIT-VQVGTSAPVQAGKIEIKADNSTMTVNASDFTNGTSKAVYKLKVMDK-QGNVVPGAAVDWLSNIGTFVSTTTTDTNGFIELVSTKAETAKV--TATVGGKPYNAGKVVFVADRQSGKITLLPVSKNTAAANGTLNAKILDAN--GNPIKNEEIEWDAASHKVTKTQTNDLGQITLTSTDVGDITLNAQVVKNNLLVNQAGEKLSFTADTVTANISIADGQAQVIYKVVVKDK--NGHVVPNSPVLWETNLGEFVPAQATTDSQGTVVLASIKAGSATVK-ASVNANKDTSPTQVEFTADSSTATIAITPVTKQVYVANGSYAVTVLDAN--NNPVKAEAINWKSENGEPAPSQTDGQGTVSIGSVKAGDTQIRATLGNNATAIADAITFEADRQTAVVKTVEVTGSKVTAPDGTGSISTVVDANGNPVSGMILSWGSNINNVANPSTTTDINGQSSQT.............................................................................................................. 1208
24 -13.800IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  10  647..........................................................................................................................................................................................................................................................................................................................................HTSDVTVNYVYKLTDLKLTSTYKDAQGTELK-IQDNYATTAAPGYTLVATPANQSGTFGSTDIQV-NYVYQAVAYKPGYTLVAAPTNQTGTFGASDV-TVNYVYKANDYTLTSTYKDAQGKETIPGYTLVVYKADDYTLTSTYKDANGKELKAPVVTKDNYSTSAATIPGYTLVAAPANQTGTFNTSNV---TVNYFYKANEYTLTSTFKNVQTSGVTIPGVNYVYKANGYALITTYKDTQGKDLKPL-NINDPYTATALNIPGYTLTTTPANEKGVFGASDETVNYVYKANDYTLTTTYKDA-----------------NGKELQAPKVDAKTYHI-------QDTYKTTAAVIPGYTLVAIPKNDQGTFGANNV---TVNYVYQTNDYTLTATFKDAQGNELKATEVDAQKYHIHDTYTSKAAVIPG-----------YTLEKTPTNETGTFNASDIQVNYVYKANDYQLTS------------------------------TFKDQQGNEIALPTVDAKTYHI-------HEAYTTKARLIPGYSLVAAPKN-AFGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKV---IKTKVVKQTLPKTGDDGLLNLLRLIGLVLILGVFLAVGSKK 1346
25 -13.600IDP93874 putative adhesin [Yersinia enterocolitica subsp. enterocolitica WA-314] EKA29148 [Yersinia enterocolitica subsp. enterocolitica WA-314]  ali follow..  12  641..................................................................................................................................................................................................................................................................................................................................................TTNATDKTKLEVLVTDALGH--PVPGVEVKWVSDLKSPGAISITNEHGENNFSSTVTGTANIT-VQVGTEAPVQAGAIEIKADNSTMTVKANDFTDGTSKAVYKLKVTDK-QGNVVPGAAVEWSSNIGSFVSSTTTDTNGFIELVSTKAETAKV--TATVGGKPYNAGKVVFVADRQSGKITLLPVSKNSAAANGTLNAKILDAN--GNPIKNEEIEWDAASHKVTKTQTNDLGQITLTSTDVGDITLNAQVVKNNLLVNQASEKLSFTADTVTANISIADGQSQVIYKVVVKDK--NGHVVANSPVLWETNLGEFVPAQTSTNSQGTVVLASIKAGFATVK-ASVNGNKNTSPTQVEFTANRSTAKITLAPMTQRDFVANDTYSVTVVDAN--NNPVKAEAISWKAENGH-ASSQTDEQGTVNIGSVKAGKTQIRATLGNAATAIADAITFEADRKTAVIKTVEVKGDNKPAPDGSSSVSTVVDANGNPVGGMTLSWDSNINKIASQITTTDINGQSSQT.............................................................................................................. 1208
26 -13.200IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  15 1193..........................................................................................................................................................................................................................................................................................................................................................EITYPKFDEVSEAEFLNDIHATISDKNVAITSNFST------DVNLNKAGDYTVTLNATEDGVKATPVEVIVHVQQGERPVITADAT-------ISYDKFANITEAKF--EDIHATSSDGQSSTVITSNFQTATNFK--TAMSYTVTLNAVNDGISAEPVAVTVTINKEPAAALKADA---------EVSYAKNEAVTESDFFKDVH---LEGTEAPSTAKATSNFDSVVDRSKTGDYTVTINATEDGAVSTPIEVIVHIEAESAPV--------ITANAEVKYNKHEQTDER-------LYDSEAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATEDGQAANPVEVSVIVSDAAAEKVNVKYV-----------------DENGSEISAAETLTGNLDETFSIDAKSIAG--KCDATLSGVFSTVEQTVVFHYK-AIKPGVVTIKYEDTNGKAVDEDKQITGEVGDDFEAEAQTVSGYSCRAIASGKITEEPQTITFTYSTDESGKKLADSKKIDDSYSVEAKAIEGYSVVGDDSAKGVFTEKSQTVTFKYKKNTQVSKDDPKVKGKTNQPSSTD----TKLKVDNNSLPATGDTENLAVLIGFNMLIVASIFLFRKPKT 1776
27 -12.300IDP04348 two component regulator [Clostridium perfringens ATCC 13124] CPF_2547 [Clostridium perfringens ATCC 13124]  ali follow..  11  51..........................................................................................................................................................................................................................................................................................EKGNEFIWNPKEDGEYMIMVQGRKEDSNKPFDYKVTEGVNVKRTVHGLQDEMNKDEINKDEIKEEKLIKGIYLNKDVFNVENIMYRYFISGKNGWQLIKDTLENKLNYTINESGQFEFLECKKTSSTNTTDDYATVIFTSKEFVKPEIINFINLSESELTFEVEANFEDERTALYKFVKISPDGSRTCIQDFSSSRIVTFKEFKEGRYKLLLIRDMYSNKEFDDRAVMVYDIKPYEPLQLRSFTTDLSSPEVIEIKAVIDGG-----SDILYRFKIDGEISEDTGYTRNSTLKWNAKKEGNYRIKDESFIGDYE-IESKLDYKIEKKVKKPIKITELIFDRDVIKLRVSAEGGT-----DLKYSFLIIKDGKTIESIDFGSNNWVEFIPNEKGNYQLVRVKDKYSTKEYDVHTVLNFKVREYAEGKIDHILVPAKEYDDIDIEVIVQNTRQVKVK---YVTKVNGQVVEETDYVKNKRFKVTPKCPGKYTIRNIKCKEGFD-SRREVRFYVSEALPITGTKISTSDKVFKINEEINFSTKCEGGS---RVCYEYYIMVNGNWSLVQKYSRKSYYSFRPYVPGKYKVKSYYKKCAYE-DYDTFEFKVE................................................................................ 686
28 -11.900IDP01769 putative inner membrane lipoprotein [Salmonella typhimurium LT2] STM2532 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  188..........................................................................................................................................................................................................................................................................................................................................................DVNFFRVKPGS-ADLVYTGRFDLNPARNTREKLLLPLSD---IKPLQQAGVYVA-VMNQAGHYNYSNAATLFTLSD-------IGVSAHRYHNRLDIFTQSLENGAAQSGIEIVLLNDKGQTLAQATSDAQGHVQLEADKAAALLLARKEEQTTLLLDLSEFNVAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDSDGKTLPDVKLEVVKPDGQVMRVSQPENGLYRLNNAPTGLWHVRNLLRSWDFHVEDERMALNLTAQADEVKFSVVGYYLYGQGQLFLRPLRDAVAALPGFQFGNIAEENLSRSLDETLDKGGRGEVS-----QASLLEVTRRVEQAIWPADTLPGIRPQFATDTTVNQPIVDEDSNAAFDIVYANAQGEKKAVSGLQVRLIRER-GEQTLDLNADETKVSFPVEWGAYRLEVKAPNETVSSVRFWAGYSWQDNSDG------SGAARPDRVTLKLDKANYRPGDPVAGKGYAMVESSDGPLWWQAIDVPAQGLEL-----------TIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGLLHLPLGDDNRRLDLALESPAKMRPNQPLTVRVKASVKHGEMPKQINVLVSAVDSGVLNITDYA 902
29 -11.100IDP91662 gene: CDH1; cadherin-1 preproprotein [Homo sapiens] NP_004351 [Homo sapiens]  ali follow..  9  12.....................................................................................................................................................................................................................................................................................................................LLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDCTGRQRTAYFSL-------DTRFKVGTDGVITVKRFHNPQIHFLVYAWDST-QASVSGIQAELLTFPNSSPGLR-ENEKGPFPKNLVQIKSNKDKE-GKVFYSITGQGADTPPVIIERETGWLKVTE-RIATYTLFSHAVSSNGNAVEDPMEILITVTDQTQEVFKGSVMEGALPGTMEVTATDADDDVNTYNAIAYTILSQDPELPDTINRNTGVISVVT-SFPTYTLVVQAADLQGEGLSTTATAVIT-NPTTYKGQVPENEANVVITLKVTDADAPNTPAWEAVYTILNDDGGQFVTTNPVNNDGILKTAK-AKQQYILHVVPFEVSLTTSTATVTVDVLDVNEAPPEKRVEVSEDFGVGQTSYTAQEPDTFME--QKITYRIWRDTANWLEI-NPDTGAISTRAVKNSTYTALIIATDNGSPVATGTGTLLLINDNAPIPEPRTIFFCERNPKPQVINIIDADLPPNTSPFTAELTHGASANWTIQYNDPTQESIILKPKEVGDYKINLKLMDNQNKDQVTTLEVSVCDCEGA........................................................................... 691
30 -10.900IDP91527 gene: etpA; EtpA [Escherichia coli ETEC H10407] AAX13509 [Escherichia coli ETEC H10407]  ali follow..  11  70...................................................................................................................................................................................................................................................................................................................................................................................TGGQIVA-------GSGSIQTPSGNQMNIHQNS--QNMVAN---NSFDIGKGNTVQFD-----QPSSSAVALNRVVGGGESQIMG---NL-------------KANGQV---------FLVN----PNGVLFGEGA---SVSTSG--------------VASTRDIKNDD-------MNR-RYTFSGGQKAGAAIVN--QGELTTNA---GYIVLA-IRTPGGKTVLAASERITLQLDNGLMSVQVTGDVVNALV------ENRGLVSARDGQVYLTALGRGMLMNTVL-NVSGVVEASGM----------HRQDG--------NIVLDGGDSGVVHLS---------GTLQADNASGQGGKVVVQGKNILL-DKGSNITATGGQGGGEVYVG----GGWQGKDSNIRNA--------KVVMQGGAR-------------------IDVSATQQGN---GGTAVLWSDS--------YTNFHGQISAKG---GNGGRVETSAKKGWLLDSADITIVNGSNVSKTETTQSPPHTQFAPTAAGSAVSNTSINNRLNNGTSVTILTHRTRTGTAQGGNITV.................... 527
31 -9.920IDP04163 sensory box sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC1349 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  584....................................................................................................................................................................................................................................................................................................................................................TERKEMEDELRKAKEAADAMSQAKGDF------ANMSHEIRTPMNAILGMAHLALNTYVILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRL----GQVMVNLCGNSQGEIVLS-----RFAVKDT----GIGIAQDKLDDLFDA----------------------FSQADNSITRQ--TGLGLSISKQ----------------LVELMGGQITV-HSEEGKG---STFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSAR-------HILDSLLTAMRFNVVTVSNGFEALSEIQQKPFLFVDWNMPNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGEN--IVKEAHHNSRPNFAGQSLLLVEDNEVNQEVALGNHGQEALERLEHADFVLMDMQMPDGITATEH...................................................................................................................................................................................... 1056
32 -9.430CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  14 1036............................................................................................................................................................................................................................................................................................................................................................QITDIDPLKNLTNLNRLEL-----SSNTISDISA--SGLTSLQQLSFGNQVLANLTTLERLDISSNKVSISVLAKLTNLESLIATNNQI-SDITLTNLDE-NGNQLKGTLASLTNTDLDLANNQISN-SGLTKLTELKLGANQISNISPLAGLTALTN---LELNENQLEDISPISNLKNLTYLT--NISDISPVSSLTKLQRLFF-----NNKVSDVSSLAN-LTNINWLSAGHNQISDTNAPVNYKANVS-APATISDGGSYTEPDITSYTFSQPVTIGKGTTTFSGTVTQ-AIFNVK-------------HVDGKETTKEVEAGN-LLTEPAKPEGHTF------FDAQTGGT--------------KWNFSTDKMPTNDIN-----AQFSINS------TATFDNDGVTTSQTV---DYQLQEPTAPEGYTFKGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGKEPKAPTKAGYTFKGWYDEKTDGKFATDKMPANDITL--TKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSDTS----NTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLLLGLLAVGTAMALTKKAR. 1680
33 -9.350IDP04415 gene: icsA (virG); IcsA (VirG), outermembrane protein exposed to the bacterial surface by a C-terminal autotransporter domain and involved in the movement of intracellular bacteria by binding to N-WASP [Shigella flexneri] CAC05837 [Shigella flexneri]  ali follow..  12  608................................................................................................................................................................................................................................................................................................................................................................VIVTGNMTLEKNGHVILNNSSSNVGQTYVQK------------GNWH-----GKGGILS----LGAVLGNDNSKTDRLEIAHASGITYVAVTNEGGSGDKTLEG--VQIISTDSS--------DKNAFIQKGIVAGDYRLKQTWRPESYIANLIAMNTMFSPSNLADRQLKTTANRMVYQIGGDILKTNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLY-FQDEKERTGYM------------DAWLQYSWFNNTVKGDGLTGEKYSSKGITGALEGYIYPTIRWTAHNIDNALYLNPQVQITRHGVKANDY--IEHNGTMGLRTSLI----QSCIDKETLRKFESSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSI---------GNVSQQ---LGNNSYRDTQGILGVKYT........................................................................................................................................................................................ 1101
34 -9.230IDP06489 gene: A25R; A25R [Monkeypox virus Zaire-96-I-16] NP_536562 [Monkeypox virus Zaire-96-I-16]  ali follow..  9  723...........................................................................................................................................................................................................................................................................................................................................................................................VISKALETSKIAANCFGQHVTIALMSYKGINQEDG-----IIKKQFIQRGGLDIVTAKKHQVEIPLENFNNKERDRSNAYSKLESNG-LVRLNAFLESGDAMARNISS-NQISFDVSEKYTDMYKSRVERVQVELTDKVKVRVLTMKERRPILGD----KFTTRTSQKGTVAYIAD-YDENGITPDVIINSTSI---SRKTIS--MLIEAYSTKPYNNKGENRPVCFPSSNETSIDAYMQFAKQC------YEYSNPKLSEEELSDKIFCEK------ILYDPETDKPYESKVFFGPIYYLRLR----HLTQDK---ATVRCRGKKTKLIRQANEGRKRGGGIKFGEMERD-------GAANTITEEEDYQDVYICENCGDIAAQIKSINT-LLTKIDTTHVSQMNARGVKVKLDFERRPPSFYKPLDKVDLKPSFLV........................................................................................................................................................ 1164
35 -9.110IDP90302 sensory transduction histidine kinase, putative [Borrelia burgdorferi B31] BB_0420 [Borrelia burgdorferi B31]  ali follow..  11  741....................................................................................................................................................................................................................................................................................................................................................FEQKRRYSFVMNEKKIAEAANAAKTIF------ANVSHDIRTPINGIMAATEL------LDTTI------LTDVQKDYVRMINYSSDSLLSLIDD-----LYLSKIDV-NELYVESQEIDLESEMEMVLKAFQCAKKNIDLFSYSKSGD-KIKQVLI----NLIGNAFKFTDDGVIVLNYEEVCRTRTDGNRVLVTV-EFKVIDTGKGIEKENFSIFEIFKQEDDSSSRVHE--ELIRLMGGLGIAVDSKVGEG-----TTFSFMLSELKSKKLSINRFQSVNGDNKVLNVLLSQKSIKIFEHCSILLGCSSN--VRYVASFEDAYKVFKKYPSYNFVYINVNNDEGIRLANSILYKKEFNPEMDFEDLVPIDSALRIKEPINVLIAEDNQVNQKV--LKDILVVIGINENFIDVVDDGVKALKSLKDKKYSFIDIRMPDGFSVAKEIRKFEKAKNLKPCVLVAVTAHA................................................................................................................................................................ 1245
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 2 8 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.